LOCUS       XM_047423729            2149 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RNA polymerase I subunit E (POLR1E),
            transcript variant X1, mRNA.
ACCESSION   XM_047423729
VERSION     XM_047423729.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..2149
                     /gene="POLR1E"
                     /gene_synonym="A49; PAF53; PRAF1; RPA49"
                     /note="RNA polymerase I subunit E; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     ESTs, 265 long SRA reads, 1 Protein, and 91% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 164 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:64425"
                     /db_xref="HGNC:HGNC:17631"
     CDS             209..1654
                     /gene="POLR1E"
                     /gene_synonym="A49; PAF53; PRAF1; RPA49"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase I subunit RPA49
                     isoform X1"
                     /protein_id="XP_047279685.1"
                     /db_xref="GeneID:64425"
                     /db_xref="HGNC:HGNC:17631"
                     /translation="MYQASAVSLLPRDIPSCHSPSPGFSHLPTSSSQLAPDLLQFPLG
                     QDPSFLAIPILTLPPSDSLVPPYIVWYIVWPSALISFLGCTLTVQFSNGKLQSPGNMR
                     FTLYENKDSTNPRKRNQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQ
                     MEVYDAELFNMQPLFSDVSVESELALESQTKTYREKMDSCIEAFGTTKQKRALNTRRM
                     NRVGNESLNRAVAKAAETIIDTKGVTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVY
                     KFEDLLSPAEYEALQSPSEAFRNVTSEEILKMIEENSHCTFVIEALKSLPSDVESRDR
                     QARCIWFLDTLIKFRAHRVVKRKSALGPGVPHIINTKLLKHFTCLTYNNGRLRNLISD
                     SMKAKITAYVIILALHIHDFQIDLTVLQRDLKLSEKRMMEIAKAMRLKISKRRVSVAA
                     GSEEDHKLGTLSLPLPPAQTSDRLAKRRKIT"
ORIGIN      
        1 cccctctagt ctccaccact cccctgggct ctgtcagggc tcccctgtcc gtctttctgt
       61 cactacctcc cagccagatt gggacatccc actcacccgc tccccagagc tgtgtccagg
      121 accctgctga ccccctcacc caccaggtct cccgcctccc ccatttccct ctcttcactg
      181 ggcaggggtt ccttctgtca ctttaggtat gtaccaggcc tctgctgtca gcctccttcc
      241 gcgagacatt ccctcctgtc acagcccctc cccagggttc tcccacctcc ctacctcctc
      301 ttctcagctg gccccggatc tcctccagtt ccctttgggt caggacccga gcttccttgc
      361 catccccatt ctgacactcc ctcccagtga cagtctagtc ccaccgtaca ttgtgtggta
      421 cattgtgtgg ccttctgctc tcatctcatt cttgggctgc actcttacag tccagttctc
      481 caacgggaag ctacagagtc caggcaacat gcgctttacc ttgtatgaga acaaagattc
      541 caccaacccc aggaagagga atcaacggat cctggcagct gaaacagata ggctctccta
      601 tgtgggaaac aattttggga ctggagccct caaatgcaac actttgtgca ggcactttgt
      661 gggaattttg aacaagacct ctggccaaat ggaagtatat gatgctgaat tgttcaacat
      721 gcagccacta ttttcagatg tatcagttga gagtgaactg gcgctagaga gtcagaccaa
      781 aacttacaga gaaaagatgg attcttgtat tgaagccttt ggtaccacca aacagaagcg
      841 agctctgaac accaggagaa tgaacagagt tggcaatgaa tctttgaatc gtgcagtggc
      901 taaagctgca gagactatca ttgatacgaa gggtgtgact gctctggtca gcgatgctat
      961 ccacaatgac ttgcaagatg actccctcta ccttcctccc tgctatgatg atgcagccaa
     1021 gcctgaagac gtgtataaat ttgaagatct tctttcccct gcggagtatg aagctcttca
     1081 gagcccatct gaagctttca ggaacgtcac gtcagaagaa atactgaaga tgattgagga
     1141 gaacagccat tgcacctttg tcatagaagc gttgaagtct ttgccatcag atgtggagag
     1201 ccgagaccgc caggcccgat gcatatggtt tctggatacc ctcatcaaat ttcgagctca
     1261 tagggtagtt aagcggaaaa gtgctctggg acctggagtt ccccacatca tcaacaccaa
     1321 actgctgaag cactttactt gcttgaccta caacaatggc agattacgga acttaatttc
     1381 ggattctatg aaggcgaaga ttactgcata tgtgatcata cttgccttgc acatacatga
     1441 cttccaaatt gacctgacag tgttacagag ggacttgaag ctcagtgaga aaaggatgat
     1501 ggagatagcc aaagccatga ggctgaagat ctccaaaaga agggtgtctg tggccgccgg
     1561 cagtgaagaa gatcacaagc tgggcaccct gtccctcccg ctgcctccag cccagacctc
     1621 agaccgcctg gcaaagcgga ggaagattac ctagacgcat gctttccaga cagggcgttt
     1681 tggctgcatc acagccactg gctggtccta ttcatttcca tttttatgta tgttttgaaa
     1741 agaaaaggtc cggggatggt ggctcacacc tgaaatccca gcactttggg aggccgaggc
     1801 aggaagatca ttgagctcag gagtttgaaa ccagtctgga caacataggg agaccccatc
     1861 tctaccggag gaaaaaaaaa agagtcaggc ctggtggtgt gcgcctgtaa tcccagctac
     1921 tcgggaggct gaggcaggac gattacttga gcttgggaaa tcaaggttgc agtgagctat
     1981 gattgtgtgg ccacactcca tcctgggtca cagagtgaga ccttgtctca aaaaagtaac
     2041 ataaggaaaa aagaagcctt gctttagcac aggtatgaag ccagaagcca gcatctcaac
     2101 tgtgcttgtc ttatgcagaa atataaagcg atggccaggt tggacttca
//
