LOCUS       NM_001029869            1919 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens PLAC8 like 1 (PLAC8L1), mRNA.
ACCESSION   NM_001029869 XM_087761
VERSION     NM_001029869.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Song,W.Y., Hortensteiner,S., Tomioka,R., Lee,Y. and Martinoia,E.
  TITLE     Common functions or only phylogenetically related? The large family
            of PLAC8 motif-containing/PCR genes
  JOURNAL   Mol Cells 31 (1), 1-7 (2011)
   PUBMED   21347707
  REMARK    Review article
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Libault,M. and Stacey,G.
  TITLE     Evolution of FW2.2-like (FWL) and PLAC8 genes in eukaryotes
  JOURNAL   Plant Signal Behav 5 (10), 1226-1228 (2010)
   PUBMED   20855956
REFERENCE   3  (bases 1 to 1919)
  AUTHORS   Harrington,J.J., Sherf,B., Rundlett,S., Jackson,P.D., Perry,R.,
            Cain,S., Leventhal,C., Thornton,M., Ramachandran,R.,
            Whittington,J., Lerner,L., Costanzo,D., McElligott,K., Boozer,S.,
            Mays,R., Smith,E., Veloso,N., Klika,A., Hess,J., Cothren,K., Lo,K.,
            Offenbacher,J., Danzig,J. and Ducar,M.
  TITLE     Creation of genome-wide protein expression libraries using random
            activation of gene expression
  JOURNAL   Nat Biotechnol 19 (5), 440-445 (2001)
   PUBMED   11329013
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC091887.3 and BG198388.1.
            
            On Nov 23, 2018 this sequence version replaced NM_001029869.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803613.68541.1,
                                           SRR5189667.380346.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000311450.9/ ENSP00000309087.4
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1385              AC091887.3         88420-89804         c
            1386-1522           AC091887.3         82383-82519         c
            1523-1659           AC091887.3         69688-69824         c
            1660-1918           AC091887.3         68541-68799         c
            1919-1919           BG198388.1         390-390
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5q32"
     gene            1..1919
                     /gene="PLAC8L1"
                     /note="PLAC8 like 1"
                     /db_xref="GeneID:153770"
                     /db_xref="HGNC:HGNC:31746"
     exon            1..1385
                     /gene="PLAC8L1"
                     /inference="alignment:Splign:2.1.0"
     CDS             1267..1800
                     /gene="PLAC8L1"
                     /codon_start=1
                     /product="PLAC8-like protein 1"
                     /protein_id="NP_001025040.1"
                     /db_xref="CCDS:CCDS34264.1"
                     /db_xref="GeneID:153770"
                     /db_xref="HGNC:HGNC:31746"
                     /translation="MNWFGSNFFRCPEDLSLLNIYSPLLSHMSSEDEHFISNLRGHVP
                     ASAVVKQPVRGASGRTTITAIVQTGGGWSTGLFSVCRDRRICFCGLFCPMCLECDIAR
                     HYGECLCWPLLPGSTFALRIGTRERHKIQGTLCEDWLAVHCCWAFSICQVARELKMRT
                     SQVYEICAVPMTKDTLV"
     exon            1386..1522
                     /gene="PLAC8L1"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..1659
                     /gene="PLAC8L1"
                     /inference="alignment:Splign:2.1.0"
     exon            1660..1919
                     /gene="PLAC8L1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1900..1905
                     /regulatory_class="polyA_signal_sequence"
                     /gene="PLAC8L1"
                     /note="hexamer: AATAAA"
     polyA_site      1919
                     /gene="PLAC8L1"
                     /note="major polyA site"
ORIGIN      
        1 caaagctagt aatcacctct taatttctgt tattcttata aacctgaatt ttcatgtagg
       61 gcacatttat tcaacaaatt attgagtgct ttttatgtgc cagacactgt ggtcagcact
      121 tggaatagag tagtaagcag aaaaaacata cctgtcctta atgtagggta catccttact
      181 gttaagaaga caatgacagt tgcccagaac cccatgattg aaggcagtta tgaagctatg
      241 tctgaggaat cttgatttgg aaggtattat aggcttttcc taacaacctg gttcaataaa
      301 tgctttgaag ttcagaaccc taagcaacca ttctctatgg gtctgatgaa aagaatatat
      361 gatataattg gcagtatcct cctgatgtct ttctaatgta atgtcaaatt atgattgcag
      421 agccctttcc tcaacgtgaa attttgccta attttttgtc ttaggatatt tcctaatatt
      481 tctagggtcc acacctccat aagacatgtg ccagaggcat gattcagagg ctcctgagac
      541 cttgaggatt cagagctgtt gtgaggacat caccaggcaa gccttgcttc agttactaga
      601 ttccgtctgg actgggtagg aaagaaatgc cactttcctg gcattatcaa tgaagttaat
      661 ggaagagcag agaatttcta gaagttctga aaaggctttg aggcttgtga caatctacca
      721 tagctcaaac ttgaggagac cacctttcat aagatggatt caaatacaat acctgcgctg
      781 aaagactttt ttttgctcct gcttttgggt tggctatggg acttgcatca tctggctgaa
      841 ttggaccagc agttcagggg atgaagagag gtctctgctg cttctcagtc acatggcatg
      901 gcagaaattt tcagccttct gaatcttcca aggaacggtc aagtggcact tagctagata
      961 aatgtttact agaggcatct cttaaagagt tttccaccaa agataagtct ttttcttcta
     1021 tttactctat actccagcaa tatctcccta cagattagta agatgaatgt gtccacagtt
     1081 aggtgtatac ctgtttttaa agaaaaaaga tgtctgttag ttacactgct atgacctcag
     1141 gttccagaat attaagggaa cattctttca agagatgttt cactttggac taatccgaag
     1201 tttagaaacc agcttattgc caaagggaaa aaggatagcc caaaggacaa gaaaacactt
     1261 ctcactatga attggtttgg aagtaacttc ttcaggtgtc ctgaggatct ttccttactc
     1321 aacatatact cacctctgtt gtcacacatg tcatctgaag atgaacattt tatttccaac
     1381 ttgagaggcc atgtaccagc cagcgctgtg gtgaagcagc ctgttcgggg agccagtggc
     1441 aggacgacaa tcacagcaat tgtccagact ggcgggggct ggagcaccgg tctcttcagt
     1501 gtctgcagag ataggagaat ttgtttctgt ggtctattct gtcctatgtg tcttgagtgt
     1561 gacatcgcca ggcattatgg agagtgtctt tgttggccgt tgttacctgg gtccaccttt
     1621 gcactgagaa ttggcaccag ggagagacat aaaatacagg gcacactgtg tgaagactgg
     1681 ctggcggtgc actgctgttg ggctttttcc atctgccagg tggcccggga actcaagatg
     1741 aggacctccc aagtctatga aatctgtgca gtcccaatga ctaaggacac cctggtttga
     1801 cagcaagata actcctcctc cttactcccc aacaccctcc tctcaaacct ctcagtggaa
     1861 caattgcttt ttcctaagtt tttactgaaa tggtatgaaa ataaatgatt tccccccta
//
