LOCUS       XM_047429788            3892 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PTPRF interacting protein alpha 2 (PPFIA2),
            transcript variant X25, mRNA.
ACCESSION   XM_047429788
VERSION     XM_047429788.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..3892
                     /gene="PPFIA2"
                     /note="PTPRF interacting protein alpha 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 20 ESTs, 40 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:8499"
                     /db_xref="HGNC:HGNC:9246"
                     /db_xref="MIM:603143"
     CDS             182..3862
                     /gene="PPFIA2"
                     /codon_start=1
                     /product="liprin-alpha-2 isoform X23"
                     /protein_id="XP_047285744.1"
                     /db_xref="GeneID:8499"
                     /db_xref="HGNC:HGNC:9246"
                     /db_xref="MIM:603143"
                     /translation="MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDR
                     LLDTLRETQESLSLAQQRLQDVIYDRDSLQRQLNSALPQDIESLTGGLAGSKGADPPE
                     FAALTKELNACREQLLEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQ
                     AQSPSGVSSEVEVLKALKSLFEHHKALDEKIVALREQNVHIQRKMASSEGSTESEHLE
                     GMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSRVGEV
                     EQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHD
                     MNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRI
                     AALTKAEERHGNIEERMRHLEGQLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTE
                     SNERLQLHLKERMAALEEKNVLIQESETFRKNLEESLHDKERLAEEIEKLRSELDQLK
                     MRTGSLIEPTIPRTHLDTSAELRYSVGSLVDSQSDYRTTKVIRRPRRGRMGVRRDEPK
                     VKSLGDHEWNRTQQIGVLSSHPFESDTEMSDIDDDDRETIFSSMDLLSPSGHSDAQTL
                     AMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVASVSLEGLNLARVHPGTSITAS
                     VTASSLASSSPPSGHSTPKLTPRSPAREMDRMGVMTLPSDLRKHRRKIAVVEEDGRED
                     KATIKCETSPPPTPRALRMTHTLPSSYHNDARSSLSVSLEPESLGLGSANSSQDSLHK
                     APKKKGIKSSIGRLFGKKEKARLGQLRGFMETEAAAQESLGLGKLGTQAEKDRRLKKK
                     HELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEI
                     QREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMENLAAPAKTK
                     ESEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRV
                     HLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREASQHEIKDVLVWSNDRVIRWIQA
                     IGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQARQILEREYNNLLAL
                     GTERRLDESDDKNFRRGSTWRRQFPPREVHGISMMPGSSETLPAGFRLTTTSGQSRKM
                     TTDVASSRLQRLDNSTVRTYSC"
ORIGIN      
        1 aggagtagca gccaccgcac gaggcaagtg aggagagaag atgctgtagc gtcctcaccg
       61 gctgccagca gggaaatggt ccaggagtgc tgggtgtgag cctcccttct cctcaagccg
      121 gagactgcgg ttgtcattga tcaattgaag aagcaaggac ccgaaatcac agacattagc
      181 aatgatgtgt gaagtgatgc ccacgattaa tgaggacacc ccaatgagcc aaagggggtc
      241 ccaaagcagt ggctcggact cagactccca ttttgagcag ctgatggtga atatgctaga
      301 tgaaagggat cgtcttctag acacccttcg ggagacccag gaaagcctct cacttgccca
      361 gcaaagactt caggatgtca tctatgaccg agactcactc cagagacagc tcaattcagc
      421 cctgccacag gatatcgaat ccctaacagg agggctggct ggttctaagg gggctgatcc
      481 accggaattt gctgcactga caaaagaatt aaatgcctgc agggaacaac ttctagaaaa
      541 ggaagaagaa atctctgaac ttaaagctga aagaaacaac acaagactat tactggagca
      601 tttggagtgc cttgtgtcac gacatgaaag atcactaaga atgacggtgg taaaacggca
      661 agcccagtct ccctcaggag tatccagtga agttgaagtt ctcaaggcac tgaaatcttt
      721 gtttgagcac cacaaggcct tggatgaaaa gattgttgcc ttgcgtgaac aaaatgttca
      781 tatacaaaga aaaatggcat caagcgaggg atccacagag tcagaacatc ttgaagggat
