LOCUS       XM_011509814            6274 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens pogo transposable element derived with KRAB
            domain (POGK), transcript variant X2, mRNA.
ACCESSION   XM_011509814
VERSION     XM_011509814.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011509814.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6274
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..6274
                     /gene="POGK"
                     /gene_synonym="BASS2; KRBOX2; LST003"
                     /note="pogo transposable element derived with KRAB domain;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 33 ESTs, 970 long SRA reads, 1
                     Protein, and 97% coverage of the annotated genomic feature
                     by RNAseq alignments, including 33 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:57645"
                     /db_xref="HGNC:HGNC:18800"
                     /db_xref="MIM:620039"
     CDS             656..2485
                     /gene="POGK"
                     /gene_synonym="BASS2; KRBOX2; LST003"
                     /codon_start=1
                     /product="pogo transposable element with KRAB domain
                     isoform X1"
                     /protein_id="XP_011508116.1"
                     /db_xref="GeneID:57645"
                     /db_xref="HGNC:HGNC:18800"
                     /db_xref="MIM:620039"
                     /translation="MESTAYPLNLSLKEEEEEEEIQSRELEDGPADMQKVRICSEGGW
                     VPALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEGE
                     EESQNSDEWQLQGGTSAENEESDVKPPDWPNPMNATSQFPQPQHFDSFGLRLPRDITE
                     LPEWSEGYPFYMAMGFPGYDLSADDIAGKFQFSRGMRRSYDAGFKLMVVEYAESTNNC
                     QAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAK
                     GDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYDLSLRHKVPVPQHLPED
                     LTEKLVTYQRSVLALRRAHDYEVAQMGNADETPICLEVPSRVTVDNQGEKPVLVKTPG
                     REKLKITAMLGVLADGRKLPPYIILRGTYIPPGKFPSGMEIRCHRYGWMTEDLMQDWL
                     EVVWRRRTGAVPKQRGMLILNGFRGHATDSVKNSMESMNTDMVIIPGGLTSQLQVLDV
                     VVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLGLFLEWVMVAWNSISSESIVQG
                     FKKCHISSNLEEEDDVLWEIESELPGGGEPPKDCDTESMAESN"
ORIGIN      
        1 gaaatggggc aagatggctg gagaaatccg aacgcgcccg ggggcgcggc ggcggtggcg
       61 caggcggggc agggcgggcg gcggccctgg ttgcggcacc ttagcgcggg gaggcggccc
      121 ctcccacctc tgccccggag ccggcaggga gaccgccgcc aagttcgggc cccagctgca
      181 ggcatctgaa gcctagaccc atccatgccg cgttcgccta tcttttttgg aaatatcgaa
      241 ggaaccgact ttgaactcca gagggatctt ttctttggag gttccccgat gcagccctca
      301 agatgcatcc gcactccaca cctaggaatt gcccgcgccc atagagggca ggagtgcggc
      361 cctttgtact ggccaagagt cagcgaatag agaatttgca gcccagaggc aatgggttat
      421 ttccctgtcg gggtgggccc cagccgattt ctgcaccttt ttgggtatcc aggcataacc
      481 ctcactatgt ttcactgact cctgcgtttg caaagtccct taaggtagaa tgaccctatt
      541 ttctgaacca gctcgtggac agaacctttg aatttggaaa atccaggcaa tgggcctact
      601 gagccaaccg ctccgcccat gcttaactgg cttctagcac ccattccagt tgaagatgga
      661 gtccacagcc taccctctca atttgagcct gaaagaagag gaagaggaag aagagattca
      721 gagccgggaa ctagaggacg gcccggcaga catgcagaaa gtacgaatct gctctgaggg
      781 cggatgggta ccggccctat ttgatgaggt ggccatatat ttttccgatg aggaatggga
