LOCUS       XM_017016011            1339 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens decaprenyl diphosphate synthase subunit 1
            (PDSS1), transcript variant X2, mRNA.
ACCESSION   XM_017016011
VERSION     XM_017016011.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017016011.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..1339
                     /gene="PDSS1"
                     /gene_synonym="COQ1; COQ10D2; COQ1A; DPS; hDPS1; SPS;
                     TPRT; TPT; TPT 1"
                     /note="decaprenyl diphosphate synthase subunit 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 ESTs, 825 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23590"
                     /db_xref="HGNC:HGNC:17759"
                     /db_xref="MIM:607429"
     CDS             88..1014
                     /gene="PDSS1"
                     /gene_synonym="COQ1; COQ10D2; COQ1A; DPS; hDPS1; SPS;
                     TPRT; TPT; TPT 1"
                     /codon_start=1
                     /product="all trans-polyprenyl-diphosphate synthase PDSS1
                     isoform X2"
                     /protein_id="XP_016871500.1"
                     /db_xref="GeneID:23590"
                     /db_xref="HGNC:HGNC:17759"
                     /db_xref="MIM:607429"
                     /translation="MSYITELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIH
                     HNNSRHVQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGD
                     LILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKT
                     ASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSA
                     DLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQY
                     CHEAIREISKLRPSPERDALIQLSEIVLTRDK"
ORIGIN      
        1 acaggttcat aggcggaagg gacttgactt gtctcagata ccctatatta atcttgtgaa
       61 gcatttaaca tctgcctgtc caaatgtatg tcgtatatca cggaactgct tatatcaaca
      121 tcagaactta aggaaatgtc tgagtactac tttgatggga aagggaaagc ctttcgacca
      181 attattgtgg cgctaatggc ccgagcatgc aatattcatc ataacaactc ccgacatgtg
      241 caagccagcc agcgcgccat agccttaatt gcagaaatga tccacactgc tagtctggtt
      301 cacgatgacg ttattgacga tgcaagttct cgaagaggaa aacacacagt taataagatc
      361 tggggtgaaa agaaggctgt tcttgctgga gatttaattc tttctgcagc atctatagct
      421 ctggcacgaa ttggaaatac aactgttata tctattttaa cccaagttat tgaagatttg
      481 gtgcgtggtg aatttcttca gctcgggtca aaagaaaatg agaatgaaag atttgcacac
      541 taccttgaga agacattcaa gaagaccgcc agcctgatag ccaacagttg taaagcagtc
      601 tctgttctag gatgtcccga cccagtggtg catgagatcg cctatcagta cggaaaaaat
      661 gtaggaatag cttttcagct aatagatgat gtattggact tcacctcgtg ttctgaccag
      721 atgggcaaac caacatcagc tgatctgaag ctcgggttag ccactggtcc tgtcctgttt
      781 gcctgtcagc agttcccaga aatgaatgct atgatcatgc gacggttcag tttgcctgga
      841 gatgtagaca gagctcgaca gtatgtacta cagagtgatg gtgtgcaaca aacaacctac
      901 ctcgcccagc agtactgcca tgaagcaata agagagatca gtaaacttcg accatcccca
      961 gaaagagatg ccctcattca gctttcagaa attgtactca caagagataa atgacaactc
     1021 tttctgttct ttctggcagc tatcttacca gactgtgcct aaagaatttt gtggaataca
     1081 ctttgtttgc ttcatgtgca gataaccaaa aatcatttta aaagatatca aacttattga
     1141 tgggcaattt attttttttt attgcaaaag ttttttcaga aaacttttta aatgtaatta
     1201 ataaaccacc tgaatctgtc attctagtcc tataaattat aatcaaggta tcttgatggt
     1261 tatatgtggt attgtttaca ctgttaatat ccacatgtaa ggccattaca caaataaata
     1321 accaatgtta aaattcaaa
//
