LOCUS       NM_001396059            3685 bp    mRNA    linear   PRI 26-OCT-2024
DEFINITION  Homo sapiens olfactory receptor family 5 subfamily D member 3
            pseudogene (OR5D3P), mRNA.
ACCESSION   NM_001396059
VERSION     NM_001396059.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Malnic,B., Godfrey,P.A. and Buck,L.B.
  TITLE     The human olfactory receptor gene family
  JOURNAL   Proc Natl Acad Sci U S A 101 (8), 2584-2589 (2004)
   PUBMED   14983052
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2004 May 4;101(18):7205]
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Fuchs,T., Malecova,B., Linhart,C., Sharan,R., Khen,M., Herwig,R.,
            Shmulevich,D., Elkon,R., Steinfath,M., O'Brien,J.K., Radelof,U.,
            Lehrach,H., Lancet,D. and Shamir,R.
  TITLE     DEFOG: a practical scheme for deciphering families of genes
  JOURNAL   Genomics 80 (3), 295-302 (2002)
   PUBMED   12213199
REFERENCE   3  (bases 1 to 3685)
  AUTHORS   Buettner,J.A., Glusman,G., Ben-Arie,N., Ramos,P., Lancet,D. and
            Evans,G.A.
  TITLE     Organization and evolution of olfactory receptor genes on human
            chromosome 11
  JOURNAL   Genomics 53 (1), 56-68 (1998)
   PUBMED   9787077
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP006437.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000641440.1/ ENSP00000493820.1
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-279               AP006437.2         150390-150668
            280-3685            AP006437.2         152830-156235
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11q11"
     gene            1..3685
                     /gene="OR5D3P"
                     /gene_synonym="OR11-8b; OR11-8c; OR5D3; OR5D4"
                     /note="olfactory receptor family 5 subfamily D member 3
                     pseudogene"
                     /db_xref="GeneID:8594"
                     /db_xref="HGNC:HGNC:8336"
     exon            1..279
                     /gene="OR5D3P"
                     /gene_synonym="OR11-8b; OR11-8c; OR5D3; OR5D4"
                     /inference="alignment:Splign:2.1.0"
     CDS             251..1222
                     /gene="OR5D3P"
                     /gene_synonym="OR11-8b; OR11-8c; OR5D3; OR5D4"
                     /note="olfactory receptor, family 5, subfamily D, member
                     4; olfactory receptor OR11-140"
                     /codon_start=1
                     /product="olfactory receptor family 5 subfamily D member 3
                     pseudogene"
                     /protein_id="NP_001382988.1"
                     /db_xref="CCDS:CCDS91473.1"
                     /db_xref="GeneID:8594"
                     /db_xref="HGNC:HGNC:8336"
                     /translation="MNHSDASVFRIQKNQTAGVTFILLGFSEFPDLQIPLFLVFLTIY
                     TITVMGNLGMIMVIRINPKLHTPMYFFLSHLSFVDFCYSTTITPKLLENLVVEDRIIS
                     FTGCIMQFFFACIFVVTETFMLAAMAYDRFVAVCNPLLYTVAMSQRLCSLLVAASYSW
                     SLVCSLTYTYFLLTLSFCRTNFINNFVCEHAAIVAVSCSDPYMSQKVILVSATFNEIS
                     SLVIILTSYAFIFITVMKMPSTGGRKKAFSTCASHLTAITIFHGTILFLYCVPNSKSS
                     WLMVKVASVFYTVVIPMLNPLIYSLRNKDVKETVRKLVITKLLCHKM"
     exon            280..3685
                     /gene="OR5D3P"
                     /gene_synonym="OR11-8b; OR11-8c; OR5D3; OR5D4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggtccccaa ggccttgggg gcaaatattt gtgacacagt ttggtgctag gacttagttt
       61 ctagatgtga ccttatctct gctatctatg agttttctta ataggttggg taaaaaagta
      121 acatttaaaa tcttcaagga aatatactct cgacactcct actgttgttt tcaggtttgt
      181 ttctattaat taagtgctaa gcgggagcat tattggagtt cgttaatttc agcaaaagat
      241 ccttcagtaa atgaatcact cagatgcctc tgtatttagg attcaaaaaa atcagactgc
      301 tggagtcacc ttcatcctct tgggcttctc agaatttcca gaccttcaga tacccctgtt
      361 cctggtcttc ctgaccatct acacaatcac tgtgatgggg aatctgggca tgatcatggt
      421 catcaggatc aaccccaaac tccacacccc tatgtacttt ttcctcagcc acttgtcctt
      481 tgttgatttc tgttattcca ccacaattac accaaaactg ctggagaact tggttgtgga
