LOCUS       NM_001004711            6123 bp    mRNA    linear   PRI 26-OCT-2024
DEFINITION  Homo sapiens olfactory receptor family 4 subfamily D member 9
            (OR4D9), mRNA.
ACCESSION   NM_001004711 XM_372413
VERSION     NM_001004711.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6123)
  AUTHORS   Taylor,T.D., Noguchi,H., Totoki,Y., Toyoda,A., Kuroki,Y., Dewar,K.,
            Lloyd,C., Itoh,T., Takeda,T., Kim,D.W., She,X., Barlow,K.F.,
            Bloom,T., Bruford,E., Chang,J.L., Cuomo,C.A., Eichler,E.,
            FitzGerald,M.G., Jaffe,D.B., LaButti,K., Nicol,R., Park,H.S.,
            Seaman,C., Sougnez,C., Yang,X., Zimmer,A.R., Zody,M.C.,
            Birren,B.W., Nusbaum,C., Fujiyama,A., Hattori,M., Rogers,J.,
            Lander,E.S. and Sakaki,Y.
  TITLE     Human chromosome 11 DNA sequence and analysis including novel gene
            identification
  JOURNAL   Nature 440 (7083), 497-500 (2006)
   PUBMED   16554811
REFERENCE   2  (bases 1 to 6123)
  AUTHORS   Malnic,B., Godfrey,P.A. and Buck,L.B.
  TITLE     The human olfactory receptor gene family
  JOURNAL   Proc Natl Acad Sci U S A 101 (8), 2584-2589 (2004)
   PUBMED   14983052
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2004 May 4;101(18):7205]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP003778.3.
            
            On Aug 10, 2020 this sequence version replaced NM_001004711.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000641962.1/ ENSP00000493010.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-208               AP003778.3         133663-133870
            209-302             AP003778.3         136797-136890
            303-6123            AP003778.3         137007-142827
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11q12.1"
     gene            1..6123
                     /gene="OR4D9"
                     /gene_synonym="OR11-253"
                     /note="olfactory receptor family 4 subfamily D member 9"
                     /db_xref="GeneID:390199"
                     /db_xref="HGNC:HGNC:15178"
     exon            1..208
                     /gene="OR4D9"
                     /gene_synonym="OR11-253"
                     /inference="alignment:Splign:2.1.0"
     exon            209..302
                     /gene="OR4D9"
                     /gene_synonym="OR11-253"
                     /inference="alignment:Splign:2.1.0"
     exon            303..6123
                     /gene="OR4D9"
                     /gene_synonym="OR11-253"
                     /inference="alignment:Splign:2.1.0"
     CDS             333..1277
                     /gene="OR4D9"
                     /gene_synonym="OR11-253"
                     /note="olfactory receptor, family 4, subfamily D, member 9
                     pseudogene; olfactory receptor OR11-253"
                     /codon_start=1
                     /product="olfactory receptor 4D9"
                     /protein_id="NP_001004711.1"
                     /db_xref="CCDS:CCDS31564.1"
                     /db_xref="GeneID:390199"
                     /db_xref="HGNC:HGNC:15178"
                     /translation="MDQRNYTRVKEFTFLGITQSRELSQVLFTFLFLVYMTTLMGNFL
