LOCUS       XM_011536062            5065 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PR/SET domain 1 (PRDM1), transcript variant
            X1, mRNA.
ACCESSION   XM_011536062
VERSION     XM_011536062.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011536062.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5065
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..5065
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /note="PR/SET domain 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 10 ESTs, 166 long
                     SRA reads, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 35 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
     CDS             94..2613
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /codon_start=1
                     /product="PR domain zinc finger protein 1 isoform X1"
                     /protein_id="XP_011534364.1"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
                     /translation="MTPGILGHWTVCPEHFSAMRGKARDCSEAAPKCNSSTVRFQGLA
                     EGTKGTMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSVQAEASLPRNLL
                     FKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSRGELHH
                     FIDGFNEEKSNWMRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDF
                     AERLHYPYPGELTMMNLTQTQSSLKQPSTEKNELCPKNVPKREYSVKEILKLDSNPSK
                     GKDLYRSNISPLTSEKDLDDFRRRGSPEMPFYPRVVYPIRAPLPEDFLKASLAYGIER
                     PTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLN
                     ASYGTEGLGSYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINN
                     FGLFPRLCPVYSNLLGGGSLPHPMLNPTSLPSSLPSDGARRLLQPEHPREVLVPAPHS
                     AFSFTGAAASMKDKACSPTSGSPTAGTAATAEHVVQPKATSAAMAAPSSDEAMNLIKN
                     KRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNK
                     GFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKF
                     TQFVHLKLHKRLHTRERPHKCSQCHKNYIHLCSLKVHLKGNCAAAPAPGLPLEDLTRI
                     NEEIEKFDISDNADRLEDVEDDISVISVVEKEILAVVRKEKEETGLKVSLQRNMGNGL
                     LSSGCSLYESSDLPLMKLPPSNPLPLVPVKVKQETVEPMDP"
ORIGIN      
        1 attcagaggc agacagagct ccttcctctt cctctccttg tttgtgacac ttttctgagg
       61 cagcttttcc acagtgccga gggtctggcg gccatgaccc caggcattct gggacactgg
      121 actgtgtgcc cagaacattt ttctgccatg agaggtaaag ccagggattg ttcagaggct
      181 gcccccaagt gtaactccag cactgtgagg tttcagggat tggcagaggg gaccaagggg
      241 accatgaaaa tggacatgga ggatgcggat atgactctgt ggacagaggc tgagtttgaa
      301 gagaagtgta catacattgt gaacgaccac ccctgggatt ctggtgctga tggcggtact
      361 tcggttcagg cggaggcatc cttaccaagg aatctgcttt tcaagtatgc caccaacagt
      421 gaagaggtta ttggagtgat gagtaaagaa tacataccaa agggcacacg ttttggaccc
      481 ctaataggtg aaatctacac caatgacaca gttcctaaga acgccaacag gaaatatttt
      541 tggaggatct attccagagg ggagcttcac cacttcattg acggctttaa tgaagagaaa
      601 agcaactgga tgcgctatgt gaatccagca cactctcccc gggagcaaaa cctggctgcg
      661 tgtcagaacg ggatgaacat ctacttctac accattaagc ccatccctgc caaccaggaa
      721 cttcttgtgt ggtattgtcg ggactttgca gaaaggcttc actaccctta tcccggagag
      781 ctgacaatga tgaatctcac acaaacacag agcagtctaa agcaaccgag cactgagaaa
      841 aatgaactct gcccaaagaa tgtcccaaag agagagtaca gcgtgaaaga aatcctaaaa
      901 ttggactcca acccctccaa aggaaaggac ctctaccgtt ctaacatttc acccctcaca
      961 tcagaaaagg acctcgatga ctttagaaga cgtgggagcc ccgaaatgcc cttctaccct
     1021 cgggtcgttt accccatccg ggcccctctg ccagaagact ttttgaaagc ttccctggcc
     1081 tacgggatcg agagacccac gtacatcact cgctccccca ttccatcctc caccactcca
     1141 agcccctctg caagaagcag ccccgaccaa agcctcaaga gctccagccc tcacagcagc
     1201 cctgggaata cggtgtcccc tgtgggcccc ggctctcaag agcaccggga ctcctacgct
     1261 tacttgaacg cgtcctacgg cacggaaggt ttgggctcct accctggcta cgcacccctg
     1321 ccccacctcc cgccagcttt catcccctcg tacaacgctc actaccccaa gttcctcttg
     1381 cccccctacg gcatgaattg taatggcctg agcgctgtga gcagcatgaa tggcatcaac
     1441 aactttggcc tcttcccgag gctgtgccct gtctacagca atctcctcgg tgggggcagc
     1501 ctgccccacc ccatgctcaa ccccacttct ctcccgagct cgctgccctc agatggagcc
     1561 cggaggttgc tccagccgga gcatcccagg gaggtgcttg tcccggcgcc ccacagtgcc
     1621 ttctccttta ccggggccgc cgccagcatg aaggacaagg cctgtagccc cacaagcggg
