LOCUS       XM_005251600            2436 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens programmed cell death 1 ligand 2
            (PDCD1LG2), transcript variant X1, mRNA.
ACCESSION   XM_005251600
VERSION     XM_005251600.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005251600.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..2436
                     /gene="PDCD1LG2"
                     /gene_synonym="B7DC; bA574F11.2; Btdc; CD273; PD-L2;
                     PDCD1L2; PDL2"
                     /note="programmed cell death 1 ligand 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 9 ESTs, 125 long SRA reads, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 77 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:80380"
                     /db_xref="HGNC:HGNC:18731"
                     /db_xref="MIM:605723"
     CDS             288..1139
                     /gene="PDCD1LG2"
                     /gene_synonym="B7DC; bA574F11.2; Btdc; CD273; PD-L2;
                     PDCD1L2; PDL2"
                     /codon_start=1
                     /product="programmed cell death 1 ligand 2 isoform X1"
                     /protein_id="XP_005251657.1"
                     /db_xref="GeneID:80380"
                     /db_xref="HGNC:HGNC:18731"
                     /db_xref="MIM:605723"
                     /translation="MIFLLLMLSLELQLHQIAALFTVTVPKELYIIEHGSNVTLECNF
                     DTGSHVNLGAITASLQKVENDTSPHRERATLLEEQLPLGKASFHIPQVQVRDEGQYQC
                     IIIYGVAWDYKYLTLKVKASYRKINTHILKVPETDEVELTCQATGYPLAEVSWPNVSV
                     PANTSHSRTPEGLYQVTSVLRLKPPPGRNFSCVFWNTHVRELTLASIDLQSQMEPRTH
                     PTWLLHIFIPFCIIAFIFIATVIALRKQLCQKLYSSKDTTKRPVTTTKREVNSAVNLN
                     LWSWEPG"
ORIGIN      
        1 actctcatgt tacggcaaac cttaagctga atgaacaact tttcttctct tgaatatatc
       61 ttaacgccaa attttgagtg cttttttgtt acccatcctc atatgtccca gctagaaaga
      121 atcctgggtt ggagctactg catgttgatt gttttgtttt tccttttggc tgttcatttt
      181 ggtggctact ataaggaaat ctaacacaaa cagcaactgt tttttgttgt ttacttttgc
      241 atctttactt gtggagctgt ggcaagtcct catatcaaat acagaacatg atcttcctcc
      301 tgctaatgtt gagcctggaa ttgcagcttc accagatagc agctttattc acagtgacag
      361 tccctaagga actgtacata atagagcatg gcagcaatgt gaccctggaa tgcaactttg
      421 acactggaag tcatgtgaac cttggagcaa taacagccag tttgcaaaag gtggaaaatg
      481 atacatcccc acaccgtgaa agagccactt tgctggagga gcagctgccc ctagggaagg
      541 cctcgttcca catacctcaa gtccaagtga gggacgaagg acagtaccaa tgcataatca
      601 tctatggggt cgcctgggac tacaagtacc tgactctgaa agtcaaagct tcctacagga
      661 aaataaacac tcacatccta aaggttccag aaacagatga ggtagagctc acctgccagg
      721 ctacaggtta tcctctggca gaagtatcct ggccaaacgt cagcgttcct gccaacacca
      781 gccactccag gacccctgaa ggcctctacc aggtcaccag tgttctgcgc ctaaagccac
      841 cccctggcag aaacttcagc tgtgtgttct ggaatactca cgtgagggaa cttactttgg
      901 ccagcattga ccttcaaagt cagatggaac ccaggaccca tccaacttgg ctgcttcaca
      961 ttttcatccc cttctgcatc attgctttca ttttcatagc cacagtgata gccctaagaa
     1021 aacaactctg tcaaaagctg tattcttcaa aagacacaac aaaaagacct gtcaccacaa
     1081 caaagaggga agtgaacagt gctgtgaatc tgaacctgtg gtcttgggag ccagggtgac
     1141 ctgatatgac atctaaagaa gcttctggac tctgaacaag aattcggtgg cctgcagagc
     1201 ttgccatttg cacttttcaa atgcctttgg atgacccagc actttaatct gaaacctgca
     1261 acaagactag ccaacacctg gccatgaaac ttgccccttc actgatctgg actcacctct
     1321 ggagcctatg gctttaagca agcactactg cactttacag aattacccca ctggatcctg
     1381 gacccacaga attccttcag gatccttctt gctgccagac tgaaagcaaa aggaattatt
     1441 tcccctcaag ttttctaagt gatttccaaa agcagaggtg tgtggaaatt tccagtaaca
     1501 gaaacagatg ggttgccaat agagttattt tttatctata gcttcctctg ggtactagaa
     1561 gaggctattg agactatgag ctcacagaca gggcttcgca caaactcaaa tcataattga
     1621 catgttttat ggattactgg aatcttgata gcataatgaa gttgttctaa ttaacagaga
     1681 gcatttaaat atacactaag tgcacaaatt gtggagtaaa gtcatcaagc tctgtttttg
     1741 aggtctaagt cacaaagcat ttgttttaac ctgtaatggc accatgttta atggtggttt
     1801 tttttttgaa ctacatcttt cctttaaaaa ttattggttt ctttttattt gtttttacct
     1861 tagaaatcaa ttatatacag tcaaaaatat ttgatatgct catacgttgt atctgcagca
     1921 atttcagata agtagctaaa atggccaaag ccccaaacta agcctccttt tctggccctc
     1981 aatatgactt taaatttgac ttttcagtgc ctcagtttgc acatctgtaa tacagcaatg
     2041 ctaagtagtc aaggcctttg ataattggca ctatggaaat cctgcaagat cccactacat
     2101 atgtgtggag cagaagggta actcggctac agtaacagct taattttgtt aaatttgttc
     2161 tttatactgg agccatgaag ctcagagcat tagctgaccc ttgaactatt caaatgggca
     2221 cattagctag tataacagac ttacataggt gggcctaaag caagctcctt aactgagcaa
     2281 aatttggggc ttatgagaat gaaagggtgt gaaattgact aacagacaaa tcatacatct
     2341 cagtttctca attctcatgt aaatcagaga atgcctttaa agaataaaac tcaattgtta
     2401 ttcttcaacg ttctttatat attctacttt tgggta
//
