LOCUS       XM_011535000            7466 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PDS5 cohesin associated factor B (PDS5B),
            transcript variant X5, mRNA.
ACCESSION   XM_011535000
VERSION     XM_011535000.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011535000.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7466
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..7466
                     /gene="PDS5B"
                     /gene_synonym="APRIN; AS3; CG008"
                     /note="PDS5 cohesin associated factor B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 60 ESTs, 3848 long SRA reads, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 157 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23047"
                     /db_xref="HGNC:HGNC:20418"
                     /db_xref="MIM:605333"
     CDS             162..4499
                     /gene="PDS5B"
                     /gene_synonym="APRIN; AS3; CG008"
                     /codon_start=1
                     /product="sister chromatid cohesion protein PDS5 homolog B
                     isoform X3"
                     /protein_id="XP_011533302.1"
                     /db_xref="GeneID:23047"
                     /db_xref="HGNC:HGNC:20418"
                     /db_xref="MIM:605333"
                     /translation="MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMD
                     MDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDK
                     LKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT
                     LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLA
                     KALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQ
                     LEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECV
                     KFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNF
                     VRERTLDKRWRVRKEAMMGLAQIYKKYALQSAAGKDAAKQIAWIKDKLLHIYYQNSID
                     DRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKD
                     LLDLIKQPKTDASVKAIFSKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEVL
                     VSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQ
                     VNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDE
                     KVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSK
                     ETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLL
                     MNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTT
                     ILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDE
                     CYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREY
                     LKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMA
                     KNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESP
                     KDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQ
                     TKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDS
                     DLSELEKPRGRKKTPVTEQEEKLGMDDLTKLVQEQKPKGSQRSRKRGHTASESDEQQW
                     PEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPP
                     APEEEEEEERQSGNTEQKSKSKQHRVSRRAQQRAESPESSAIESTQSTPQKGRGRPSK
