LOCUS       XM_047419247            5019 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PR/SET domain 1 (PRDM1), transcript variant
            X5, mRNA.
ACCESSION   XM_047419247
VERSION     XM_047419247.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5019
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..5019
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /note="PR/SET domain 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 11 ESTs, 303 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 54 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
     CDS             219..2567
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /codon_start=1
                     /product="PR domain zinc finger protein 1 isoform X4"
                     /protein_id="XP_047275203.1"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
                     /translation="MLDICLEKRVGTTLAAPKCNSSTVRFQGLAEGTKGTMKMDMEDA
                     DMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSVQAEASLPRNLLFKYATNSEEVIGVM
                     SKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWMR
                     YVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTM
                     MNLTQTQSSLKQPSTEKNELCPKNVPKREYSVKEILKLDSNPSKGKDLYRSNISPLTS
                     EKDLDDFRRRGSPEMPFYPRVVYPIRAPLPEDFLKASLAYGIERPTYITRSPIPSSTT
                     PSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLGSYPGY
                     APLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGLFPRLCPVYSNL
                     LGGGSLPHPMLNPTSLPSSLPSDGARRLLQPEHPREVLVPAPHSAFSFTGAAASMKDK
                     ACSPTSGSPTAGTAATAEHVVQPKATSAAMAAPSSDEAMNLIKNKRNMTGYKTLPYPL
                     KKQNGKIKYECNVCAKTFGQLSNLKVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAK
                     FTQFVHLKLHKRLHTRERPHKCSQCHKNYIHLCSLKVHLKGNCAAAPAPGLPLEDLTR
                     INEEIEKFDISDNADRLEDVEDDISVISVVEKEILAVVRKEKEETGLKVSLQRNMGNG
                     LLSSGCSLYESSDLPLMKLPPSNPLPLVPVKVKQETVEPMDP"
ORIGIN      
        1 aacacagaca aagtgctgcc gtgacactcg gccctccagt gttgcggaga ggcaagagca
       61 gcgaccgcgg cacctgtccg cccggagctg ggacgcgggc gcccgggcgg ccggacgaag
      121 cgaggaggga ccgccgaggt gcgcgtctgt gcggctcagc ctggcggggg acgcggggag
      181 aatgtggact gggtagagat gaacgagact tttctcagat gttggatatt tgcttggaaa
      241 aacgtgtggg tacgaccttg gctgccccca agtgtaactc cagcactgtg aggtttcagg
      301 gattggcaga ggggaccaag gggaccatga aaatggacat ggaggatgcg gatatgactc
      361 tgtggacaga ggctgagttt gaagagaagt gtacatacat tgtgaacgac cacccctggg
      421 attctggtgc tgatggcggt acttcggttc aggcggaggc atccttacca aggaatctgc
      481 ttttcaagta tgccaccaac agtgaagagg ttattggagt gatgagtaaa gaatacatac
      541 caaagggcac acgttttgga cccctaatag gtgaaatcta caccaatgac acagttccta
      601 agaacgccaa caggaaatat ttttggagga tctattccag aggggagctt caccacttca
      661 ttgacggctt taatgaagag aaaagcaact ggatgcgcta tgtgaatcca gcacactctc
      721 cccgggagca aaacctggct gcgtgtcaga acgggatgaa catctacttc tacaccatta
      781 agcccatccc tgccaaccag gaacttcttg tgtggtattg tcgggacttt gcagaaaggc
      841 ttcactaccc ttatcccgga gagctgacaa tgatgaatct cacacaaaca cagagcagtc
      901 taaagcaacc gagcactgag aaaaatgaac tctgcccaaa gaatgtccca aagagagagt
      961 acagcgtgaa agaaatccta aaattggact ccaacccctc caaaggaaag gacctctacc
     1021 gttctaacat ttcacccctc acatcagaaa aggacctcga tgactttaga agacgtggga
     1081 gccccgaaat gcccttctac cctcgggtcg tttaccccat ccgggcccct ctgccagaag
     1141 actttttgaa agcttccctg gcctacggga tcgagagacc cacgtacatc actcgctccc
     1201 ccattccatc ctccaccact ccaagcccct ctgcaagaag cagccccgac caaagcctca
     1261 agagctccag ccctcacagc agccctggga atacggtgtc ccctgtgggc cccggctctc
     1321 aagagcaccg ggactcctac gcttacttga acgcgtccta cggcacggaa ggtttgggct
     1381 cctaccctgg ctacgcaccc ctgccccacc tcccgccagc tttcatcccc tcgtacaacg
     1441 ctcactaccc caagttcctc ttgcccccct acggcatgaa ttgtaatggc ctgagcgctg
     1501 tgagcagcat gaatggcatc aacaactttg gcctcttccc gaggctgtgc cctgtctaca
     1561 gcaatctcct cggtgggggc agcctgcccc accccatgct caaccccact tctctcccga
     1621 gctcgctgcc ctcagatgga gcccggaggt tgctccagcc ggagcatccc agggaggtgc