      841 agttttgacg gagcaacaaa aggccctcta ccgggaagtc atgaggatga attatgaaac
      901 tgtcctgtcc ctggaattcc cattccctaa gccagacatg atcacccgtt tggaagggga
      961 ggaggagtct cagaattctg acgagtggca gctccaagga ggcacctctg cagaaaatga
     1021 agaatctgac gtaaagcctc cagactggcc aaacccaatg aatgctacct cccagtttcc
     1081 tcagcctcag cactttgaca gctttggcct ccgtctgcct cgggatatca cagagctgcc
     1141 cgagtggagt gaggggtacc ccttctacat ggccatgggc ttcccagggt atgacctctc
     1201 ggctgatgac atagctggga agtttcagtt cagccggggc atgcgccgca gttacgacgc
     1261 agggttcaag ctgatggtag tggaatatgc tgagagtacc aacaactgcc aggctgccaa
     1321 gcagtttgga gtattggaaa aaaacgttcg agactggcgc aaagtgaagc cacagcttca
     1381 aaacgcccac gccatgcggc gggcattccg aggccccaag aatgggaggt ttgctctggt
     1441 ggaccagcgt gtggccgaat atgtcagata catgcaggcc aaaggggacc ccatcacccg
     1501 ggaggcgatg cagctgaaag ctctcgaaat cgcccaggaa atgaacattc cagagaaagg
     1561 gttcaaggca agcttgggtt ggtgtcgaag aatgatgaga aggtatgacc tgtctctgag
     1621 gcataaagtg cccgtgcccc agcacctgcc ggaagacctg actgagaaac tcgtcactta
     1681 ccagcgcagt gtcctggctc tgcgcagggc gcatgactat gaggtagctc agatggggaa
     1741 tgcagatgag acgcccattt gtttagaggt gccatcacgg gtaactgttg ataaccaggg
     1801 cgaaaagcct gtcttggtca agacaccagg cagggaaaaa ctgaaaatca cagcaatgct
     1861 tggtgtcttg gctgatggga ggaagttacc accgtacatc attttgaggg gaacatatat
     1921 ccccccgggg aagtttccca gtgggatgga aattcgctgc caccggtatg ggtggatgac
     1981 tgaagacttg atgcaggact ggttggaagt ggtgtggaga cggaggacag gagcagtgcc
     2041 caagcagcga gggatgctga tcttgaatgg cttccggggc catgccacag attccgtgaa
     2101 gaactccatg gaaagcatga acactgacat ggtgatcatc ccagggggtc tgacctcaca
     2161 gcttcaggtg ctggatgtcg tggtctacaa gccactgaat gacagtgtgc gggcccagta
     2221 ctccaactgg cttctggctg ggaacctggc gctgagccca accgggaatg ctaagaagcc
     2281 acccctgggc ctctttctgg agtgggtcat ggtcgcgtgg aatagcatct caagtgagtc
     2341 catcgtccaa gggttcaaga agtgccatat ctccagcaac ttggaggagg aagacgatgt
     2401 cctgtgggaa atcgagagtg agttgccagg aggaggagaa ccaccaaaag attgtgacac
     2461 cgaaagcatg gctgagagca actgaaggga aagggaaagc aaatggaact ctgatttaaa
     2521 cagctgggga tgaaattcct caagatgatt attcctgaaa gtgtggatgc gctggatgcg
     2581 cagggaacat caggaaaagg ccacggggct ctgaacagcc ccggtccaga cagcagcctg
     2641 tacatccatc ccaggacaca gcccagcccc tccccacacc atacaaggta tcagaaaagt
     2701 ctaggaccta tcatttcatc agagacatga tcagaaaaga aactgcttct gccccatttc
     2761 ttgttttgga gattactcca tctgtccatc aaaagaaacc tgtaaatatg aaagaacaaa
     2821 ggttatttcc tggagaaaag acaatttatt caacaccaac gagggactca tcatatgggc
     2881 acaactctgg tgtccttcta tggagaaaac ctcaagtaaa gttttattct gcctttgaaa
     2941 atgcttccaa aagtagaccc tgtccccaca caggtcaaga ctacagagaa ggctttgtag
     3001 aaatgtgtca cctatgtaca cctgctactt acacatttcc tcttttggaa aaatgagata
     3061 cttagaataa caagaaaatt aagacatact ggcctggtgc cagcagatgg cttttctata
     3121 gacaaactag gttagtgtgg aagatatagg ttaaaataaa ctatgctgtt ttatttatct
     3181 tcccaacctg attggcagct agactttttt agggtctcat ttaatggccc tgtttttttc
     3241 attattatat ttaatgatag ggcaggattt cgtatgcaag ctcttgtttc tcaggctgcc
     3301 tgcagaagaa gtcgctataa attatctgtt gtctacatgg tacaaggccc attgactcat
     3361 ctgatgcttg ttttgttaat ttctttaata tttttatcac ggggcagtgg gagggcttgg
     3421 gcttttagcc acagctgttt taagacttct gatctcctgc cctgcaggaa taggtgggaa
     3481 gtcattgaat ttttacacta tagtaatttg cattcccaca taagtttgag tgttacgaaa
     3541 acattccttt aaagggatct gtgctacaca aaatatgcca ggacctcaca gacaaagcca
