LOCUS       XM_017021112            6280 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens phosphofurin acidic cluster sorting protein
            2 (PACS2), transcript variant X12, mRNA.
ACCESSION   XM_017021112
VERSION     XM_017021112.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000014.9) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017021112.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6280
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="14"
     gene            1..6280
                     /gene="PACS2"
                     /gene_synonym="DEE66; EIEE66; PACS-2; PACS1L"
                     /note="phosphofurin acidic cluster sorting protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 32 ESTs, 915 long SRA reads, 1 Protein, and
                     97% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:23241"
                     /db_xref="HGNC:HGNC:23794"
                     /db_xref="MIM:610423"
     CDS             289..2805
                     /gene="PACS2"
                     /gene_synonym="DEE66; EIEE66; PACS-2; PACS1L"
                     /codon_start=1
                     /product="phosphofurin acidic cluster sorting protein 2
                     isoform X12"
                     /protein_id="XP_016876601.1"
                     /db_xref="GeneID:23241"
                     /db_xref="HGNC:HGNC:23794"
                     /db_xref="MIM:610423"
                     /translation="MQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKL
                     QIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEI
                     WIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDF
                     DVGKPKKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEED
                     LDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARS
                     HKEPPSPADVPEKTRSLGGRQPSDSVSDTVALQGVPGPREHPGQPEDSPEAEASTLDV
                     FTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNER
                     CPDARSQLQVQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHT
                     LPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQ
                     LSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQ
                     DTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKRKKHFHFDFTLSPDEESSQKFIPF
                     VGVVKVGIVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGL
                     SSPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSS
                     GEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNML
                     RVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF"
ORIGIN      
        1 gcagattcgc cgcgcgcgcc cgggccgcgc cgcccgcaac ggccgcgccc gcgggatggg
       61 acaggcaccg ggaccacggc ggggacgcga ggactggagc cgcgacctcc ccactgcgag
      121 cgagctggcc tcccttgcgg cgcgccggcg tcggaggggc gacctgcggg ggctgggctt
      181 cggcggaacc cgagcggggc ctaccggttg tgcagcctga ctctgaagaa gctggtggtc
      241 ttcaaggagc tggagaagga gctgatctcc gtggtgatcg ctgtcaagat gcagggctcc
      301 aaacgaatcc tgcggtccca tgagattgtg ctgcccccca gtggacaagt ggagacagac
      361 ctggccctga ccttctcctt gcagtatcct cacttcttga agagggaagg caacaagctt
      421 cagatcatgc tgcagcgcag aaagcgctac aagaacagaa ccatcctggg ctacaagacg
      481 ctggccgcgg gctccatcag catggctgag gtgatgcaac acccgtctga aggtggccag
      541 gtgctgagcc tctgcagcag catcaaggag gcccccgtca aggcggccga gatctggatc
      601 gcctccctgt ccagccagcc cattgaccac gaagacagca ccatgcaggc cggccccaag