     1681 tctcccacgg cgggaacagc cgccacggca gaacatgtgg tgcagcccaa agctacctca
     1741 gcagcgatgg cagcccccag cagcgacgaa gccatgaatc tcattaaaaa caaaagaaac
     1801 atgaccggct acaagaccct tccctacccg ctgaagaagc agaacggcaa gatcaagtac
     1861 gaatgcaacg tttgcgccaa gactttcggc cagctctcca atctgaaggt ccacctgaga
     1921 gtgcacagtg gagaacggcc tttcaaatgt cagacttgca acaagggctt tactcagctc
     1981 gcccacctgc agaaacacta cctggtacac acgggagaaa agccacatga atgccaggtc
     2041 tgccacaaga gatttagcag caccagcaat ctcaagaccc acctgcgact ccattctgga
     2101 gagaaaccat accaatgcaa ggtgtgccct gccaagttca cccagtttgt gcacctgaaa
     2161 ctgcacaagc gtctgcacac ccgggagcgg ccccacaagt gctcccagtg ccacaagaac
     2221 tacatccatc tctgtagcct caaggttcac ctgaaaggga actgcgctgc ggccccggcg
     2281 cctgggctgc ccttggaaga tctgacccga atcaatgaag aaatcgagaa gtttgacatc
     2341 agtgacaatg ctgaccggct cgaggacgtg gaggatgaca tcagtgtgat ctctgtagtg
     2401 gagaaggaaa ttctggccgt ggtcagaaaa gagaaagaag aaactggcct gaaagtgtct
     2461 ttgcaaagaa acatggggaa tggactcctc tcctcagggt gcagccttta tgagtcatca
     2521 gatctacccc tcatgaagtt gcctcccagc aacccactac ctctggtacc tgtaaaggtc
     2581 aaacaagaaa cagttgaacc aatggatcct taagattttc agaaaacact tattttgttt
     2641 cttaagttat gacttggtga gtcagggtgc ctgtaggaag tggcttgtac ataatcccag
     2701 ctctgcaaag ctctctcgac agcaaatggt ttcccctcac ctctggaatt aaagaaggaa
     2761 ctccaaagtt actgaaatct cagggcatga acaaggcaaa ggccatatat atatatatat
     2821 atatatctgt atacatatta tatatactta tttacacctg tgtctatata tttgcccctg
     2881 tgtattttga atatttgtgt ggacatgttt gcatagcctt cccattacta agactattac
     2941 ctagtcataa ttattttttc aatgataatc cttcataatt tattatacaa tttatcattc
     3001 agaaagcaat aattaaaaaa gtttacaatg actggaaaga ttccttgtaa tttgagtata
     3061 aatgtatttt tgtcttgtgg ccattctttg tagataattt ctgcacatct gtataagtac
     3121 ctaagattta gttaaacaaa tatatgactt cagtcaacct ctctctctaa taatggtttg
     3181 aaaatgaggt ttgggtaatt gccaatgttg gacagttgat gtgttcattc ctgggatcct
     3241 atcatttgaa cagcattgta cataacttgg gggtatgtgt gcaggattac ccaagaataa
     3301 cttaagtaga agaaacaaga aagggaatct tgtatatttt tgttgatagt tcatgttttt
     3361 cccccagcca caattttacc ggaagggtga caggaaggct ttaccaacct gtctctccct
     3421 ccaaaagagc agaatcctcc caccgccctg ccctccccac cgagtcctgt ggccattcag
     3481 agcggccaca tgacttttgc atccattgta ttatcagaaa atgtgaagaa gaaaaaaatg
     3541 ccatgtttta aaaccactgc gaaaatttcc ccaaagcata ggtggctttg tgtgtgtgcg
     3601 atttgggggc ttgagtctgg gtggtgtttt gttgttggtt tttgttgctt tttttttttt
     3661 ttttttttta atgtcaaaat tgcacaaaca tggtgctcta ccaggaagga ttcgaggtag
     3721 ataggctcag gccacacttt aaaaacaaac acacaaacaa caaaaaacgg gtattctagt
     3781 catcttgggg taaaagcggg taatgaacat tcctatcccc aacacatcaa ttgtattttt
     3841 tctgtaaaac tcagattttc ctcagtattt gtgtttttac attttatggt taatttaatg
     3901 gaagatgaaa gggcattgca aagttgttca acaacagtta cctcattgag tgtgtccagt
     3961 agtgcaggaa atgatgtctt atctaatgat ttgcttctct agaggagaaa ccgagtaaat
     4021 gtgctccagc aagatagact ttgtgttatt ctatctttta ttctgctaag cccaaagatt
     4081 acatgttggt gttcaaagtg tagcaaaaaa tgatgtatat ttataaatct atttatacca
     4141 ctatatcata tgtatatata tttataacca cttaaattgt gagccaagcc atgtaaaaga
     4201 tctacttttt ctaagggcaa aaaaaaaaaa aaaaaaaaaa gaacactcct ttctgagact
     4261 ttgcttaata cttggtgacc tcacaatcac gtcggtatga ttgggcaccc ttgcctactg
     4321 taagagaccc taaaaccttg gtgcagtggt ggggaccaca aaacaaccag ggaggaagag
     4381 atacatcatt ttttagtatt aaggaccatc taagacagct ctattttttt tttgccactt
     4441 tatgattatg tggtcacacc caagtcacag aaataaaaaa ctgactttac cgctgcaatt
     4501 tttctgtttt cctccttact aaatactgat acattactcc aatctatttt ataattatat
     4561 ttgacatttt gttcacatca actaatgttc acctgtagaa gagaacaaat ttcgaataat
     4621 ccagggaaac ccaagagcct tactggtctt ctgtaacttc caagactgac agctttttat
     4681 gtatcagtgt ttgataaaca cagtccttaa ctgaaggtaa accaaagcat cacgttgaca
     4741 ttagaccaaa tacttttgat tcccaactac tcgtttgttc tttttctcct tttgtgcttt
     4801 cccatagtga gaatttttat aaagacttct tgcttctctc accatccatc cttctctttt
     4861 ctgcctctta catgtgaatg ttgagcccac aatcaacagt ggttttattt tttcctctac
     4921 tcaaagttaa aactgaccaa agttactggc tttttacttt gctagaacaa caaactatct
     4981 tatgtttaca tactggttta caatgttatt tatgtgcaaa ttgtcaaaat gtaaattaaa
     5041 tataaatgtt catgctttac caaaa
//
