LOCUS       XM_047422642            1908 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein O-mannosyltransferase 1 (POMT1),
            transcript variant X14, mRNA.
ACCESSION   XM_047422642
VERSION     XM_047422642.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..1908
                     /gene="POMT1"
                     /gene_synonym="LGMD2K; LGMDR11; MDDGA1; MDDGB1; MDDGC1;
                     RT"
                     /note="protein O-mannosyltransferase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 90 ESTs, 413 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:10585"
                     /db_xref="HGNC:HGNC:9202"
                     /db_xref="MIM:607423"
     CDS             100..1215
                     /gene="POMT1"
                     /gene_synonym="LGMD2K; LGMDR11; MDDGA1; MDDGB1; MDDGC1;
                     RT"
                     /codon_start=1
                     /product="protein O-mannosyl-transferase 1 isoform X8"
                     /protein_id="XP_047278598.1"
                     /db_xref="GeneID:10585"
                     /db_xref="HGNC:HGNC:9202"
                     /db_xref="MIM:607423"
                     /translation="MNRLCREARRTSGFVFSVRRPLVRPWRGGGCTSPATLGAARGAV
                     GIGKEGQYQPLIASLTWGLVPLSQAQEIVNRGSDTDVWKTILSEVRFVHVNTSAVLKL
                     SGAHLPDWGYRQLEIVGEKLSRGYHGSTVWNVEEHRYGASQEQRERERELHSPAQVDV
                     SRNLSFMARFSELQWRMLALRSDDSEHKYSSSPLEWVTLDTNIAYWLHPRTSAQIHLL
                     GNIVIWVSGSLALAIYALLSLWYLLRRRRNVHDLPQDAWLRWVLAGALCAGGWAVNYL
                     PFFLMEKTLFLYHYLPALTFQILLLPVVLQHISDHLCRSQLQRSIFSALVVAWYSSAC
                     HVSNTLRPLTYGDKSLSPHELKALRWKDSWDILIRKH"
ORIGIN      
        1 tctggcaggg acagtgtctg gccttcatct gagctgtctg cgagtcctgc cagataggga
       61 ctgagacttg ctcacttttt ggccagggct ctgagcccta tgaataggct ttgcagagag
      121 gcacgaagaa catcaggctt tgtattttct gtgaggaggc ctcttgtacg gccttggcga
      181 ggaggagggt gcacttcccc agcgaccctc ggagcagccc ggggtgctgt gggcattggg
      241 aaggaaggcc agtaccagcc ccttatagct tccctcactt ggggacttgt ccctttgtct
      301 caggctcaag aaattgtgaa cagaggatct gacacagacg tctggaagac catcctctca
      361 gaggtccgct ttgtgcacgt gaacacttcc gctgtcttaa agctgagcgg ggctcacctc
      421 cctgactggg ggtatcggca actggagatc gtcggggaga agctgtcccg gggctaccac
      481 gggagcacgg tgtggaacgt ggaggagcac cgatacggcg cgagccagga gcagagggag
      541 cgggaacggg agctgcactc acctgcgcag gtggacgtca gcaggaacct cagcttcatg
      601 gcgagattct cggagctgca gtggaggatg ctggcgctga gaagtgatga ctcggaacac
      661 aagtacagct ccagcccact ggagtgggtc accctggaca ccaatattgc ctactggctg
      721 caccccagga ccagcgctca gatccaccta cttggaaaca tagtgatctg ggtttcgggc
      781 agcctcgctc tggccatcta cgccctgctg tccttgtggt acctgctccg acggcgaaga
      841 aatgtccatg acctccctca ggatgcctgg ctgcgctggg tgctggctgg ggcgctgtgt
      901 gccggtggct gggcagtgaa ctacctcccg ttcttcctga tggagaagac actcttcctc
      961 taccactacc tgcccgcact caccttccaa atccttctgc tccctgtggt cctgcagcac
     1021 atcagcgacc acctgtgcag gtcccagctc cagaggagca tcttcagcgc cctggtggtg
     1081 gcctggtact cctccgcgtg ccacgtgtcc aacacgctgc gcccactcac ctacggggac
     1141 aagtcactct cgccacatga actcaaggcc cttcgctgga aagacagctg ggacatcttg
     1201 atccgaaaac actagaacaa gagtgtggca aagaacaccc gtgctggggt cgggatgagg
     1261 ttgaagggtc ttggtcaatg tacgtaatga gcagggtggg ccccacgctg ggaggacacg
     1321 ggctgggctg agcagggcct ctagtggaac acatgggggt ctcattgaaa agctctctga
     1381 tgagcacctc cttttgtgca aagttaattt tttctcgaca ataaagatat tccgtgtctt
     1441 tacccctgaa ctaagacaca gggagtattt cagaggccag cgtaggagtc attgacaaca
     1501 aaaagccgag aacccagggc cagcagtgga gcctcagcag accagggcct ggtccttgct
     1561 aactgctgca gggtggagtt tgatctggca gacccgatcc tccttcatga acacccagca
     1621 acctgagcaa gtcccggccc tgccctcagc gagcccggca ggcgtcctgg gacagctcag
     1681 tgttggaggg ccacctgaac cacgagccag ggctggggct tgcatgtcat tgtctatgac
     1741 agcgtcaaga ctggcccttg gcaccgtgct gtgtggaaac cctcccctct gagactccac
     1801 tgagacgtgg ctgagtgaaa tcttcctcgt cagtggtcaa ggtgtgtcat ccatacagct
     1861 ccatgccttt gtctttttta aatgtaatta aaaaaggaac caactggc
//
