LOCUS       XM_047424933             901 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens decaprenyl diphosphate synthase subunit 1
            (PDSS1), transcript variant X4, mRNA.
ACCESSION   XM_047424933
VERSION     XM_047424933.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..901
                     /gene="PDSS1"
                     /gene_synonym="COQ1; COQ10D2; COQ1A; DPS; hDPS1; SPS;
                     TPRT; TPT; TPT 1"
                     /note="decaprenyl diphosphate synthase subunit 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 86 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 81 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23590"
                     /db_xref="HGNC:HGNC:17759"
                     /db_xref="MIM:607429"
     CDS             12..884
                     /gene="PDSS1"
                     /gene_synonym="COQ1; COQ10D2; COQ1A; DPS; hDPS1; SPS;
                     TPRT; TPT; TPT 1"
                     /codon_start=1
                     /product="all trans-polyprenyl-diphosphate synthase PDSS1
                     isoform X4"
                     /protein_id="XP_047280889.1"
                     /db_xref="GeneID:23590"
                     /db_xref="HGNC:HGNC:17759"
                     /db_xref="MIM:607429"
                     /translation="MASRWWRWRRGCSWKPAARSPGPGSPGRAGPLGPSAAAEVRAQV
                     HRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHTTPDSKTHSGEKYTDPFKLGWRD
                     LKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA
                     SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIA
                     LARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK
                     AVCLCSRMSRPSGA"
     polyA_site      901
                     /gene="PDSS1"
                     /gene_synonym="COQ1; COQ10D2; COQ1A; DPS; hDPS1; SPS;
                     TPRT; TPT; TPT 1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agactccgac catggcctcg cgctggtggc ggtggcggcg cggctgctcc tggaagccgg
       61 cggcgcggag ccccgggccc ggctcccccg gccgtgcggg accgttgggg ccgagcgccg
      121 ctgccgaagt ccgcgcgcag gttcataggc ggaagggact tgacttgtct cagataccct
      181 atattaatct tgtgaagcat ttaacatctg cctgtccaaa tgtatgtcgt atatcacggt
      241 ttcatcacac aaccccagac agtaaaacac acagtggtga aaaatacacc gatcctttca
      301 aactcggttg gagagacttg aaaggtctgt atgaggacat tagaaaggaa ctgcttatat
      361 caacatcaga acttaaggaa atgtctgagt actactttga tgggaaaggg aaagcctttc
      421 gaccaattat tgtggcgcta atggcccgag catgcaatat tcatcataac aactcccgac
      481 atgtgcaagc cagccagcgc gccatagcct taattgcaga aatgatccac actgctagtc
      541 tggttcacga tgacgttatt gacgatgcaa gttctcgaag aggaaaacac acagttaata
      601 agatctgggg tgaaaagaag gctgttcttg ctggagattt aattctttct gcagcatcta
      661 tagctctggc acgaattgga aatacaactg ttatatctat tttaacccaa gttattgaag
      721 atttggtgcg tggtgaattt cttcagctcg ggtcaaaaga aaatgagaat gaaagatttg
      781 cacactacct tgagaagaca ttcaagaaga ccgccagcct gatagccaac agttgtaaag
      841 cagtatgtct ctgttctagg atgtcccgac ccagtggtgc atgagatcgc ctatcagtac
      901 g
//