     3601 ttgctagaaa tgtcattcca atgatcagat ctggaaacag gctgccataa ccacttttcc
     3661 ttcttgtaga ctcagctcac ctgtatattt aaactgttct tggcatcttg aaacacctat
     3721 ttctactcag gtactcattg tcctgttact gattcacctt tctgatcctt ttcaaccagt
     3781 tttcccccaa ggggggaaat tttacttaac ctctagtatt tgaacaactc aatatttgaa
     3841 ttgttgcccc atttgctttt acctgtactg tattcttggt catctcaaat ggcgtctaaa
     3901 cccagctact ttgcattcca gaagtttcca ttccctccaa ttccacctaa tttttcatct
     3961 gtcctagtta ctggctcttt cttcatgtct tatttctctt gctttgggag cttaaaagat
     4021 tttacaagac ctaattttgg gttccttcct tggagccata gttaccctgc caagaagagt
     4081 agaaaatggg ttcaactcct gtttcgctcc accaacacct ctgtgagtct catcatcagc
     4141 tgagcgatga tgccttacag gttgcatagc actggaactt tcctagagta acggctctgc
     4201 tgccagggtt tctctgggct cattcttcca ctgacttaat tatgatctat gcctaacaga
     4261 gccccagtac aactattttg cagaatggct gttaccctag aattactata gcacatattg
     4321 agatatagtt gtactcccta gtagatagga actgacccca acaataaact ttgataataa
     4381 agacaatagg ctatggtgat tttatttctt tacctattag cattgtgaaa agttacattc
     4441 aaggtattgg ctacacctta ttctccatcc ggtttggtac caatatatta catctttcag
     4501 tcaaaaagtg ttcatgagat gcagtgtaag taatattggt atctgtgaag acacagggaa
     4561 gaacgtgtgc agtggggcaa gtttgacata aatagctttt ttcctcagtc atgttttgta
     4621 tgctctcagc agtggtacat taccaaaatc acatgaaaga aatcccataa agggatctga
     4681 attttaaatg aaagtatgat gaacccgcaa gtcttaatta tgcactttta ataaaattag
     4741 tcctgacaat ttacagtgcc cataaagtag tagttgattc tccaggaata atctggcagt
     4801 gttatttttc cttttcaacc catcagcatt aaatgctgag ccactctcca agtctgaccc
     4861 ctagactaag cttccttact cttactcttc ctcccagagg cattttggaa tgagtcaaag
     4921 gcatggtagg acacggcatt tacctgtggt catcacttca ggcaatggaa aggaaaagtg
     4981 tttgtccttg gttgatcaga gaagtgggtg ataagaacgt gctaaataac aaacctgcac
     5041 acttgtacct ctgaacctaa aatgtttttt ttttaattca gaacaacaaa agaacatgct
     5101 aagcgagtcc tcccacctgc ctggtaaaat acagccagct ttatcacacc tggttttgca
     5161 cagtgataaa ttcctgcagg aaaaaataag ttttattcta agtctgaaat tatatggttt
     5221 ccaacagctt tttccctcgt taaaataatt atttttctac atgatgcttg ataataagca
     5281 tttgtttctt aacctaatta gagaagcgat tgcactcgag tccccacagc tggcagtggt
     5341 gttacagatg gaaccagcct ttggtggaca gagttcagat gtttcagggg ctcttgtgaa
     5401 aatgctaagt attactgttt ctaccttact gccctgcact ttaccccatc atctcccctc
     5461 cttagaaaat gatttcatag gaaaattggc atggagagca gatagtagag tgtagacctg
     5521 aaatacatga ggcaaaggca gtcttccagc attctatggt cccaccaggt gggtaggtga
     5581 ctaggaattc aggccaggtc ctagagagta gtgagaagtt ttccagtttg cagtttcctc
     5641 tgtgctgtat gtacagccat acagcctatg gaacctgaca ttgcagtggg cagcaggaca
     5701 cggtcaaggc tcctagctgc ctctccatct atggaactat gaaatttcac acatattccc
     5761 taggcagcat taaggcccag gtatattgag tagtccaaac caaaaaacta tattcgagta
     5821 tcagtttaaa ttcttccaag ccctaaaaat tcttacgtag tttctcacct aaaactaatg
     5881 gcttgtgcca agaactgaaa ctaagctatt gatttttttt taagaagtct taatctatac
     5941 ataagaaatt acatacctgg ccaggtgcag tagttcaggc ctgtaatcct aacaaacact
     6001 ctgggaggcc aaggtgggca gactgcttga gctcaggagt tcattaccag tctgggcaac
     6061 atgataaaac cgtgtcttta caaaaaaaaa aaattttaaa ttagccgggc atggtggtgt
     6121 gaatctgtag tcccagctac ttaggaggtt gcgatgggag aatcacctga gcccagaggt
     6181 ccagtctgca gtgagccatg atcacaccac agcactccag ctggggtgac agagtgagac
     6241 cctatctcaa aaagaaaaga aaaaaaaaaa aaaa
//
