LOCUS       XM_006710756            2432 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein O-linked mannose
            N-acetylglucosaminyltransferase 1 (beta 1,2-) (POMGNT1), transcript
            variant X5, mRNA.
ACCESSION   XM_006710756
VERSION     XM_006710756.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006710756.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..2432
                     /gene="POMGNT1"
                     /gene_synonym="GnT I.2; gnT-I.2; GNTI.2; LGMD2O; LGMDR15;
                     MEB; MGAT1.2; RP76"
                     /note="protein O-linked mannose
                     N-acetylglucosaminyltransferase 1 (beta 1,2-); Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 141 ESTs, 181 long SRA reads, 1 Protein, and 92%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:55624"
                     /db_xref="HGNC:HGNC:19139"
                     /db_xref="MIM:606822"
     CDS             150..2396
                     /gene="POMGNT1"
                     /gene_synonym="GnT I.2; gnT-I.2; GNTI.2; LGMD2O; LGMDR15;
                     MEB; MGAT1.2; RP76"
                     /codon_start=1
                     /product="protein O-linked-mannose
                     beta-1,2-N-acetylglucosaminyltransferase 1 isoform X3"
                     /protein_id="XP_006710819.1"
                     /db_xref="GeneID:55624"
                     /db_xref="HGNC:HGNC:19139"
                     /db_xref="MIM:606822"
                     /translation="MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAV
                     LFLLVTVIVNIKLILDTRRAISEANEDPEPEQDYDEALGRLEPPRRRGSGPRRVLDVE
                     VYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAM
                     VLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGG
                     PVFGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYG
                     SVCSCKDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMIT
                     VFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASLTATFNLFPEAKFAVVL
                     EEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETMPGLG
                     WVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIVGLNM
                     NGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSF
                     LPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIWDLDVRGNHRGLWRLFRKKNHFLMS
                     EEATLSHPNFPGATPKGGGSPRSPRTDMRPPPGPCGAGPGSESNLFIDCPEGLENRPN
                     LEGLDFFLGWNAALRVGLALTQETAVPNPWTGPAGAHMLTQTHSETLRHWTRPPLSLL
                     FVQISKAG"
     polyA_site      2432
                     /gene="POMGNT1"
                     /gene_synonym="GnT I.2; gnT-I.2; GNTI.2; LGMD2O; LGMDR15;
                     MEB; MGAT1.2; RP76"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggggccgcaa gcggcatgga ggaggcggag gccgcggcga gccgggccga gcagtgaggg
       61 ccctagcggg gcccgagcgg ggcccggggc ccctaagcca ttcctgaagt catgggctgg
      121 ccaggacatt ggtgacccgc caatccggta tggacgactg gaagcccagc cccctcatca
      181 agccctttgg ggctcggaag aagcggagct ggtaccttac ctggaagtat aaactgacaa
      241 accagcgggc cctgcggaga ttctgtcaga caggggccgt gcttttcctg ctggtgactg
      301 tcattgtcaa tatcaagttg atcctggaca ctcggcgagc catcagtgaa gccaatgaag
      361 acccagagcc agagcaagac tatgatgagg ccctaggccg cctggagccc ccacggcgca
      421 gaggcagtgg tccccggcgg gtcctggacg tagaggtgta ttcaagtcgc agcaaagtat
      481 atgtggcagt ggatggcacc acggtgctgg aggatgaggc ccgggagcag ggccggggca
      541 tccatgtcat tgtcctcaac caggccacgg gccacgtgat ggcaaaacgt gtgtttgaca
      601 cgtactcacc tcatgaggat gaggccatgg tgctattcct caacatggta gcgcccggcc
      661 gagtgctcat ctgcactgtc aaggatgagg gctccttcca cctcaaggac acagccaagg
      721 ctctgctgag gagcctgggc agccaggctg gccctgccct gggctggagg gacacatggg
      781 ccttcgtggg acgaaaagga ggtcctgtct tcggggagaa acattctaaa tcacctgccc
      841 tctcttcctg gggggaccca gtcctgctga agacagatgt gccattgagc tcagcagaag
      901 aggcagagtg ccactgggca gacacagagc tgaaccgtcg ccgccggcgc ttctgcagca
      961 aagttgaggg ctatggaagt gtatgcagct gcaaggaccc cacacccatc gagttcagcc
     1021 ctgacccact cccagacaac aaggtcctca atgtgcctgt ggctgtcatt gcagggaacc
     1081 gacccaatta cctgtacagg atgctgcgct ctctgctttc agcccagggg gtgtctcctc
     1141 agatgataac agttttcatt gacggctact atgaggaacc catggatgtg gtggcactgt
     1201 ttggtctgag gggcatccag catactccca tcagcatcaa gaatgcccgc gtgtctcagc
     1261 actacaaggc cagcctcact gccactttca acctgtttcc ggaggccaag tttgctgtgg
     1321 ttctggaaga ggacctggac attgctgtgg attttttcag tttcctgagc caatccatcc
     1381 acctactgga ggaggatgac agcctgtact gcatctctgc ctggaatgac caggggtatg
     1441 aacacacggc tgaggaccca gcactactgt accgtgtgga gaccatgcct gggctgggct
     1501 gggtgctcag gaggtccttg tacaaggagg agcttgagcc caagtggcct acaccggaaa
     1561 agctctggga ttgggacatg tggatgcgga tgcctgaaca acgccggggc cgagagtgca
     1621 tcatccctga cgtttcccga tcctaccact ttggcatcgt cggcctcaac atgaatggct
     1681 actttcacga ggcctacttc aagaagcaca agttcaacac ggttccaggt gtccagctca
     1741 ggaatgtgga cagtctgaag aaagaagctt atgaagtgga agttcacagg ctgctcagtg
     1801 aggctgaggt tctggaccac agcaagaacc cttgtgaaga ctctttcctg ccagacacag
     1861 agggccacac ctacgtggcc tttattcgaa tggagaaaga tgatgacttc accacctgga
     1921 cccagcttgc caagtgcctc catatctggg acctggatgt gcgtggcaac catcggggcc
     1981 tgtggagatt gtttcggaag aagaaccact tcctgatgag tgaagaagcc accctcagtc
     2041 accccaattt tcctggagcc acccccaaag gaggagggag ccccaggagc cccagaacag
     2101 acatgagacc tcctccagga ccctgcgggg ctgggcctgg ctcagaatct aacctattta
     2161 ttgactgtcc tgagggcctt gaaaacaggc cgaacctgga gggcctggat ttctttttgg
     2221 gctggaatgc tgccctgagg gtggggctgg ctcttactca ggaaactgct gtgcccaacc
     2281 catggacagg cccagctggg gcccacatgc tgacacagac tcactcagag acccttagac
     2341 actggaccag gcctcctctc agccttctct ttgtccagat ttccaaagct ggataagttg
     2401 gtcattgatt aaaaaaggag aagccctctg gg
//