      541 agacagaatc atctccttca caggatgcat catgcaattc ttctttgcct gtatatttgt
      601 ggtgacagaa acattcatgc tggcagcgat ggcttatgac agatttgtgg cagtgtgtaa
      661 ccctctgctt tacacagttg caatgtccca gaggctttgc tccttgttag tggctgcatc
      721 atactcttgg agtttagttt gttccttaac atacacatat tttctgttga ctttatcttt
      781 ttgtaggact aacttcatta ataactttgt ctgtgagcac gctgccattg ttgctgtgtc
      841 ctgctctgac ccctacatga gccagaaggt cattttagtt tctgcaacat tcaatgaaat
      901 aagcagcctg gtgatcattc tcacttccta tgctttcatt tttatcactg tcatgaagat
      961 gccttccact ggggggcgca agaaagcgtt ctccacgtgt gcctcccacc tgaccgccat
     1021 taccattttc catgggacta tcctttttct ctactgtgtt cctaactcca aaagttcatg
     1081 gctcatggtc aaggtggcct ctgtctttta cacagtggtc attcccatgc tgaacccctt
     1141 gatctatagc ctcaggaaca aagatgtaaa agagacagtc aggaagttag tcattaccaa
     1201 attattatgt cataaaatgt aatgctagaa atattaatta tttatccttg agagcagcac
     1261 tgcagttgtt caataactag tcattgcatg aaattatgat aaccctccaa ctgacagtac
     1321 aatatctatt cacactgatg tttagtaaaa taactttaaa gttataaata ctgtaagtat
     1381 ggaatctcag accatttaaa ctaaattttt gatcgagaat attgtaatac aaaagttttt
     1441 gtgttagtat acgtttattg tgattgtcca ggtcaaattt cagttcaatt taaatcttgc
     1501 aaaatgtaaa aatttttgag atgatctgaa gaatagtagt ttataatgag gaagtttacc
     1561 tgataacata aaattactat gataagagct gttcagtata aaacactatc tataaaataa
     1621 ttacaattaa ttctgtatgg gcaactttgg cattagaaga tttacagaca aacaaaaata
     1681 aataagaaaa ttatcttcct tacgaagtcc agaatctggt aaagttaagt tatacttggt
     1741 attataaatt atatttttct ttatgcatga taataagaag atggtaaata tttttgcaaa
     1801 taaatgccca tcaccctagt tctgccactg atgccaatat gattgtgcat gttatttatt
     1861 tattaaaaat tttattgaga taattttcta ttcattttcc tttgtaagaa ataatataga
     1921 ggaattccaa ttatctttta accagtttcc ccctaagata gtacaatata acaaccagga
     1981 taatgatatt gagataatac acatacatta ttcaagcatt agttatgtat tgataaaaga
     2041 aatattcata aactcagtga tatctaacag taagcaatcc tttcaaataa gtgacttgac
     2101 tggggtagct ctgttgatat cagttcgacc atttgggtgt caagaatggg gtaactagat
     2161 cagctacctt tggaactaga gacctgtatg tatgtcatct tctttggact ctttggctga
     2221 tagtctttgt tgaaagcaga gccacaatag agtattccaa aaataaaagc atacttaacg
     2281 ttcctgtttg ggtctcacct gttaacattt tatgagtcag agaaaatcac gtccaagccc
     2341 caaagcaaga gttgagaaag ttatctattt cttgtagaac tgcaagatta caagtcaaga
     2401 gtgatgggta cagggagaaa tgaaaaactg ggttcaaaat tgattgaaac atttacatct
     2461 ttaaacacat tcttccttga taatgccaga taactttact gcagaaaaca gataacccat
     2521 ggctctaatt ggttttagag aagttttcaa ataattgaaa taatttgatt gccttaacca
     2581 aatggctggt tgagattaag tataagaact tacattttct ccttgtgtct tgccagtcat
     2641 gattaaggct tacaagcaca gaatatgaag tcaaccatgt gttgaaggtc caatccaagc
     2701 tgttaagtga tacttgtttc ccctcaaggt ttatctttat ttccaaataa aaattcaata
     2761 actttttacc ttaatgcttt acaccaactt acatgtctat gcaacttact gtttaggaat
     2821 atacaacaaa attctcaaca cttacagaat acagcaaaag taacagagga tttactttaa
     2881 tttttaactg tagataatga gtcataatta aatgctctag tcgagtattt ttaaagctgt
     2941 gtgtatgtgt gtgcatatgt gtatagttta ataaagatgt taaggagcac aaaaaaggat
     3001 ttagaaagtt tgagtatgca tcgcagaata tttagtatat tcaataaggt ttccaggata
     3061 aagttagaat atactatttt taaatattgt tttggaagat gtaagctgta atttggtagg
     3121 tttcttttag tacaaaataa aaatcaaaga aaaaaagaat agttgctaat ccctttaata
     3181 caagattttt ttattttggt aaatgttcat aaatgggcag tttacacaaa tataatgcaa
     3241 tttccccccc aaattctcaa attatacttt cagtgtgaaa gcaaacatgt taactgtgaa
     3301 gataaataca ttttagataa tgtaagtgag tttgctaatg gtcatattaa gtgatagcta
     3361 tgggctattt tttttctaca aatacatttg tatgctgctc ttcttttaaa cttttggata
     3421 cagtaggtat aaatgtgact tttttcccat ggagggctgt ggcaggacat ttgctatcat
     3481 atgcacaata ctaaagcaag ttatatagtt taatgctcac ttcttagtgg attaacaact
     3541 ataaaaatta tatctggacc attttatgta aatgtcaact ttcatattat gttgactaaa
     3601 caaagacggc atcaaagatt gtattagtgt tggacaaata tatcattacg tgattatatt
     3661 acataacact ttgcttacgt gagtg
//