                     TPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVR
                     RRSAKRERR"
ORIGIN      
        1 gccattttga agcggagagg aggaggaacg gcagggctgg ctgcggaagg ggaggggggg
       61 ggagaaggcg attggatgcg gcggcggcgg cggatcccgg agagccccgg agtgagcgga
      121 gtagcgagtc ggcaacccgg aggggtagaa atatttctgt catggctcat tcaaagacta
      181 ggaccaatga tggaaaaatt acatatccgc ctggggtcaa ggaaatatca gataaaatat
      241 ctaaagagga gatggtgaga cgattaaaga tggttgtgaa aacttttatg gatatggacc
      301 aggactctga agaagaaaag gagctttatt taaacctagc tttacatctt gcttcagatt
      361 tttttctcaa gcatcctgat aaagatgttc gcttactggt agcctgctgc cttgctgata
      421 ttttcaggat ttatgctcct gaagctcctt acacatcccc tgataaacta aaggatatat
      481 ttatgtttat aacaagacag ttgaaggggc tagaggatac aaagagccca caattcaata
      541 ggtattttta tttacttgag aacattgctt gggtcaagtc atataacata tgctttgagt
      601 tagaagatag caatgaaatt ttcacccagc tatacagaac cttattttca gttataaaca
      661 atggccacaa tcagaaagtc catatgcaca tggtagacct tatgagctct attatttgtg
      721 aaggtgatac agtgtctcag gagcttttgg atacggtttt agtaaatctg gtacctgctc
      781 ataagaattt aaacaagcaa gcatatgatt tggcaaaggc tttactgaag aggacagctc
      841 aagctattga gccatatatt accaattttt ttaatcaggt tctgatgctt gggaaaacat
      901 ctatcagcga tttgtcagag catgtctttg acttaatttt ggagctctac aatattgata
      961 gtcatttgct gctctctgtt ttaccccagc ttgaatttaa attaaagagc aatgataatg
     1021 aggagcgcct acaagttgtt aaactactgg caaaaatgtt tggggcaaag gattcagaat
     1081 tggcttctca aaacaagcca ctttggcagt gctacttggg caggtttaat gatatccatg
     1141 taccaatccg cctggaatgt gtgaaatttg ctagccattg tctcatgaac catcctgatt
     1201 tagcaaaaga cttaacagag tatcttaaag tgaggtcaca tgaccctgag gaagctatta
     1261 gacatgatgt tattgtgtca atagttacag ctgctaaaaa ggatattctt ctggtcaatg
     1321 atcacttact taattttgtg agagagagaa cattagacaa acgatggaga gtacgcaaag
     1381 aagccatgat gggacttgcc caaatttata agaaatatgc tttacagtca gcagctggaa
     1441 aagatgctgc aaaacagata gcatggatca aagacaaatt gctacatata tattatcaaa
     1501 atagtattga tgatcgacta cttgttgaac ggatctttgc tcaatacatg gttcctcaca
     1561 atttagaaac tacagaacgg atgaaatgct tatattactt gtatgccaca ctggatttaa
     1621 atgctgtgaa agcattgaat gaaatgtgga aatgtcaaaa tctgctccga catcaagtaa
     1681 aggatttgct tgacttgatt aagcaaccca aaacagatgc cagtgtcaag gccatatttt
     1741 caaaagtgat ggttattaca agaaatttac ctgatcctgg taaggctcag gatttcatga
     1801 agaaattcac acaggtgtta gaagatgatg agaaaataag aaagcagtta gaagtacttg
     1861 ttagtccaac atgctcctgc aagcaggctg aaggttgtgt gcgtgaaata actaagaagt
     1921 tgggcaaccc caaacagcct acaaatcctt tcctggaaat gatcaagttt ctcttggaga
     1981 ggatagcacc tgtgcacata gataccgaat ctatcagtgc tcttattaaa caagtgaaca
     2041 aatcaataga tggaacagca gatgatgaag atgagggtgt tccaactgat caagccatca
     2101 gagcaggtct tgaactgctt aaggtactct catttacaca tcccatctca tttcattctg
     2161 ctgaaacatt tgaatcatta ctggcttgtc tgaaaatgga tgatgaaaaa gtagcagaag
     2221 ctgcactaca aattttcaaa aacacaggaa gcaaaattga agaggatttt ccacacatca
     2281 gatcagcctt gcttcctgtt ttacatcaca aatctaaaaa aggacccccc cgtcaagcca
     2341 aatatgccat tcattgtatc catgcgatat tttctagtaa agagacccag tttgcacaga
