LOCUS       XM_011533252            6167 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens programmed cell death 6 interacting protein
            (PDCD6IP), transcript variant X1, mRNA.
ACCESSION   XM_011533252
VERSION     XM_011533252.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011533252.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6167
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..6167
                     /gene="PDCD6IP"
                     /gene_synonym="AIP1; ALIX; DRIP4; HP95; MCPH29"
                     /note="programmed cell death 6 interacting protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 103 ESTs, 2302 long SRA reads, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 7 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:10015"
                     /db_xref="HGNC:HGNC:8766"
                     /db_xref="MIM:608074"
     CDS             938..2989
                     /gene="PDCD6IP"
                     /gene_synonym="AIP1; ALIX; DRIP4; HP95; MCPH29"
                     /codon_start=1
                     /product="programmed cell death 6-interacting protein
                     isoform X1"
                     /protein_id="XP_011531554.1"
                     /db_xref="GeneID:10015"
                     /db_xref="HGNC:HGNC:8766"
                     /db_xref="MIM:608074"
                     /translation="MLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYK
                     DTLPKYFYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTV
                     ASRYDEYVNVKDFSDKINRALAAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNV
                     PISQKFTDLFEKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPA
                     AIEDVSGDTVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEE
                     EATDNDLRAKFKERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDT
                     IVLLCKPEPELNAAIPSANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVN
                     FDMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQE
                     FSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSD
                     IVFARKTERDELLKDLQQSIAREPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTK
                     PQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGPPYPTYPGY
                     PGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQ
                     Q"
ORIGIN      
        1 ggttgtctgc cagccgtcgc tcgccgctcc tcttcccgtc tccccccttc cttcaatcct
       61 gtaacctggg cggagccgcc ccgtcccggc ctgaccaggc gcgtaggtgt ggtctgcatt
      121 ctttgctggt gagcaggacc cgccctgcag gcccgctgtg actgcccgct tgtcctgcct
      181 gcacgtctgc tctagccctt ggtcggcgag ggctccgtgg atcagatacc tgggagcagc
      241 agtctgccct gtactgatct cttttgccac atttacttag aactagtctt cacttttttg
      301 ggtctctaac tgaagcttcc cctttcgccc catttttcca tcactgtctt tcttgggcca
      361 cattttgatt tcataatagt agttgcttga aggcagtggg ggaagtgggg gaattgggac
      421 actggaccaa atgtctgatc agctcatcac attgtccaca tgaaatggac cgtcttcctc
      481 agttcaaaat aatcaaatga tagatggaga attctgaaag ttaggagcta caactatttg
      541 aaataaaact ctagttacat agttgaaccg ttcaagatat tatgatcaga tttgttctat
      601 tgaacccaaa ttcccatttt ctgaaaatca gatctgcttg acatttacct ggaaggatgc
      661 tttcgataaa ggttcacttt ttggaggctc tgtaaaactg gctcttgcaa gcttaggata
      721 tgaaaagagc tgtgtgttgt tcaattgtgc agccttagct agccaaattg cagcagaaca