      841 ggaacctgga cagaaagtcc atgagaagcg tttgtccaat ggttctatag actcaaccga
      901 tgaaactagt caaatagttg aactacaaga attgcttgaa aagcaaaact atgaaatggc
      961 ccagatgaaa gaacgtttag cagccctttc ttcccgagtg ggagaggtgg aacaggaagc
     1021 agagacagca agaaaggatc tcattaaaac agaagaaatg aacaccaagt atcaaaggga
     1081 cattagggag gccatggcac aaaaggaaga tatggaagaa agaattacaa cccttgaaaa
     1141 gcgttacctc agtgctcaga gagaatctac ctccatacat gacatgaatg ataaactaga
     1201 aaatgagtta gcaaataaag aagctatcct gcggcagatg gaagagaaaa acagacagtt
     1261 acaagaacgt cttgagctag ctgaacaaaa gttgcagcag accatgagaa aggctgaaac
     1321 cttgcctgaa gtagaggctg aactggctca gagaattgca gccctaacca aggctgaaga
     1381 gagacatgga aatattgaag aacgtatgag acatttagag ggtcaacttg aagagaagaa
     1441 tcaagaactt caaagagcta ggcaaagaga gaaaatgaat gaggagcata acaagagatt
     1501 atcggatacg gttgatagac ttctgactga atccaatgaa cgcctacaac tacacttaaa
     1561 ggaaagaatg gctgctctag aagaaaagaa tgttttaatt caagaatcag aaactttcag
     1621 aaagaatctt gaagaatctt tacatgataa ggaaagatta gcagaagaaa ttgaaaagct
     1681 gagatctgaa cttgaccaat tgaaaatgag aactggctct ttaattgaac ccacaatacc
     1741 aagaactcat ctagacacct cagctgagtt gcggtactca gtgggatccc tagtggacag
     1801 ccagtctgat tacagaacaa ctaaagtaat aagaagacca aggagaggcc gcatgggtgt
     1861 gcgaagagat gagccaaagg tgaaatctct tggggatcac gagtggaata gaactcaaca
     1921 gattggagta ctaagcagcc acccttttga aagtgacact gaaatgtctg atattgatga
     1981 tgatgacaga gaaacaattt ttagctcaat ggatcttctc tctccaagtg gtcattccga
     2041 tgcccagacg ctagccatga tgcttcagga acaattggat gccatcaaca aagaaatcag
     2101 gctaattcag gaagaaaaag aatctacaga gttgcgtgct gaagaaattg aaaatagagt
     2161 ggctagtgtg agcctcgaag gcctgaattt ggcaagggtc cacccaggta cctccattac
     2221 tgcctctgtt acagcttcat cgctggccag ttcatctccc cccagtggac actcaactcc
     2281 aaagctcacc cctcgaagcc ctgccaggga aatggatcgg atgggagtca tgacactgcc
     2341 aagtgatctg aggaaacatc ggagaaagat tgcagttgtg gaagaagatg gtcgagagga
     2401 caaagcaaca attaaatgtg aaacttctcc tcctcctacc cctagagccc tcagaatgac
     2461 tcacactctc ccttcttcct accacaatga tgctcgaagt agtttatctg tctctcttga
     2521 gccagaaagc ctcgggcttg gtagtgccaa cagcagccaa gactctcttc acaaagcccc
     2581 caagaagaaa ggaatcaagt cttcaatagg acgtttgttt ggtaaaaaag aaaaagctcg
     2641 acttgggcag ctccgaggct ttatggagac tgaagctgca gctcaggagt ccctggggtt
     2701 aggcaaactc ggaactcaag ctgagaagga tcgaagacta aagaaaaagc atgaacttct
     2761 tgaagaagct cggagaaagg gattaccttt tgcccagtgg gatgggccaa ctgtggtcgc
     2821 atggctagag ctttggttgg gaatgcctgc gtggtacgtg gcagcctgcc gagccaacgt
     2881 gaagagtggt gccatcatgt ctgctttatc tgacactgag atccagagag aaattggaat
     2941 cagcaatcca ctgcatcgct taaaacttcg attagcaatc caggagatgg tttccctaac
     3001 aagtccttca gctcctccaa catctcgaac tccttcaggc aacgtttggg tgactcatga
     3061 agaaatggaa aatcttgcag ctccagcaaa aacgaaagaa tctgaggaag gaagctgggc
     3121 ccagaccctg gcttatggag atatgaatca tgagtggatt ggaaatgaat ggcttcccag
     3181 cttggggtta cctcagtaca gaagttactt tatggaatgc ttggtagatg caagaatgtt
     3241 agatcaccta acaaaaaaag atctccgtgt ccatttaaaa atggtggata gtttccatcg
     3301 aacaagttta caatatggaa ttatgtgctt aaagaggttg aattatgaca gaaaagaact
     3361 agaaagaaga cgggaagcaa gccaacatga aataaaagac gtgttggtgt ggagcaatga
     3421 ccgagttatt cgctggatac aagcaattgg acttcgagaa tatgcaaata atatacttga
     3481 gagcggtgtg catggctcac ttatagccct ggatgaaaac tttgactaca gcagcttagc
     3541 tttattatta cagattccaa cacagaacac ccaggcaagg cagattcttg aaagagaata
     3601 caataacctc ttggccctgg gaactgaaag gcgactggat gaaagtgatg acaagaactt
     3661 cagacgtgga tcaacctgga gaaggcagtt tcctcctcgt gaagtacatg gaatcagcat
     3721 gatgcctggg tcctcagaaa cattaccagc tggatttagg ttaaccacaa cctctgggca
     3781 gtcaagaaaa atgacaacag atgttgcttc atcaagactg cagaggttag acaactccac
     3841 tgttcgcaca tactcatgtt gaccagccac tcaaaggagg cagcactgac ct
//