     2401 tatttgagcc tctgcataag agcctagatc caagcaacct ggaacatctc ataacaccat
     2461 tggttactat tggtcatatt gctctccttg cacctgatca atttgctgct cctttgaaat
     2521 ctttggtagc tactttcatt gtgaaagatc ttctcatgaa tgatcggctt ccagggaaaa
     2581 agacaactaa actttgggtt ccagatgaag aagtatctcc tgagacaatg gtcaaaattc
     2641 aggctattaa aatgatggtt cgatggctac ttggaatgaa aaataatcac agtaaatcag
     2701 gaacttctac cttaagattg ctaacaacaa tattgcatag tgatggagac ttgacagaac
     2761 aggggaaaat tagtaaacca gatatgtcac gtctgagact tgctgctggg agtgctattg
     2821 tgaagctggc acaagaaccc tgttaccatg aaatcatcac attagaacaa tatcagctat
     2881 gtgcattagc tatcaacgat gaatgctatc aagtaagaca agtgtttgcc cagaaacttc
     2941 acaaaggcct ttcccgttta cggcttccac ttgagtatat ggcaatctgt gccctttgtg
     3001 caaaagatcc tgtaaaggag agaagagctc atgctaggca atgtttggtg aaaaatataa
     3061 atgtaaggcg ggagtatctg aagcagcatg cagctgttag tgaaaaatta ttgtctcttc
     3121 taccagagta tgttgttcca tatacaattc accttttggc acatgaccca gattatgtca
     3181 aagtacagga tattgaacaa cttaaagatg ttaaagaatg tctttggttt gttctggaaa
     3241 tattaatggc taaaaatgaa aataacagtc acgcttttat cagaaagatg gtagaaaata
     3301 ttaaacaaac aaaagatgcc caaggaccag atgatgcaaa aatgaatgaa aaactgtaca
     3361 ctgtgtgtga tgttgccatg aatatcatca tgtcaaagag tactacatac agtttggaat
     3421 ctcctaaaga cccggtacta ccagctcgtt tcttcactca acctgacaag aatttcagta
     3481 acaccaaaaa ttatctgcct cctgaaatga aatcattttt cactcctgga aaacctaaaa
     3541 caaccaatgt tctaggagct gttaacaagc cactttcatc agcaggcaag caatctcaga
     3601 ccaaatcatc acgaatggaa actgtaagca atgcaagcag cagctcaaat ccaagctctc
     3661 ctggaagaat aaaggggagg cttgatagtt ctgaaatgga tcacagtgaa aatgaagatt
     3721 acacaatgtc ttcacctttg ccggggaaaa aaagtgacaa gagagacgac tctgatcttt
     3781 ctgaattgga gaagcctaga ggcaggaaaa aaacgcccgt cacagaacag gaggagaaat
     3841 taggtatgga tgacttgact aagttggtac aggaacagaa acctaaaggc agtcagcgaa
     3901 gtcggaaaag aggccatacg gcttcagaat ctgatgaaca gcagtggcct gaggaaaaga
     3961 ggctcaaaga agatatatta gaaaatgaag atgaacagaa tagtccgcca aaaaagggta
     4021 aaagaggccg accaccaaaa cctcttggtg gaggtacacc aaaagaagag ccaacaatga
     4081 aaacttctaa aaaaggaagc aaaaaaaaat ctggacctcc agcaccagag gaggaggaag
     4141 aagaagaaag acaaagtgga aatacggaac agaagtccaa aagcaaacag caccgagtgt
     4201 caaggagagc acagcagaga gcagaatctc ctgaatctag tgcaattgaa tccacacagt
     4261 ccacaccaca gaaaggacga ggaagaccat caaaaacgcc atcaccatca caaccaaaaa
     4321 aaaatgtccg tgtaggacgc tccaaacaag cagctactaa ggaaaatgat tcaagtgaag
     4381 aagtagatgt gtttcagggt agctctcctg tcgatgatat tccacaggaa gaaacagagg
     4441 aggaggaagt ttctacagta aatgtacggc ggcgaagtgc taaaagggaa cggcgatgaa
     4501 caaatgtaat taataacttt ctctgtgaaa gctttggaaa aatctttttt tttttttttg
     4561 gtcaagcttg aggctgaata aagcctttga tgcacaaaat gggactgctg aagagtggac
     4621 agttggacct tactttggtg accccataca tttgtggtca catgctttag ccatacacat
     4681 ggtaacattg actatggagt cttgtgaaag tgtaatgtgc gatggctatg tagacataaa
     4741 gaagaaactt gtaaatatct tttttctttt ttttaatgtt tctgatttct gaagtgcttg
     4801 tatagctttt atctgcggct ttaaactgac agtacccgac tgtttattgg atctattgat
     4861 ttgaaaagaa tttgttagga tagatcttaa gcagtaatct gtcagtgttt gtatttgtat