                     IMVTVTCESHLHTPMYFLLRNLSILDICFSSITAPKVLIDLLSETKTISFSGCVTQMF
                     FFHLLGGADVFSLSVMAFDRYIAISKPLHYMTIMSRGRCTGLIVASWVGGFVHSIAQI
                     SLLLPLPFCGPNVLDTFYCDVPQVLKLACTDTFTLELLMISNNGLVSWFVFFFLLISY
                     TVILMMLRSHTGEGRRKAISTCTSHITVVTLHFVPCIYVYARPFTALPTDTAISVTFT
                     VISPLLNPIIYTLRNQEMKLAMRKLKRRLGQSERILIQ"
ORIGIN      
        1 agaatttccc cagtacctac ttcttctaaa atgcagctga ggcatcataa gaggatcaat
       61 ttcccactta aagattaaac cagcagttag tattagtgcc tatgaacttc tgaaactgaa
      121 aagctgtttg tgctgaattt tgagaaatgc tgcaaatgtg tagaatgttc ctatggaagt
      181 caagactctt aagaagcaaa gaaaagagca gcagcagtga gagaactttg tctcctggga
      241 tgactgaatc aaaaacctgg gtaatctttc atccagtggt ggcatactga cttgcagaca
      301 caagatgaac ctgataaagg atctgtgatt caatggatca gagaaattac accagagtga
      361 aagaatttac cttcctggga attactcagt cccgagaact gagccaggtc ttatttacct
      421 tcctgttttt ggtgtacatg acaactctaa tgggaaactt cctcatcatg gttacagtta
      481 cctgtgaatc tcaccttcat acgcccatgt acttcctgct ccgcaacctg tctattcttg
      541 acatctgctt ttcctccatc acagctccta aggtcctgat agatcttcta tcagagacaa
      601 aaaccatctc cttcagtggc tgtgtcactc aaatgttctt cttccacctt ctggggggag
      661 cagacgtttt ttctctctct gtgatggcgt ttgaccgcta tatagccatc tccaagcccc
      721 tgcactatat gaccatcatg agtagggggc gatgcacagg cctcatcgtg gcttcctggg
      781 tggggggctt tgtccactcc atagcgcaga tttctctatt gctcccactc cctttctgtg
      841 gacccaatgt tcttgacact ttctactgcg atgtccccca ggtcctcaaa cttgcctgca
      901 ctgacacctt cactctggag ctcctgatga tttcaaataa tgggttagtc agttggtttg
      961 tattcttctt tctcctcata tcttacacgg tcatcttgat gatgctgagg tctcacactg
     1021 gggaaggcag gaggaaagcc atctccacct gcacctccca catcaccgtg gtgaccctgc
     1081 atttcgtgcc ctgcatctat gtctatgccc ggcccttcac tgccctcccc acagacactg
     1141 ccatctctgt caccttcact gtcatctccc ctttgctcaa tcctataatt tacacgctga
     1201 ggaatcagga aatgaagttg gccatgagga aactgaagag acggctagga caatcagaaa
     1261 ggattttaat tcaataaggg taagatagta cccatattta aagatagaca ttaaatttca
     1321 ctttctcaaa atgggaaagg agcttgttca tgcccaaaac aaagagatac ctatggccac
     1381 catcgagtcc taaaagaagt tattccatca tatatgttgg ggaccacgtg gatgatactg
     1441 ctctaagaca aaatccactc aagtctttcc ctactcactt tcaattattc attccacaaa
     1501 tttttataga gcatacacta tatgtctgaa agtactggga ttcagattgc tgcaaaaaga
     1561 ttaaatgtag tcaccttcct ggaggcataa cccaaaatac ttattaaaaa atataaacag
     1621 gccaggcgtg gtggctcaca cctgtaatcc cagcactttg ggaggccaag gcaggcagat
     1681 gacctgaggt cgggagttca agaccagcct gaccaacatg gagaaactca gtctctacta
     1741 aaaatacaaa gaaaaatagg ccaggcatgg tggcgcatgc ctgtaatccc agctactcgg
     1801 aaggctgagg caggagaatc acttgaaccc gggaggcaga ggttgcagta agctgagatc
     1861 acaccatcac actccagcct gggcaacaag agcgaaactc catctcaaaa aaataaaaaa
     1921 aataaaaaat aaataaacaa agtgctaggg gaactgtagc cacaatatta cttgagagtt
     1981 tccaaagaca tttaacagcc agtagacatt ttcaagggga aaaagatcag aaaagaacaa
     2041 tccaagcaag gaaaacaaca tgtacttgtc cacatgaggt gtcttatgcc tgtaatctta
     2101 gcactttggg aggctgaggt ggagggatca cttgagccca agagttcaag accagcctgg
     2161 gcaacttagt gaaacctcat ctctacaaaa aatcatgata ataggccggg cgcggtggct