      661 gccaagtcca cggataacta ctccgaggag gagtatgaga gcttctcctc cgagcaggag
      721 gccagtgacg acgccgtgca ggggcaggac ttggacgagg acgactttga cgtggggaag
      781 ccgaagaagc agcggagatc gattgtaaga acgacgtcca tgaccaggca acagaacttc
      841 aagcagaaag tggtagcgct gctgcggagg ttcaaagtgt ccgacgaggt cctggactcg
      901 gagcaggacc ctgcggagca catccccgag gcagaggagg acctggacct cctgtatgac
      961 accctggaca tggagcaccc cagcgacagc ggccccgaca tggaggatga cgacagcgtc
     1021 ctcagcaccc ccaagccgaa gctgcggcca tactttgaag gcctgtcgca ctcgagctcg
     1081 cagacggaga ttgggagcat ccacagcgcc cgcagccaca aggagccccc aagcccggct
     1141 gacgtgcccg agaagacgcg gtccctggga ggcaggcagc cgagcgacag tgtctctgac
     1201 acggtggccc tccagggtgt gccaggcccg agggagcacc ctggacagcc tgaggacagc
     1261 cccgaggctg aggcctccac cctggatgtg ttcacggaga ggctgccgcc cagcgggagg
     1321 atcaccaaga cagagtccct tgtcatcccc tccaccaggt ccgaggggaa gcaggctggc
     1381 cgacggggcc ggagcacatc cttgaaggag cggcaggcag cacggcccca gaatgagcgg
     1441 gccaacagcc tggacaacga gcgctgcccg gacgcccgga gccagctaca ggtgcagctg
     1501 cagatcccca ggaagactgt gtatgaccag ctcaaccaca tcctcatctc cgatgaccag
     1561 cttcccgaaa acatcatcct tgtcaacacc tcggactggc aggggcagtt cctctccgac
     1621 gtcctgcaga ggcacacgct ccccgtggtg tgcacgtgct ctcctgcgga cgtccaggcg
     1681 gccttcagca ccatcgtctc acggatacag agatactgca actgcaattc ccagcccccg
     1741 acccccgtga agatcgccgt ggcgggagcg cagcattacc tcagtgccat cctgcggctc
     1801 tttgtggagc agctgtccca caagacaccc gactggctcg gctacatgcg cttcctggtc
     1861 atcccactgg gctcccaccc cgtggccagg tacctaggct ccgtggacta ccgctacaac
     1921 aacttcttcc aggacctggc ctggagagac ctgttcaaca agctggaggc ccagagtgcg
     1981 gtacaggaca cgccagacat tgtgtcacgc atcacgcagt acatcgcagg ggccaactgt
     2041 gcccaccagc tccccatcgc agaggccatg ctgacctaca agcagaagag gaaaaagcat
     2101 tttcattttg actttaccct aagccctgac gaagagtcct cccaaaagtt cattcccttt
     2161 gtcggggttg tgaaggttgg aattgtggag ccatcctcgg ccacatcagg cgactcggac
     2221 gacgcggccc cctcgggctc tggcacgctc tcctccaccc cgccgtccgc atctcctgcg
     2281 gccaaggagg cctcacccac cccgccctcc tccccgtcgg tgagcggagg cctgtcctcc
     2341 cccagccagg gtgtcggcgc cgagctgatg gggctgcagg tggactactg gacggcagca
     2401 cagcctgcgg acaggaagag ggacgccgag aagaaggacc tgcctgtcac caaaaacacg
     2461 ctcaagtgca ctttccggtc cctccaggtc agcaggctgc ccagcagcgg cgaggctgca
     2521 gccacgccca ccatgtccat gaccgtggtc accaaggaga agaacaagaa ggtgatgttt
     2581 ctgcccaaga aagcgaagga caaggacgtg gagtctaaga gccagtgcat tgagggcatc
     2641 agccggctca tctgcactgc caggcagcag cagaacatgc tgcgggtcct catcgacggc
     2701 gtggagtgca gcgacgtcaa gttcttccag ctggccgcgc agtggtcctc gcacgtgaag
     2761 cacttcccca tctgcatctt cggacactcc aaggccacct tctagcccca cccaccaggg
     2821 ggcccacctc ctgccccatg ctgtgagggg cccagctgca tttctgttaa catttcagtt
     2881 tactacagag acagacgctt aaaacacaaa gagaaacagt cttaagtatg aatgtgctca
     2941 caacgtggaa actaacgggg gagctcctgc caggagccga ataactgctc tgcttattaa
     3001 cccgaacgtt cggcccgggg ctgggaagcc agaaggacga tgctgagcca tggatcgcgg
     3061 aaggcgtcct ctggcctcag gagccaccca gagcctcaca ggctgagttc ttgcctctgt
     3121 gtcctgtcct tcctggaagt caggactctg cttcctcagg gagcccgggg aaggcggagc
     3181 tcagtggcca caggccgagg gccatggggc cgctcagtcc cgttggggtt gtcctgagtt
     3241 gagcctgggg gggccgtcct gcccgcctaa gagatgcccc cagcaccgca cactcgtggt
     3301 tcccaataaa ctcctgcctg cggcggaggt tttatagcag cagatatttt taatgctttt
     3361 caatacatgt tctaatgtag ctgccaaaca tgttgctctt ctgaagtccc cctggggctg
     3421 ggcagagcca gcagagcctg cccccacttc cccagcccct gccccacccc gcctcacacc