     4921 tctctgcaat tttactgtga aaaaaaattt gttttcaaca attggtgtca ttttcttgat
     4981 gtcactattt gttggagagt taaatggtct cttccctttg tgtatcttac ctagtgttta
     5041 ctcctgggca cccttaatct tcagaggtgc taaattgtct gccattacac cagaaggatg
     5101 cctctgatag gaggacaacc atgcaaattg tgaaatagtc ctgaagttct tggattactt
     5161 tacacctcag tattgatttg tcccagaatt ttctggcctt tcatggcaat gaaaatttta
     5221 agaagaaaga tttaaagtat tttaatttta aagagtgtgt tataaaataa tgtactgaat
     5281 tctttatccc attttatcat cctttcagtt tttattaatc tactgtatca ataaaattct
     5341 gtaatttgaa tgagttttta atagtctaga atgttattgt gtatagatat ttcctcttga
     5401 acgttatgtt cagaaaatgc aaattacact ataatataaa acctgatata tacacattag
     5461 aaatattcca gttctccgta acagtgtaaa gttaatcaga aagaaaaaat tttattgatg
     5521 cagtgtgtct ttataaagct gttcttgaaa gccaagtgtt ttgtatttta tagtgagttg
     5581 catgtttttg aaaaaaagtg ctgaaaatgg gatgtgctgt tttctgtaaa ttcatattta
     5641 gccatagtat atgatagatt gccccataac atagtttttc atcaagagtt tattattgta
     5701 ctttattttg gagccaaaaa attgattctg gggggtgggg gcagcgtaga agtggtatat
     5761 ccaagtatat cagctactgt agttgtcaca gtcttgtgaa ctttgaatga aattccactt
     5821 tgtccagatt gggagaagtg gaaatttatt tggatttaga gcaggtcttt ttttttcttc
     5881 attgtaatct gcaaaatgta gaaataaatt acttaaggca gtatccttta tacagttgta
     5941 taaactgtat tttgaaccaa aacatatagg ttactactta atgcttacct aatttcattt
     6001 tagtatttta ggtgctgtta tgttttttca tggttaacac cagaggggaa aaaatcatat
     6061 tctaacttat taaatttatc acattgaata gtggaacatt ttcatatgat acaccattat
     6121 gtttaagata tatttccaag attggttata atagatgggg catataataa agaagctact
     6181 attttggaaa atgacatttt actatttgcc aatgtatatt gcaattgatg tgattatttt
     6241 tcttttaaag atttgtttgt gtttatgaaa cagccattta ttttttaaaa agtgttttga
     6301 attgtgtctt aatctctcca tattcaacta ttcttcattt acaacaatag tgacaccagt
     6361 aattatgaga ggctgtcata tatcaaagca gctcaggtgg gatcaacata cattggtttt
     6421 gaaatgtttc cttagctcgg ttctcccaaa cacataattt ctgtttcagc agtacaaagg
     6481 catgttttaa aatctataac ataaagaata aggaatagct ttgtattttt gtcattgatt
     6541 aaattgcacc agaaatgttt atggaaatat taagaacatt ttataaaaca tacgaaaaag
     6601 tgattgtgaa ggatttttat ttgcatgatt atagttaagc aaatttcatt tcacattttt
     6661 gtaatgctgt acagcagttc acaaaaaaat gttcattgta gattttgtta tgttcaatgc
     6721 caatgagtct gtaattttac gacctgtctg ttcttttttt gggtggatta cgatgtaaat
     6781 ttttcttttc tttctttctt tttttttttt tttgtgtaga aaaataggtg caataatgat
     6841 caaagttttg atgtcttgag tctccatctt aggggattat cttacgttta agcttaacat
     6901 ttcatgtagt aagatttgga gagccacata ctttacagta aaattaagtg tgtataaaac
     6961 attaattgct aacaattgtt agcaaactat ttcagtgata atgttcattt tgaaaatatg
     7021 tactgtataa cattaagaaa atatttaact ccctgtaaca agttccatta tgaaaatctt
     7081 attcctcagt gaggttatct tgctgcactc tgtagcaaat ttgtttaatc tacattataa
     7141 taaaatttct tgctgcagtg caacaggagg ctttttcagt gatcttcact gtatatgtaa
     7201 attacaaatg tggctgtaaa acttattcca ggtattaaag gttaaattgc tttctatatc
     7261 ttcttataac ttgtaagtct gatttttaag atttcctttt gtccacttgt aagaatgtca
     7321 ggaatttaag aatttgttta aattaggcat atctctgcca tcacatagta ttatgtcacc
     7381 ataatgaaca attgctattt aaatagataa ccaattttca gacacatttt tggatttctg
     7441 tgaagttgaa taaacataaa agctaa
//