      781 gaacctggat aatgatgaag gattgaaaat cgctgctaaa cattaccagt ttgctagtgg
      841 tgccttttta catattaaag agacggtttt atctgcctta agtcgagagc cgaccgtgga
      901 catatctcca gatactgttg ggaccctcag tcttattatg ctggcacagg ctcaagaagt
      961 atttttttta aaagccacaa gagataaaat gaaagatgcc atcatagcta aattggctaa
     1021 tcaggctgca gattattttg gtgatgcttt caaacagtgt caatacaaag atactctccc
     1081 caagtatttt tatttccagg aggtgttccc tgtcttggct gcaaagcact gtatcatgca
     1141 ggccaatgct gagtaccatc agtctatcct ggcaaaacag cagaagaaat ttggagaaga
     1201 aattgcaagg ttacagcatg cagcagaact gattaaaaca gtggcatctc gctatgatga
     1261 atatgttaat gtgaaggatt tttctgacaa aatcaatcgt gcccttgctg cagcaaagaa
     1321 ggataatgac ttcatttatc atgatcgagt tccagacctt aaagatctag atcctattgg
     1381 caaagccaca cttgtgaaat ctaccccggt caatgtaccc atcagtcaga aatttactga
     1441 tctgtttgag aagatggttc ccgtgtcagt acagcagtct ttggctgcct ataatcagag
     1501 gaaagccgat ttggttaaca gatcaattgc tcagatgaga gaagccacca ctttggcaaa
     1561 tggggtgcta gcttccctta atcttccagc agcaattgaa gatgtgtctg gagacactgt
     1621 acctcagtct atattgacta aatccagatc tgtgattgaa cagggaggca tccagactgt
     1681 tgatcagttg attaaagaac tgcctgaatt actgcaacga aatagagaaa tcctagatga
     1741 gtcattaagg ttgttggatg aagaagaagc aaccgataat gatttaagag caaaatttaa
     1801 ggaacgttgg caaaggacac catccaatga actgtataag cctttaagag cagagggaac
     1861 caacttcaga acagttttag ataaagctgt gcaggcagat ggacaagtga aagaatgtta
     1921 ccagtctcat cgtgacacca tcgtgctttt gtgtaagcca gagcctgagc tgaatgctgc
     1981 catcccttct gctaatccag caaagaccat gcagggcagt gaggttgtaa atgtcttaaa
     2041 atccttattg tcaaatcttg atgaagtaaa gaaggaaaga gagggtctgg agaatgactt
     2101 gaaatctgtg aattttgaca tgacaagcaa gtttttgaca gccctggctc aagatggtgt
     2161 gataaatgaa gaagctcttt ctgttactga actagatcga gtctatggag gtcttacaac
     2221 taaagtccaa gaatctctaa agaaacagga gggacttctt aaaaatattc aggtctcaca
     2281 tcaggaattt tcaaaaatga aacaatctaa taatgaagct aacttaagag aagaagtttt
     2341 gaagaattta gctactgcat atgacaactt tgttgaactt gtagctaatt tgaaggaagg
     2401 cacaaagttt tacaatgagt tgactgaaat cctggtcagg ttccagaaca aatgcagtga
     2461 tatagttttt gcacggaaga cagaaagaga tgaactctta aaggacttgc aacaaagcat
     2521 tgccagagaa cctagtgctc cttcaattcc tacacctgcg tatcagtcct caccagcagg
     2581 aggacatgca ccaactcctc caactccagc gccaagaacc atgccgccta ctaagcccca
     2641 gcccccagcc aggcctccac cacctgtgct tccagcaaat cgagctcctt ctgctactgc
     2701 tccatctcca gtgggggctg ggactgctgc gccagctcca tcacaaacgc ctggctcagc
     2761 tcctcctcca caggcgcagg gaccacccta tcccacctat ccaggatatc ctgggtattg
     2821 ccaaatgccc atgcccatgg gctataatcc ttatgcgtat ggccagtata atatgccata
     2881 tccaccagtg tatcaccaga gtcctggaca ggctccatac ccgggacccc agcagccttc
     2941 ataccccttc cctcagcccc cacagcagtc ttactatcca cagcagtaat atgtctgctc
     3001 agcagctcag ctgattcaga tcagagggaa agaaatacca accctgcaat aagtgtacta
     3061 aactctacgc tctggttaat gtaatgtact ctcctggact gaatgcagtg tataatttct
     3121 gtctacagct agaagctgtg ccccagttcc acatttgatt acacatgtga gatttgctgc
     3181 tgttgcagta taaacactag gtataatagg atttgaaatt gcattacagt tcataaaaat
     3241 tgaaaatgag aaattaaacc tgcaagtgaa acatttgaaa cgattatact ttctacataa
     3301 gacatggttg ggacatcaga tacttacaaa gatggtttaa gtatggatac tagagaaaat
     3361 taagttttct ttctctttgg tttattgatt tggtttaatt tccattatgc tattttgcat
     3421 aatcaaggca ctgtaaatct tataatttta aaataaatta cttaagaaca gttgtcattg
