LOCUS       XM_024450258            4840 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens polycystin 1 like 3, transient receptor
            potential channel interacting (PKD1L3), transcript variant X5,
            mRNA.
ACCESSION   XM_024450258
VERSION     XM_024450258.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000016.10) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
     gene            1..4840
                     /gene="PKD1L3"
                     /note="polycystin 1 like 3, transient receptor potential
                     channel interacting; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:342372"
                     /db_xref="HGNC:HGNC:21716"
                     /db_xref="MIM:607895"
     CDS             194..4840
                     /gene="PKD1L3"
                     /codon_start=1
                     /product="polycystin-1-like protein 3 isoform X5"
                     /protein_id="XP_024306026.1"
                     /db_xref="GeneID:342372"
                     /db_xref="HGNC:HGNC:21716"
                     /db_xref="MIM:607895"
                     /translation="MPAVPILWEAKSKTLCHPISQFPSVLSSITSQVTSAASEPSSQP
                     LPVITQLTMPVSVTHAGQSLAETTSSPKEEGHPNTFTSYLQVSLQKASGQVIDEIAGN
                     FSRAVHGLQALNKLQEACEFLQKLTALTPRFSKPAQVNLINSLIYLSEELLRIPFQNN
                     NSLGFKVPPTVCPFHSLNNVTKAGEGSWLESKRHTEPVEDILEMSLVEFGNIGEAFLE
                     QNQSPESSVTLTSANATLLLSRQNISTLPLSSYTLGHPAPVRLGFPSALALKELLNKH
                     PGVNVQITGLAFNPFKDLDNRNIVGSIGSVLLSANRKLLQVHDLMEDIEIMLWRNVSL
                     ETHPTSLNMSTHQLTITVNVTSLEKSLIVSIDPDSPLLMTLYLGFQYQPNCTHFHLNI
                     TLPKDKVWQKDEEYTWVLNPEHLQHGIGTYYITAVLSERQEGAQQTPSLVSVITAVTQ
                     CYYWEIHNQTWSSAGCQVGPQSTILRTQCLCNHLTFFASDFFVVPRTVNVEDTIKLFL
                     RVTNNPVGVSLLASLLGFYVITVVWARKKDQADMQKVKVTVLADNDPSAQFHYLIQVY
                     TGYRRSAATTAKVVITLYGSEGRSEPHHLCDPQKTVFERGGLDVFLLTTWTSLGNLHS
                     LRLWHDNSGVSPSWYVSQVIVCDMAVKRKWHFLCNCWLAVDLGDCELDRVFIPVSKRE
                     LFSFRHLFSSMIVEKFTQDYLWLSIATRHPWNQFTRVQRLSCCMTLLLCNMVINVMFW
                     KINSTTAKRDEQMRPFAVAWSELLVSIHTAVILFPINLVIGRLFPLIEPQETLPLFPP
                     IQASCLSDASVEPLSATMVVEELKETVRFLLRRNTYLLSKCEQPPWSSWDITKLVKLL
                     SSLVSSHLEGQGCHQQGERHWARVVPENHHHFCCYLHRVLQRLKSHLGTLGLTQGHQS
                     CDFLDAASQLQKLQELLETHILPTEQEPSREVTSFAILSSEEGKKPISNGLSKWLTSV
                     CWLLLGFTSLASAFFTALYSLELSKDQATSWMISIILSVLQNIFISQPVKVVFFTFLY
                     SLMMSRMPRLNKENEQQTKRILALLAKCSSSVPGSRDKNNPVYVAPAINSPTKHPERT
                     LKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSHQFSEIKLLQD
                     FYPWANHILLPSLYGDYRGKNAVLEPSHCKCGVQLIFQIPRTKTYEKVDEGQLAFCDN
                     GHTCGRPKSLFPGLHLRRFSYICSPRPMVLIPTDELHERLTSKNENGFSYIMRGAFFT
                     SLRLESFTSLQMSKKGCVWSIISQVIYYLLVCYYAFIQGCQLKQQKWRFFTGKRNILD
                     TSIILISFILLGLDMKSISLHKKNMARYRDDQDRFISFYEAVKVNSAATHLVGFPVLL
                     ATVQLWNLLRHSPRLRVISRTLSRAWDEVVGFLLIILILLTGYAIAFNLLFGCSISDY