     3481 ttccccactc tcaggctgtt cttgaaacac catgaggctt ctgcgtgtag tccctgcccc
     3541 aaacttagca agcacagggg cctccacagc ccaggtggcc ccagaaaatg ttccagagcc
     3601 cagcttggta catagtgaga tgctgctggg gttggcctga ggtgggggcc acttcctcca
     3661 ccccagtggg tatgtctgag gtcagccatg gggatatctg ggttgagatt caggttttgg
     3721 tgaatatggg gcaggcgtcc agatgtgttt gtgtcacctg ctgcaacgct gtagccaatg
     3781 aagattccag cgggatggcc tgaccagcgg ggccggcact ttggagccgt gggtgcagcc
     3841 aggtaccccg tgcagggcct gggaggctct ccaggccaca gtcctcagag cgtgttgggt
     3901 cccatgttgt gtgtgggttc catgccctcc acacagcagg agagggcttc cctgaccaca
     3961 cctgccccct cagtcctgct tctccccagt aagcctgcac tgtggggtct ccataggagg
     4021 agctggggaa gctggggccc tcccaggggt cctgatcgac cctgggggct cttggcctgg
     4081 tttcgtaaga tggagcactg caaaaggcca tgctcagaaa gcaaacgcag ggcagggtgg
     4141 gcctcgagcc ggggctggag gggtctccac ccttgctggc ctgagagatg gcccacattt
     4201 cttacttgtg accgccctgc tcttcctggc cgcccccccc aggtggctga acagggtgat
     4261 tttgttgtgg tgaggggcca ggatgtggcc tggtgtgcag cctcagctcc ctgggttcag
     4321 gcctcagagg tagcctgtgt gcaggaggca gagccccagc ccctcccagc cagagcccct
     4381 ccacaccagg gactcctcct tcacctggga ccaggagcct ggggcacacc ccagggtggg
     4441 ggagagggta ggaaggtctc ccattgaatc ctggcttcag gctctgcccc gagaagtgtc
     4501 tgcggtgagg gtgtgagccc cgggctgatg gcctctgacc ccggcaacag gtgggaccct
     4561 gactgactcg ttcagctgcc cccaagctgg gctgcagagc atctgttttt ctgctctcca
     4621 gtttcttttc tttttttttt tttttttttt tgagatggag tcttgctctg ttgcccaggc
     4681 tggagtgcag tggcatgatc tcagctcact gcagcctccg tctcccaggt tcaagcagtt
     4741 ctcctgcctc agcctcccga gtagctggga ttacaggcgt gtgccaccac acctggctat
     4801 tttttttgta tttttagtag agatggggtt ttgccatgtt ggccaggctg gtcttgaact
     4861 cctgacctca agtgatccac ccgcctcggc ctcccaaagt gctgggatta caggcgtgag
     4921 tcaccgcgtc ctgcctgctc ttcctgtttc tttcccaagg gtcacactca gtagggagat
     4981 gaaggtggaa acatccttgc tgtggctttc tggcctcaga gcaggtttta gaggaagggg
     5041 ccacaggctg cctagtgcat cctggctgtg ggcagcccct ttcctggagc cctcctgcct
     5101 accccgtacc tcccatctgg ctgcacagct ccatccttag ccacgcaagg ggagaacatg
     5161 ggcagagtct ccatccagca gctgggggtt ctggtggcac tccctgtgcc cctgctgctg
     5221 ctgggctgtg ggtctgccct gcacccagga gccccacggt ccatccccca caccatgccc
     5281 agcaccaggg aggttgggca gacaagacct gggccatgcc agccctctgt gcctcggttt
     5341 tcccactggt tacacaggat ggtcgcattt tccctgccta cctcacagag ctgttctgag
     5401 ggtgcatgga ggagcactct gtcccaccaa ggacaactag aaaccaaagc catctgacag
     5461 ccagtgcggt aagggcgggg gatgtgtgtg tgaggtgtgc acaccccccg agaacctggc
     5521 cctggactgg cctcacagga caggaggcag ccccttgtag agctagggct cagccccatc
     5581 agtctcaaag gttaagccac cagtcaccac cgaggcaccc ctcaggcctg gtggccactg
     5641 tccactatta cgtagacaga ccccaccctc acccaggcca gctgtgggcc agtcccgccc
     5701 tgcaatctgg tctgctgcct tcctcttcca tgttggtccc cttggccact gtctctgggc
     5761 atgcaagcca gtgtcctggt tcagtgcctc ggccagagct ggggcaggag aggggcctct
     5821 gggtgagagc tgggggtgtc tctgcagggt actggcagcc ttgccacact gtcctcattc
     5881 ccagatggaa agacctgagt gcctctcgcc ttcctccggg aatgaattcc tcatgaaaat
     5941 gaccaggcca cttcttccga gggccaggcc gccccctccc cgagacctgt cctgccgtcc
     6001 gcgggtgtgt ggcctgtagg ggactgagag ctgggcttgc tgggcacctc tggaatctga
     6061 ccctgtgggc caaagaagca ccactgtagt ttctgcagac ccccatgcgg ttcattgtgc
     6121 attgtttggt ttctaggatg tatgtgttgc tagttttttt taatgaaacc ctggattaat
     6181 gtaaatagct ttttggggaa cggattctaa tgtcacgtat gtgaccgtgt ggactatttc
     6241 aaggtgctga tgcaacacta ataaacctgg aggggccggc
//