     3481 ttatgttttg ttattgattc tcattactgt ctaatttttt ttctggtatt agtctcattt
     3541 tgtatgtata taagttaaac agatactgtt tttaagtgca tgaatagtac aagttattat
     3601 caaggatgtt ttacagggaa atcaaaagaa tattatcata ctttatcttt cgtatgctga
     3661 ttagtaaacg atttttgaca tttattttag aaagtcctat aatgtggaag aaacaaacag
     3721 ttgctaccaa agattcttca aataaacata caaataaatg tgtatattta atgttttatt
     3781 gttagcttct ccagaaaatt gatgcaaatt ctggtaataa ttcttgcatt ttttccccat
     3841 aacctggtta aaataaatac gccattggca atacttcata atgtaatgga attgtttggg
     3901 gaacacttac tgtaccctct catccttttt ccaccttact gtgttaactt agtgacattt
     3961 aatgcccaat atgtatgaat agatctaagc catttaattt tttttcctta aagattggag
     4021 tattttataa ttcaaggagc atacaaaaca atggttggga acatatgcca attatggaat
     4081 aggctatgta tttaatatta atctctgcca ttaggatatc tactcactgt ataaacctca
     4141 gtaaaaatag tgaagacatg catcatggaa tgagaaaatg agaaaggaat gagttgtcta
     4201 acatcacagt gggatctgtt ttttgtgagg ttcatttctg aacacattag gcatatgagc
     4261 agatttccag tgaatctatt tatgtttatt ttctgagttt caacgctgac cttttcttgc
     4321 attattgttt cattttaatg atagtgttac ttgtcccact gttgttttca ttgagtttgg
     4381 atttatattt taaatgttcg aatgaaagta tgattgtaaa agggagtgaa ttggtttaaa
     4441 aatatatgta tattttaaac tttgttgtgt gtaggaaaca tgaaggcatg ttaattcaat
     4501 ataaatgacc tttgatttca tggaatatta aagttggttt aaagtccaat agttaaacct
     4561 tagcaaaaat agctttttac ttcatcagtt gctaagattt aatactttgg attcatcaaa
     4621 gtgtgacatg ggcttgtttg acttctgtaa gtggcattta agttccacat tcttattact
     4681 tgaggtactt tatactaaca taagacagtg agagttagag gtattacaag ttgctagttt
     4741 ataatgtctt actaatgcag aaacaaggaa aaaagcaaaa ttggcctgaa tattctcttg
     4801 gggaaagagg gcaccaaaga aaagggtaag tgcatctgag ggccaaaaga gatgtataag
     4861 ccttttagcc cattccccat gctgggcctg ctcacagagc cacaggaaga tcattcagaa
     4921 actaggaaag gaggccccca cagctgatcc tgccacagca cacctgactc actcggctct
     4981 gttagtgtaa ccttttaaat gtagcaacac aaaccctttc cctcttgtca gttcactcat
     5041 cctttggttt ctttttaatc acctgtgtct gggcacagac aatcacaata aatgcagccc
     5101 tttattactg ttaaggatca tactgttggt ttggagttgg aagggtacta ctctgtgatt
     5161 caggtgtgtt gtacccatat ttataattag gctttattat cttcctaaat caaggaaagg
     5221 aaatcatccc cagaccattt atgctgagct ttggaatact attttaaact ggattgtact
     5281 taaataatga agctctgcat agaggaacta gtcagaagtg gggaaaacac tgtctaattt
     5341 ttatcagtct ggtataaagt attgatctaa gagaactctc cctgtgcccc ttggtcttta
     5401 ttctcaatta agaaaaacag tcacatgtca cgacaaacca atcaatcttt atgagatatt
     5461 cctgtatcca taccccagct tgtttgcaat ttataaacct ccccttcaaa actaaggagt
     5521 tgcagaaaaa aatggatttc acagagcctt gtgtccctaa agttctgtcc cagtcagcag
     5581 tctttatagt ccaaacagat tataaaaaat gttttccatt tgaactttac agtttgcaaa
     5641 agtgctttta tacattttct aatttcagaa acaggataat ttgttaagtg ggtttcagtt
     5701 tgctaatagg gattttttgt gttttgtttt ttaattttca gcatctcttg aagaatcttg
     5761 ctacagccaa atggcatctc actttttaaa gacgtttgca attattagtt gattcacagt
     5821 acagaacaag gtataaagga aaaaaccctg ctaggtagtg ttataattgc tagattaaaa
     5881 atagactaga acaggttcat tttaagattt acttggaaga gcaaagaagg aaaaattata
     5941 tttttaaaga aagagaatat tcaggcttta tttctggtat gaagtttata ttttttaaaa
     6001 aaatcctata ttatcacacc agagatttta gattcttttc tggttagaaa cattgctggt
     6061 agttggatta tatttttatt gtattcattt atcttagggg gaacattgta aagaaacaaa
     6121 aaggtccaga tgaatgtatg ctagaaataa aagttgaaag attctta
//
