LOCUS       XM_006715550            4936 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PR/SET domain 1 (PRDM1), transcript variant
            X2, mRNA.
ACCESSION   XM_006715550
VERSION     XM_006715550.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006715550.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..4936
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /note="PR/SET domain 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 11 ESTs, 139 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 25 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
     CDS             94..2484
                     /gene="PRDM1"
                     /gene_synonym="BLIMP-1; BLIMP1; PRDI-BF1"
                     /codon_start=1
                     /product="PR domain zinc finger protein 1 isoform X2"
                     /protein_id="XP_006715613.1"
                     /db_xref="GeneID:639"
                     /db_xref="HGNC:HGNC:9346"
                     /db_xref="MIM:603423"
                     /translation="MTPGILGHWTVCPEHFSAMRGKARDCSEAAPKCNSSTVRFQGLA
                     EGTKGTMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSVQAEASLPRNLL
                     FKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSRGELHH
                     FIDGFNEEKSNWMRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDF
                     AERLHYPYPGELTMMNLTQTQSSLKQPSTEKNELCPKNVPKREYSVKEILKLDSNPSK
                     GKDLYRSNISPLTSEKDLDDFRRRGSPEMPFYPRVVYPIRAPLPEDFLKASLAYGIER
                     PTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLN
                     ASYGTEGLGSYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINN
                     FGLFPRLCPVYSNLLGGGSLPHPMLNPTSLPSSLPSDGARRLLQPEHPREVLVPAPHS
                     AFSFTGAAASMKDKACSPTSGSPTAGTAATAEHVVQPKATSAAMAAPSSDEAMNLIKN
                     KRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVCHKRFSSTSNLKTHLRLH
                     SGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCSQCHKNYIHLCSLKVHLKGNCA
                     AAPAPGLPLEDLTRINEEIEKFDISDNADRLEDVEDDISVISVVEKEILAVVRKEKEE
                     TGLKVSLQRNMGNGLLSSGCSLYESSDLPLMKLPPSNPLPLVPVKVKQETVEPMDP"
ORIGIN      
        1 attcagaggc agacagagct ccttcctctt cctctccttg tttgtgacac ttttctgagg
       61 cagcttttcc acagtgccga gggtctggcg gccatgaccc caggcattct gggacactgg
      121 actgtgtgcc cagaacattt ttctgccatg agaggtaaag ccagggattg ttcagaggct
      181 gcccccaagt gtaactccag cactgtgagg tttcagggat tggcagaggg gaccaagggg
      241 accatgaaaa tggacatgga ggatgcggat atgactctgt ggacagaggc tgagtttgaa
      301 gagaagtgta catacattgt gaacgaccac ccctgggatt ctggtgctga tggcggtact
      361 tcggttcagg cggaggcatc cttaccaagg aatctgcttt tcaagtatgc caccaacagt
      421 gaagaggtta ttggagtgat gagtaaagaa tacataccaa agggcacacg ttttggaccc
      481 ctaataggtg aaatctacac caatgacaca gttcctaaga acgccaacag gaaatatttt
      541 tggaggatct attccagagg ggagcttcac cacttcattg acggctttaa tgaagagaaa
      601 agcaactgga tgcgctatgt gaatccagca cactctcccc gggagcaaaa cctggctgcg
      661 tgtcagaacg ggatgaacat ctacttctac accattaagc ccatccctgc caaccaggaa
      721 cttcttgtgt ggtattgtcg ggactttgca gaaaggcttc actaccctta tcccggagag
      781 ctgacaatga tgaatctcac acaaacacag agcagtctaa agcaaccgag cactgagaaa
      841 aatgaactct gcccaaagaa tgtcccaaag agagagtaca gcgtgaaaga aatcctaaaa
      901 ttggactcca acccctccaa aggaaaggac ctctaccgtt ctaacatttc acccctcaca
      961 tcagaaaagg acctcgatga ctttagaaga cgtgggagcc ccgaaatgcc cttctaccct
     1021 cgggtcgttt accccatccg ggcccctctg ccagaagact ttttgaaagc ttccctggcc
     1081 tacgggatcg agagacccac gtacatcact cgctccccca ttccatcctc caccactcca
     1141 agcccctctg caagaagcag ccccgaccaa agcctcaaga gctccagccc tcacagcagc
     1201 cctgggaata cggtgtcccc tgtgggcccc ggctctcaag agcaccggga ctcctacgct
     1261 tacttgaacg cgtcctacgg cacggaaggt ttgggctcct accctggcta cgcacccctg
     1321 ccccacctcc cgccagcttt catcccctcg tacaacgctc actaccccaa gttcctcttg
     1381 cccccctacg gcatgaattg taatggcctg agcgctgtga gcagcatgaa tggcatcaac
     1441 aactttggcc tcttcccgag gctgtgccct gtctacagca atctcctcgg tgggggcagc
     1501 ctgccccacc ccatgctcaa ccccacttct ctcccgagct cgctgccctc agatggagcc
     1561 cggaggttgc tccagccgga gcatcccagg gaggtgcttg tcccggcgcc ccacagtgcc
