LOCUS       NM_001310134            1919 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens PRAME family member 25 (PRAMEF25), mRNA.
ACCESSION   NM_001310134 XM_005276123 XM_006711082
VERSION     NM_001310134.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Gregory,S.G., Barlow,K.F., McLay,K.E., Kaul,R., Swarbreck,D.,
            Dunham,A., Scott,C.E., Howe,K.L., Woodfine,K., Spencer,C.C.,
            Jones,M.C., Gillson,C., Searle,S., Zhou,Y., Kokocinski,F.,
            McDonald,L., Evans,R., Phillips,K., Atkinson,A., Cooper,R.,
            Jones,C., Hall,R.E., Andrews,T.D., Lloyd,C., Ainscough,R.,
            Almeida,J.P., Ambrose,K.D., Anderson,F., Andrew,R.W., Ashwell,R.I.,
            Aubin,K., Babbage,A.K., Bagguley,C.L., Bailey,J., Beasley,H.,
            Bethel,G., Bird,C.P., Bray-Allen,S., Brown,J.Y., Brown,A.J.,
            Buckley,D., Burton,J., Bye,J., Carder,C., Chapman,J.C., Clark,S.Y.,
            Clarke,G., Clee,C., Cobley,V., Collier,R.E., Corby,N.,
            Coville,G.J., Davies,J., Deadman,R., Dunn,M., Earthrowl,M.,
            Ellington,A.G., Errington,H., Frankish,A., Frankland,J., French,L.,
            Garner,P., Garnett,J., Gay,L., Ghori,M.R., Gibson,R., Gilby,L.M.,
            Gillett,W., Glithero,R.J., Grafham,D.V., Griffiths,C.,
            Griffiths-Jones,S., Grocock,R., Hammond,S., Harrison,E.S., Hart,E.,
            Haugen,E., Heath,P.D., Holmes,S., Holt,K., Howden,P.J., Hunt,A.R.,
            Hunt,S.E., Hunter,G., Isherwood,J., James,R., Johnson,C.,
            Johnson,D., Joy,A., Kay,M., Kershaw,J.K., Kibukawa,M.,
            Kimberley,A.M., King,A., Knights,A.J., Lad,H., Laird,G., Lawlor,S.,
            Leongamornlert,D.A., Lloyd,D.M., Loveland,J., Lovell,J., Lush,M.J.,
            Lyne,R., Martin,S., Mashreghi-Mohammadi,M., Matthews,L.,
            Matthews,N.S., McLaren,S., Milne,S., Mistry,S., Moore,M.J.,
            Nickerson,T., O'Dell,C.N., Oliver,K., Palmeiri,A., Palmer,S.A.,
            Parker,A., Patel,D., Pearce,A.V., Peck,A.I., Pelan,S., Phelps,K.,
            Phillimore,B.J., Plumb,R., Rajan,J., Raymond,C., Rouse,G.,
            Saenphimmachak,C., Sehra,H.K., Sheridan,E., Shownkeen,R., Sims,S.,
            Skuce,C.D., Smith,M., Steward,C., Subramanian,S., Sycamore,N.,
            Tracey,A., Tromans,A., Van Helmond,Z., Wall,M., Wallis,J.M.,
            White,S., Whitehead,S.L., Wilkinson,J.E., Willey,D.L., Williams,H.,
            Wilming,L., Wray,P.W., Wu,Z., Coulson,A., Vaudin,M., Sulston,J.E.,
            Durbin,R., Hubbard,T., Wooster,R., Dunham,I., Carter,N.P.,
            McVean,G., Ross,M.T., Harrow,J., Olson,M.V., Beck,S., Rogers,J.,
            Bentley,D.R., Banerjee,R., Bryant,S.P., Burford,D.C., Burrill,W.D.,
            Clegg,S.M., Dhami,P., Dovey,O., Faulkner,L.M., Gribble,S.M.,
            Langford,C.F., Pandian,R.D., Porter,K.M. and Prigmore,E.
  TITLE     The DNA sequence and biological annotation of human chromosome 1
  JOURNAL   Nature 441 (7091), 315-321 (2006)
   PUBMED   16710414
  REMARK    Erratum:[Nature. 2006 Oct 26;443(7114):1013. Banerjee, R [added];
            Bryant, SP [added]; Burford, DC [added]; Burrill, WDH [added];
            Clegg, SM [added]; Dhami, P [added]; Dovey, O [added]; Faulkner, LM
            [added]; Gribble, SM [added]; Langford, CF [added]; Pandian, RD
            [added]; Porter, KM [added]; Prigmore, E]
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from AC245056.3.
            
            On Oct 27, 2021 this sequence version replaced NM_001310134.2.