     1681 ttgtcccggc gccccacagt gccttctcct ttaccggggc cgccgccagc atgaaggaca
     1741 aggcctgtag ccccacaagc gggtctccca cggcgggaac agccgccacg gcagaacatg
     1801 tggtgcagcc caaagctacc tcagcagcga tggcagcccc cagcagcgac gaagccatga
     1861 atctcattaa aaacaaaaga aacatgaccg gctacaagac ccttccctac ccgctgaaga
     1921 agcagaacgg caagatcaag tacgaatgca acgtttgcgc caagactttc ggccagctct
     1981 ccaatctgaa ggtctgccac aagagattta gcagcaccag caatctcaag acccacctgc
     2041 gactccattc tggagagaaa ccataccaat gcaaggtgtg ccctgccaag ttcacccagt
     2101 ttgtgcacct gaaactgcac aagcgtctgc acacccggga gcggccccac aagtgctccc
     2161 agtgccacaa gaactacatc catctctgta gcctcaaggt tcacctgaaa gggaactgcg
     2221 ctgcggcccc ggcgcctggg ctgcccttgg aagatctgac ccgaatcaat gaagaaatcg
     2281 agaagtttga catcagtgac aatgctgacc ggctcgagga cgtggaggat gacatcagtg
     2341 tgatctctgt agtggagaag gaaattctgg ccgtggtcag aaaagagaaa gaagaaactg
     2401 gcctgaaagt gtctttgcaa agaaacatgg ggaatggact cctctcctca gggtgcagcc
     2461 tttatgagtc atcagatcta cccctcatga agttgcctcc cagcaaccca ctacctctgg
     2521 tacctgtaaa ggtcaaacaa gaaacagttg aaccaatgga tccttaagat tttcagaaaa
     2581 cacttatttt gtttcttaag ttatgacttg gtgagtcagg gtgcctgtag gaagtggctt
     2641 gtacataatc ccagctctgc aaagctctct cgacagcaaa tggtttcccc tcacctctgg
     2701 aattaaagaa ggaactccaa agttactgaa atctcagggc atgaacaagg caaaggccat
     2761 atatatatat atatatatat ctgtatacat attatatata cttatttaca cctgtgtcta
     2821 tatatttgcc cctgtgtatt ttgaatattt gtgtggacat gtttgcatag ccttcccatt
     2881 actaagacta ttacctagtc ataattattt tttcaatgat aatccttcat aatttattat
     2941 acaatttatc attcagaaag caataattaa aaaagtttac aatgactgga aagattcctt
     3001 gtaatttgag tataaatgta tttttgtctt gtggccattc tttgtagata atttctgcac
     3061 atctgtataa gtacctaaga tttagttaaa caaatatatg acttcagtca acctctctct
     3121 ctaataatgg tttgaaaatg aggtttgggt aattgccaat gttggacagt tgatgtgttc
     3181 attcctggga tcctatcatt tgaacagcat tgtacataac ttgggggtat gtgtgcagga
     3241 ttacccaaga ataacttaag tagaagaaac aagaaaggga atcttgtata tttttgttga
     3301 tagttcatgt ttttccccca gccacaattt taccggaagg gtgacaggaa ggctttacca
     3361 acctgtctct ccctccaaaa gagcagaatc ctcccaccgc cctgccctcc ccaccgagtc
     3421 ctgtggccat tcagagcggc cacatgactt ttgcatccat tgtattatca gaaaatgtga
     3481 agaagaaaaa aatgccatgt tttaaaacca ctgcgaaaat ttccccaaag cataggtggc
     3541 tttgtgtgtg tgcgatttgg gggcttgagt ctgggtggtg ttttgttgtt ggtttttgtt
     3601 gctttttttt tttttttttt tttaatgtca aaattgcaca aacatggtgc tctaccagga
     3661 aggattcgag gtagataggc tcaggccaca ctttaaaaac aaacacacaa acaacaaaaa
     3721 acgggtattc tagtcatctt ggggtaaaag cgggtaatga acattcctat ccccaacaca
     3781 tcaattgtat tttttctgta aaactcagat tttcctcagt atttgtgttt ttacatttta
     3841 tggttaattt aatggaagat gaaagggcat tgcaaagttg ttcaacaaca gttacctcat
     3901 tgagtgtgtc cagtagtgca ggaaatgatg tcttatctaa tgatttgctt ctctagagga
     3961 gaaaccgagt aaatgtgctc cagcaagata gactttgtgt tattctatct tttattctgc
     4021 taagcccaaa gattacatgt tggtgttcaa agtgtagcaa aaaatgatgt atatttataa
     4081 atctatttat accactatat catatgtata tatatttata accacttaaa ttgtgagcca
     4141 agccatgtaa aagatctact ttttctaagg gcaaaaaaaa aaaaaaaaaa aaaagaacac
     4201 tcctttctga gactttgctt aatacttggt gacctcacaa tcacgtcggt atgattgggc
     4261 acccttgcct actgtaagag accctaaaac cttggtgcag tggtggggac cacaaaacaa
     4321 ccagggagga agagatacat cattttttag tattaaggac catctaagac agctctattt
     4381 tttttttgcc actttatgat tatgtggtca cacccaagtc acagaaataa aaaactgact
     4441 ttaccgctgc aatttttctg ttttcctcct tactaaatac tgatacatta ctccaatcta
     4501 ttttataatt atatttgaca ttttgttcac atcaactaat gttcacctgt agaagagaac
     4561 aaatttcgaa taatccaggg aaacccaaga gccttactgg tcttctgtaa cttccaagac
     4621 tgacagcttt ttatgtatca gtgtttgata aacacagtcc ttaactgaag gtaaaccaaa
     4681 gcatcacgtt gacattagac caaatacttt tgattcccaa ctactcgttt gttctttttc
     4741 tccttttgtg ctttcccata gtgagaattt ttataaagac ttcttgcttc tctcaccatc
     4801 catccttctc ttttctgcct cttacatgtg aatgttgagc ccacaatcaa cagtggtttt
     4861 attttttcct ctactcaaag ttaaaactga ccaaagttac tggcttttta ctttgctaga
     4921 acaacaaact atcttatgtt tacatactgg tttacaatgt tatttatgtg caaattgtca
     4981 aaatgtaaat taaatataaa tgttcatgct ttaccaaaa
//