                     RTFFSSAVTVVGLLMGISHQEEVFALDPVLGTFLILTSVILMVLVVINLFVSAILMAF
                     GKERKSLKKEAALIDTLLQKLSNLLGISWPQKTSSEQAATTAVGSDTEVLDELP"
ORIGIN      
        1 caatagcaag agacaaaatg cccccaggac ctggtcatct tccaaccaca tgtcactatc
       61 ctcttcctgc tcatctttct ttcacaggtc ccaaatctaa ccccttctca ccatggtcac
      121 cacgatcacc acatggtcca agtcaccatc tcccatctga actttcacgt ttgctggctt
      181 ggtgcggtgg cttatgcctg cagtccccat actttgggag gccaagtcca agaccctgtg
      241 tcatcccatc agccagtttc cttcagtact atcaagtatc acatcacagg taacatcagc
      301 cgcatctgaa cccagcagcc agcctctccc tgtgataaca cagctcacca tgcccgtgtc
      361 tgtcacgcat gctgggcaat ctctggcaga aacaacttca agcccaaagg aagaaggtca
      421 tccgaatacc ttcacctctt atctacaagt gtcattgcag aaggcatctg gtcaggtcat
      481 agatgagata gcagggaact tcagcagagc agttcatggt ttgcaagctc ttaacaaact
      541 acaggaagct tgtgagttcc tccagaaact aacagcctta accccaagat tttctaagcc
      601 agctcaggtt aatctcatca attcccttat ttacctgagt gaggagttac tcaggatccc
      661 atttcagaac aacaacagtc tgggcttcaa agttcctcca actgtctgcc cctttcattc
      721 cctcaacaat gtcaccaaag ctggagaagg aagttggctg gaatccaagc gtcatactga
      781 gccggtagaa gacatcctgg aaatgtcctt ggtggagttt gggaatatcg gggaagcatt
      841 tctagagcag aaccagtctc ccgagtcttc agtgactttg acctctgcca atgctactct
      901 gctgctgagc agacaaaaca tatcaacttt accgctgagc tcttacactc tgggtcaccc
      961 agcccctgtg aggctaggct ttccgtcggc tttagctttg aaggagctct tgaataaaca
     1021 tccaggagtt aatgtccaaa taacaggact agctttcaat cccttcaagg atttggacaa
     1081 cagaaacatt gttggaagca ttggaagtgt gttactaagc gctaatcgta aattgctcca
     1141 agtccatgat ttaatggagg acattgagat catgctctgg agaaatgtta gcttggaaac
     1201 ccatcccacc agcctcaaca tgagcacaca tcagcttaca atcacagtga acgtcacttc
     1261 cttggagaaa tccttgatag tgagcataga tcctgacagt ccccttttaa tgacactcta
     1321 cctggggttc cagtatcagc ctaactgcac tcacttccac ctgaacatca cccttccaaa
     1381 ggataaggtg tggcaaaaag atgaggagta cacgtgggtg ctgaatccag agcatctgca
     1441 gcacgggatt ggcacctact atataacagc tgtgctgagt gagaggcagg agggtgctca
     1501 gcagacaccc agcttggtct cggtcatcac cgccgtcact cagtgttact actgggagat
     1561 ccacaaccag acatggagca gcgccggatg ccaagttggg ccacagagca caattctgag
     1621 gacacagtgt ctctgtaacc acctgacctt ctttgccagc gacttctttg tcgtgcccag
     1681 gaccgtgaat gttgaagaca cgatcaaact gttccttcgc gtgaccaaca atcctgttgg
     1741 ggtgtcactg ctggccagcc ttttaggatt ttatgtgatc acagttgtgt gggctcggaa
     1801 aaaggatcaa gcagatatgc agaaggtgaa ggtcactgtc ctggctgata atgaccccag
     1861 cgctcaattt cactacctta ttcaggtcta caccggatat cgaagaagcg ctgctacaac
     1921 agctaaggtt gtcatcaccc tctatggatc agagggacgg agtgagcccc atcacctctg
     1981 tgacccccag aagacagtct ttgaacgagg gggcctggat gtcttccttc tcaccacttg
     2041 gacctctcta gggaacctgc acagccttcg gctctggcat gacaattctg gcgtcagtcc
     2101 ctcctggtat gtcagccagg taattgtctg tgacatggca gttaagagga agtggcattt
     2161 cctgtgcaat tgctggctgg ctgtggacct cggagactgt gagcttgacc gggtcttcat
     2221 cccagtttca aagagagagc tcttttcctt tagacatctg ttttcctcca tgattgtgga
     2281 aaagttcacc caggattatc tgtggctttc aattgcaact cggcatccct ggaaccagtt