            
            CCDS Note: This CCDS representation lacks full-length human
            transcript support. Its exon combination is therefore inferred, but
            it is supported by paralogous transcripts.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA2158188 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000619661.3/ ENSP00000478309.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-134               AC245056.3         126085-126218       c
            135-443             AC245056.3         123006-123314       c
            444-1025            AC245056.3         121752-122333       c
            1026-1919           AC245056.3         119108-120001       c
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1p36.21"
     gene            1..1919
                     /gene="PRAMEF25"
                     /note="PRAME family member 25"
                     /db_xref="GeneID:441873"
                     /db_xref="HGNC:HGNC:49179"
     exon            1..134
                     /gene="PRAMEF25"
                     /inference="alignment:Splign:2.1.0"
     exon            135..443
                     /gene="PRAMEF25"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..1587
                     /gene="PRAMEF25"
                     /note="putative PRAME family member 25"
                     /codon_start=1
                     /product="PRAME family member 25"
                     /protein_id="NP_001297063.1"
                     /db_xref="CCDS:CCDS81265.1"
                     /db_xref="GeneID:441873"
                     /db_xref="HGNC:HGNC:49179"
                     /translation="MKMSIRTPPRLLELAGRSVLRDQALAMSTLEELPTELFPPLFME
                     AFSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLETFQAVLNGLDALLTHGVRPRRWKL
                     QVLDLQDVCENFWMVWSEAMARGCFLNAKRNKKPVQDCPRMRGRQPLTVFVELWLKNR
                     TLDEHLTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKW
                     VLPILTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLHCLQKLY
                     MNSVSFLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIR
                     LTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPI
                     SMATLENLLSHTIILKNLCLELYPAPRESYGADGTLCWSRFTQIRAELMKRVRDLRHP
                     KRILFGTDYCPDCGNRSFYDLEADQYCC"
     exon            444..1025
                     /gene="PRAMEF25"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1919
                     /gene="PRAMEF25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtgggagt tgtgactaga aacgtcaata aaagcttcta aagacccaca ggagagaccc
       61 aaagtcttca agcctggagt tcctgcctgg ttcttcctga ggtctgagca ccttctaaac
      121 tacatccaga tctgttttcc ctgcagattc atgaagatga gcatccggac tccacccaga
      181 ctcctggagc tggcggggcg gagcgtgctg agggaccaag ccttggccat gtccaccctg
      241 gaggagctgc ccacagaact tttcccccca ctgttcatgg aggccttcag caggagacgc
      301 tgtgaggccc tgaagctgat ggtacaggcc tggcccttcc gccgcctccc tctgaggcct
      361 ctgataaaga tgccttgtct ggagaccttc caagctgtgc tcaatgggct tgatgcactg
      421 cttacccacg gggttcgtcc caggaggtgg aaacttcaag tgctggattt acaggatgtc
      481 tgtgagaact tctggatggt ttggtctgaa gctatggccc gtgggtgctt cctcaatgcc
      541 aagaggaaca aaaaaccagt gcaggactgt ccaaggatga gaggacggca gcccttgact
      601 gtgttcgtag aactttggct caagaacagg actctggatg aacacctcac ctgcctcctt
      661 ctatgggtca agcagaggaa agatttacta cacctgtgct gtaagaagct gaaaattttg
      721 ggaatgccct tccgcaatat cagaagcatc ctgaaaatgg tgaacctaga ctgtatccag
      781 gaggtggaag tgaattgcaa gtgggtactg cccatcctga cacagtttac cccatacctg
      841 ggccacatga ggaatcttca gaagctcgtt ctctcccaca tggatgtctc tcgctacgtt
      901 tccccagagc agaagaagga gattgttacc cagttcacca ctcagttcct caagctgcac
      961 tgcctccaaa agctttatat gaactctgtt tctttcctcg aaggccacct ggaccagctg
     1021 ctcagctgtc tgaagacctc gttaaaggtc ctcacaataa ctaactgtgt gcttttggaa
     1081 tcagacttga agcatctatc ccagtgcccg agtatcagtc aactaaagac cctggacctg
     1141 agtggcatca gactgaccaa ttacagtctt gtgcctctcc aaattctcct agaaaaagtt
     1201 gcagccaccc ttgagtacct ggatttagat gactgtggca tcatagactc ccaagtcaac
     1261 gccatcctgc ctgccctgag ccgctgcttt gagctcaaca ccttcagctt ctgtggaaat
     1321 cccatctcca tggccaccct ggagaacctg ctgagccaca caatcatact caaaaactta
     1381 tgcctggagc tgtatcctgc cccacgggag agttatggtg ctgatggtac tctctgctgg
     1441 agcagattta ctcagattag ggctgagctg atgaagagag ttagggactt aaggcacccc
     1501 aagaggatct tgttcggtac tgactactgc cctgactgtg gcaacaggtc attttatgac
     1561 ctggaggcag atcaatactg ctgttgaatg cctgcctatt tggatgggta tgtcaaacgc
     1621 tttcttctgg acacttggaa actaaaacct aggtcttagg tacatcctaa agggagcaca
     1681 gaacccatcg tttcacacat gggctctgaa agtgggaaag gaatgctgat caagcagggg
     1741 caggacttgg gggaaatgtt gccatggatt cgatgggact ttgggaacgt gtatcctgta
     1801 gagtcgaaaa tgggaatctg aatgtctaga gtggaattca ggcttgagaa tacatgaggg
     1861 agttactctt gcatggatgg ttgtaaagaa acaatcagaa ataaaggaaa actgagcag
//