     1621 ttctccttta ccggggccgc cgccagcatg aaggacaagg cctgtagccc cacaagcggg
     1681 tctcccacgg cgggaacagc cgccacggca gaacatgtgg tgcagcccaa agctacctca
     1741 gcagcgatgg cagcccccag cagcgacgaa gccatgaatc tcattaaaaa caaaagaaac
     1801 atgaccggct acaagaccct tccctacccg ctgaagaagc agaacggcaa gatcaagtac
     1861 gaatgcaacg tttgcgccaa gactttcggc cagctctcca atctgaaggt ctgccacaag
     1921 agatttagca gcaccagcaa tctcaagacc cacctgcgac tccattctgg agagaaacca
     1981 taccaatgca aggtgtgccc tgccaagttc acccagtttg tgcacctgaa actgcacaag
     2041 cgtctgcaca cccgggagcg gccccacaag tgctcccagt gccacaagaa ctacatccat
     2101 ctctgtagcc tcaaggttca cctgaaaggg aactgcgctg cggccccggc gcctgggctg
     2161 cccttggaag atctgacccg aatcaatgaa gaaatcgaga agtttgacat cagtgacaat
     2221 gctgaccggc tcgaggacgt ggaggatgac atcagtgtga tctctgtagt ggagaaggaa
     2281 attctggccg tggtcagaaa agagaaagaa gaaactggcc tgaaagtgtc tttgcaaaga
     2341 aacatgggga atggactcct ctcctcaggg tgcagccttt atgagtcatc agatctaccc
     2401 ctcatgaagt tgcctcccag caacccacta cctctggtac ctgtaaaggt caaacaagaa
     2461 acagttgaac caatggatcc ttaagatttt cagaaaacac ttattttgtt tcttaagtta
     2521 tgacttggtg agtcagggtg cctgtaggaa gtggcttgta cataatccca gctctgcaaa
     2581 gctctctcga cagcaaatgg tttcccctca cctctggaat taaagaagga actccaaagt
     2641 tactgaaatc tcagggcatg aacaaggcaa aggccatata tatatatata tatatatctg
     2701 tatacatatt atatatactt atttacacct gtgtctatat atttgcccct gtgtattttg
     2761 aatatttgtg tggacatgtt tgcatagcct tcccattact aagactatta cctagtcata
     2821 attatttttt caatgataat ccttcataat ttattataca atttatcatt cagaaagcaa
     2881 taattaaaaa agtttacaat gactggaaag attccttgta atttgagtat aaatgtattt
     2941 ttgtcttgtg gccattcttt gtagataatt tctgcacatc tgtataagta cctaagattt
     3001 agttaaacaa atatatgact tcagtcaacc tctctctcta ataatggttt gaaaatgagg
     3061 tttgggtaat tgccaatgtt ggacagttga tgtgttcatt cctgggatcc tatcatttga
     3121 acagcattgt acataacttg ggggtatgtg tgcaggatta cccaagaata acttaagtag
     3181 aagaaacaag aaagggaatc ttgtatattt ttgttgatag ttcatgtttt tcccccagcc
     3241 acaattttac cggaagggtg acaggaaggc tttaccaacc tgtctctccc tccaaaagag
     3301 cagaatcctc ccaccgccct gccctcccca ccgagtcctg tggccattca gagcggccac
     3361 atgacttttg catccattgt attatcagaa aatgtgaaga agaaaaaaat gccatgtttt
     3421 aaaaccactg cgaaaatttc cccaaagcat aggtggcttt gtgtgtgtgc gatttggggg
     3481 cttgagtctg ggtggtgttt tgttgttggt ttttgttgct tttttttttt tttttttttt
     3541 aatgtcaaaa ttgcacaaac atggtgctct accaggaagg attcgaggta gataggctca
     3601 ggccacactt taaaaacaaa cacacaaaca acaaaaaacg ggtattctag tcatcttggg
     3661 gtaaaagcgg gtaatgaaca ttcctatccc caacacatca attgtatttt ttctgtaaaa
     3721 ctcagatttt cctcagtatt tgtgttttta cattttatgg ttaatttaat ggaagatgaa
     3781 agggcattgc aaagttgttc aacaacagtt acctcattga gtgtgtccag tagtgcagga
     3841 aatgatgtct tatctaatga tttgcttctc tagaggagaa accgagtaaa tgtgctccag
     3901 caagatagac tttgtgttat tctatctttt attctgctaa gcccaaagat tacatgttgg
     3961 tgttcaaagt gtagcaaaaa atgatgtata tttataaatc tatttatacc actatatcat
     4021 atgtatatat atttataacc acttaaattg tgagccaagc catgtaaaag atctactttt
     4081 tctaagggca aaaaaaaaaa aaaaaaaaaa agaacactcc tttctgagac tttgcttaat
     4141 acttggtgac ctcacaatca cgtcggtatg attgggcacc cttgcctact gtaagagacc
     4201 ctaaaacctt ggtgcagtgg tggggaccac aaaacaacca gggaggaaga gatacatcat
     4261 tttttagtat taaggaccat ctaagacagc tctatttttt ttttgccact ttatgattat
     4321 gtggtcacac ccaagtcaca gaaataaaaa actgacttta ccgctgcaat ttttctgttt
     4381 tcctccttac taaatactga tacattactc caatctattt tataattata tttgacattt
     4441 tgttcacatc aactaatgtt cacctgtaga agagaacaaa tttcgaataa tccagggaaa
     4501 cccaagagcc ttactggtct tctgtaactt ccaagactga cagcttttta tgtatcagtg
     4561 tttgataaac acagtcctta actgaaggta aaccaaagca tcacgttgac attagaccaa
     4621 atacttttga ttcccaacta ctcgtttgtt ctttttctcc ttttgtgctt tcccatagtg
     4681 agaattttta taaagacttc ttgcttctct caccatccat ccttctcttt tctgcctctt
     4741 acatgtgaat gttgagccca caatcaacag tggttttatt ttttcctcta ctcaaagtta
     4801 aaactgacca aagttactgg ctttttactt tgctagaaca acaaactatc ttatgtttac
     4861 atactggttt acaatgttat ttatgtgcaa attgtcaaaa tgtaaattaa atataaatgt
     4921 tcatgcttta ccaaaa
//