     2341 tacaagggtc caacggctgt cttgctgcat gacactgcta ctctgcaaca tggtcatcaa
     2401 tgttatgttc tggaagataa acagcaccac tgccaagaga gatgagcaaa tgcgtccatt
     2461 tgctgtggcc tggtctgaac tgctggtcag catccatact gctgtcatcc tcttcccaat
     2521 caatcttgtc atagggcggc tcttcccgtt gattgagcca caggagactc tgcccctctt
     2581 tcctcccatc caggcctcct gcctctcaga tgcttctgtt gagcctctct ctgccacaat
     2641 ggtagttgag gaattaaagg aaactgtgag attcctgctc aggagaaata catacctact
     2701 ctccaagtgt gagcagccgc catggagttc ttgggacatt actaagctgg tgaaactttt
     2761 atccagcctc gtatcatctc acttggaggg tcaaggctgt catcagcagg gagagcgcca
     2821 ctgggcacgt gttgttcctg aaaaccacca tcatttctgc tgttacctgc atagagttct
     2881 gcagaggctg aaatctcact taggcacgct gggtctcacc cagggtcacc agtcctgtga
     2941 cttcctagat gcagccagcc aacttcaaaa actccaggaa ctcttggaaa cacatattct
     3001 tcccacggag caagagccat ccagggaagt caccagtttt gccatcctga gctcagaaga
     3061 aggaaaaaag cccatctcaa atggcctgtc caaatggttg acttcagtct gctggctcct
     3121 cttaggtttc actagcctgg cttcagcctt ttttacagca ctttatagct tggaattgag
     3181 caaagaccaa gccaccagct ggatgatttc aattatttta tcagtgcttc agaacatctt
     3241 catcagccag ccagtaaagg tggtcttctt cacattctta tactcactga tgatgagcag
     3301 gatgccacgg cttaacaaag agaatgaaca acaaacaaag aggatcttgg cactcttggc
     3361 aaaatgttct tcgtcagtac caggttcaag agataagaac aaccccgtct atgtagcccc
     3421 agctataaat agtccaacta agcacccaga aagaaccttg aaaaagaaga aactcttcaa
     3481 gctgactgga gatattttgg tacaaatcct cttccttacc ctgttgatga ctgcaatcta
     3541 ctctgcaaag aactccaata gattttacct ccaccaagct atctggaaga cattttcgca
     3601 ccagttctcg gaaatcaaac ttcttcagga tttctacccc tgggccaatc atatccttct
     3661 tcctagcctg tatggggatt acagaggtaa gaatgcagtc ctggagccca gtcattgcaa
     3721 atgtggggta caattaattt tccaaatacc ccgtaccaag acctatgaga aagtggacga
     3781 aggtcagctg gcgttttgtg ataacggcca tacctgtggg cgtcccaaga gcctattccc
     3841 tggacttcat ctaaggaggt tcagttacat ctgttcaccc aggcccatgg tgctgattcc
     3901 cactgatgag cttcacgaaa ggctgacaag caagaatgag aatggattca gttacatcat
     3961 gagaggtgct ttcttcacct ctttgagact ggaaagcttc acttcccttc agatgtcaaa
     4021 gaagggctgt gtctggtcta tcatctcaca agtcatctat tatctactgg tctgttacta
     4081 tgccttcata cagggttgtc agctgaaaca gcagaagtgg aggttcttca ctgggaaaag
     4141 aaacattctg gacacaagta taatcctcat tagcttcatc ctcctggggc ttgacatgaa
     4201 gagtatttct ctacataaga aaaacatggc acgataccgc gatgaccagg acagattcat
     4261 cagcttctat gaggcagtaa aagtgaactc tgctgcgact caccttgtgg gcttcccggt
     4321 tctcctggca actgttcagt tatggaacct gctgcgtcat agccccaggc tgcgggtcat
     4381 cagcaggaca ctgagccgag cctgggacga ggtggtgggc tttctgctga tcatcctaat
     4441 cctgctgaca ggctatgcca ttgcctttaa cctgctgttt ggatgcagca tctctgacta
     4501 ccggacattt ttcagctcag cagtgactgt tgttggtctc ctgatgggaa tttctcacca
     4561 agaggaggtt ttcgctttag acccagtcct gggcaccttt ctgatcctca ccagtgtcat
     4621 cttgatggta cttgtggtaa ttaatctttt cgtttcggcc attctcatgg cctttggaaa
     4681 agaaagaaag tcgcttaaga aagaagctgc actaatagat acactgctac agaagctctc
     4741 aaatttgtta ggaatcagtt ggccccaaaa aacctcatct gagcaagcag ccacgacagc
     4801 agtgggcagt gacactgaag ttttagatga actaccttaa
//
