LOCUS       XM_017001690            2768 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein O-linked mannose
            N-acetylglucosaminyltransferase 1 (beta 1,2-) (POMGNT1), transcript
            variant X3, mRNA.
ACCESSION   XM_017001690
VERSION     XM_017001690.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017001690.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..2768
                     /gene="POMGNT1"
                     /gene_synonym="GnT I.2; gnT-I.2; GNTI.2; LGMD2O; LGMDR15;
                     MEB; MGAT1.2; RP76"
                     /note="protein O-linked mannose
                     N-acetylglucosaminyltransferase 1 (beta 1,2-); Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 114 ESTs, 1415 long SRA reads, 12 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 36 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:55624"
                     /db_xref="HGNC:HGNC:19139"
                     /db_xref="MIM:606822"
     CDS             199..2181
                     /gene="POMGNT1"
                     /gene_synonym="GnT I.2; gnT-I.2; GNTI.2; LGMD2O; LGMDR15;
                     MEB; MGAT1.2; RP76"
                     /codon_start=1
                     /product="protein O-linked-mannose
                     beta-1,2-N-acetylglucosaminyltransferase 1 isoform X2"
                     /protein_id="XP_016857179.1"
                     /db_xref="GeneID:55624"
                     /db_xref="HGNC:HGNC:19139"
                     /db_xref="MIM:606822"
                     /translation="MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAV
                     LFLLVTVIVNIKLILDTRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVE
                     VYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAM
                     VLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGG
                     PVFGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYG
                     SVCSCKDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMIT
                     VFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASLTATFNLFPEAKFAVVL
                     EEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETMPGLG
                     WVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIVGLNM
                     NGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSF
                     LPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIWDLDVRGNHRGLWRLFRKKNHFLMV
                     GVPASPYSVKKPPSVTPIFLEPPPKEEGAPGAPEQT"
ORIGIN      
        1 ggggccgcaa gcggcatgga ggaggcggag gccgcggcga gccgggccga gcagtgaggg
       61 ccctagcggg gcccgagcgg ggcccggggc ccctaagccg tgagtgcctc cgcgtgggtg
      121 tccggaacgg gtagcgctgc cggtgcagat tcctgaagtc atgggctggc caggacattg
      181 gtgacccgcc aatccggtat ggacgactgg aagcccagcc ccctcatcaa gccctttggg
      241 gctcggaaga agcggagctg gtaccttacc tggaagtata aactgacaaa ccagcgggcc
      301 ctgcggagat tctgtcagac aggggccgtg cttttcctgc tggtgactgt cattgtcaat
      361 atcaagttga tcctggacac tcggcgagcc atcagtgaag ccaatgaaga cccagagcca
      421 gagcaagact atgatgaggc cctaggccgc ctggagcccc cacggcgcag aggcagtggt
      481 ccccggcggg tcctggacgt agaggtgtat tcaagtcgca gcaaagtata tgtggcagtg
      541 gatggcacca cggtgctgga ggatgaggcc cgggagcagg gccggggcat ccatgtcatt
      601 gtcctcaacc aggccacggg ccacgtgatg gcaaaacgtg tgtttgacac gtactcacct
      661 catgaggatg aggccatggt gctattcctc aacatggtag cgcccggccg agtgctcatc
      721 tgcactgtca aggatgaggg ctccttccac ctcaaggaca cagccaaggc tctgctgagg
      781 agcctgggca gccaggctgg ccctgccctg ggctggaggg acacatgggc cttcgtggga
      841 cgaaaaggag gtcctgtctt cggggagaaa cattctaaat cacctgccct ctcttcctgg
      901 ggggacccag tcctgctgaa gacagatgtg ccattgagct cagcagaaga ggcagagtgc
      961 cactgggcag acacagagct gaaccgtcgc cgccggcgct tctgcagcaa agttgagggc
     1021 tatggaagtg tatgcagctg caaggacccc acacccatcg agttcagccc tgacccactc
     1081 ccagacaaca aggtcctcaa tgtgcctgtg gctgtcattg cagggaaccg acccaattac
     1141 ctgtacagga tgctgcgctc tctgctttca gcccaggggg tgtctcctca gatgataaca
     1201 gttttcattg acggctacta tgaggaaccc atggatgtgg tggcactgtt tggtctgagg
     1261 ggcatccagc atactcccat cagcatcaag aatgcccgcg tgtctcagca ctacaaggcc
     1321 agcctcactg ccactttcaa cctgtttccg gaggccaagt ttgctgtggt tctggaagag
     1381 gacctggaca ttgctgtgga ttttttcagt ttcctgagcc aatccatcca cctactggag
     1441 gaggatgaca gcctgtactg catctctgcc tggaatgacc aggggtatga acacacggct
     1501 gaggacccag cactactgta ccgtgtggag accatgcctg ggctgggctg ggtgctcagg
     1561 aggtccttgt acaaggagga gcttgagccc aagtggccta caccggaaaa gctctgggat
     1621 tgggacatgt ggatgcggat gcctgaacaa cgccggggcc gagagtgcat catccctgac
     1681 gtttcccgat cctaccactt tggcatcgtc ggcctcaaca tgaatggcta ctttcacgag
     1741 gcctacttca agaagcacaa gttcaacacg gttccaggtg tccagctcag gaatgtggac
     1801 agtctgaaga aagaagctta tgaagtggaa gttcacaggc tgctcagtga ggctgaggtt
     1861 ctggaccaca gcaagaaccc ttgtgaagac tctttcctgc cagacacaga gggccacacc
     1921 tacgtggcct ttattcgaat ggagaaagat gatgacttca ccacctggac ccagcttgcc
     1981 aagtgcctcc atatctggga cctggatgtg cgtggcaacc atcggggcct gtggagattg
     2041 tttcggaaga agaaccactt cctgatggtg ggggtcccgg cttcccccta ctcagtgaag
     2101 aagccaccct cagtcacccc aattttcctg gagccacccc caaaggagga gggagcccca
     2161 ggagccccag aacagacatg agacctcctc caggaccctg cggggctggg tactgtgtac
     2221 ccccaggctg gctagccctt ccctccatcc tgtaggattt tgtagatgct ggtaggggct
     2281 ggggctacct tgtttttaac atgagactta attactaact ccaaggggag ggttcccctg
     2341 ctccaacacc ccgttcctga gttaaaagtc tatttattta cttccttgtt ggagaagggc
     2401 aggagagtac ctgggaatca ttacgatccc tagcagctca tcctgccctt tgaataccct
     2461 cactttccag gcctggctca gaatctaacc tatttattga ctgtcctgag ggccttgaaa
     2521 acaggccgaa cctggagggc ctggatttct ttttgggctg gaatgctgcc ctgagggtgg
     2581 ggctggctct tactcaggaa actgctgtgc ccaacccatg gacaggccca gctggggccc
     2641 acatgctgac acagactcac tcagagaccc ttagacactg gaccaggcct cctctcagcc
     2701 ttctctttgt ccagatttcc aaagctggat aagttggtca ttgattaaaa aaggagaagc
     2761 cctctggg
//