     2221 tatgcctgta atcccagcac tttgggaggc caaggcgggt ggatcacaag gtcaggagat
     2281 cgagaccatc ccggctaaca tggtgaaagc ccatctctac taaaaataca aaaacaaaat
     2341 tagccaggct tggtggtggg tgcctgtagt cccagctact ggggaggctg aggcgggaga
     2401 atggcatgaa cccgggaagc agagcttgca gtgagccgag atcacaccac tgtactccag
     2461 cctgggcaac agagcaagac tctgtccaaa aataataata ataattaata aataaataaa
     2521 aattaaccag acatgatgat gcacacctgt agtcccagct acttgagaga ctgaggcagg
     2581 agaggttgag gctgcagtga gccatgttca cttcactgca ctccagcctg agcaacagat
     2641 caagacactt gtcaaaaaaa aaaaagaaaa gaaaagacaa aaagaaacca gcatgcgcaa
     2701 agaaagaaaa tgaggtgaga ttgtgccaca tttgtgtaac agtgaactca gtgcagccat
     2761 ggcgtaatac actcttgggg tgaatactgg tactggacct ttaaaagaaa agttgggaag
     2821 aataactcca tttatgacca cctgaacaat gcaagcccat gatttctgtt gaggagagag
     2881 gatccccaat tcacttcaag gacataattt cctcctagga gaaggaaata atgctgttag
     2941 tgagagtgtt cataaagaag aatcactgtt gccgggcgca gtggctcacg cctgtaatcc
     3001 cagcactttg ggaggctgag gcgggtggat cacgaggtta ggagatcgag gccagcttga
     3061 ccaacatggt gaaaccccat ttctactaaa aatacaaaaa ttaagccggg tgtggtggta
     3121 agcgcctgta atcccagcta ctcaggaggc taaggcagga gaattgcttg aacctgggag
     3181 gcggaggttg cagtgagcca agattgtgcc actgcactcc agcctgggcg acagagcgag
     3241 actccaactc aaaaaaaaaa aaggagaaga atcactgttg aggctgtgga cagctccttt
     3301 gattttgaga aaaaaatgag caaaggcaga tgccaagctc tcaaatggga agcaactgac
     3361 tcccccttat atagcaggat tagccagatc caaatttcct gttgtttcta tacacagtga
     3421 tctcaccact cctttacctg tgccactcaa tctattagaa ggtaaagaaa gggtataaaa
     3481 agcatgatag tttaattagt gaacctgaga atttgccagt ctctgttgtg aaagagacag
     3541 ggatagtgct aggagaagat ttatctgaca atccagctga tactctgcta agatctattg
     3601 acttcaccat actgtgttcc ccactatgat aaagctcaag ccatagcagc tggcacacat
     3661 ttatcaatca gagtaggcca accactgcaa caaaaatgtc cacggtctaa gtagttagcc
     3721 acaacaaaag tttacttctt gctcatgtca caggccaatg ctggtctgca gaaagagggc
     3781 acagtgccac actgtcattc agaaatgcag gcttctcccg tcttgggctc cacattctct
     3841 agatcctcag aatcctgtcc atgatccagc agatggagaa agggagagag aattaagaat
     3901 aagtgattct cctgcctcag cctcttgagt agctgggact acagacatgc accactatat
     3961 ctggctaatt ttgtatattt ttattttcat agagatgagg tctcactaag ttgcccaggc
     4021 tggttgaaat tcttggactc aaatgatccc tccacttcag cctcccaaaa tgctagaatt
     4081 acaggcatga gacacctcac ctgaacatgc tcatgctgtc ttatgctcca cagtctctag
     4141 atcctcataa tcctgttcat gcatccagca gatagagaaa gggagagaaa ttaagaatta
     4201 tggggaaggg aggggtgtgt ctttatggga cagtcctgga agtggtgtga actacttatg
     4261 accactttca ttggccagcc cttggtcaca tagcctcacc tgacagcaag ggagcctgga
     4321 gaatgaaatc aaactctgct ctcagaaaga agaaaatatg aagaatgaac tctagtgatc
     4381 tcttccacat gtaagattca ctgctaagaa atcacagttg ggttacatta caaagattaa
     4441 gactttgtct ataaaaggat tctcttaata cataaaaatg tttgctacag ggctggctgc
     4501 ggtggctcat gcctgtaatc tcagcacctt gggaggccag ggagggtgga ttgcttgagc
     4561 tcaggagttt cagaacagcc tgggcaacat ggcaaaaccc catctctaca aaaaatataa
     4621 aaattagcag agcatggtgg cacacgcctg tagtcctagc tactcaggag actgagctgg
     4681 gaggatcact tgagcctggg gaagtcaagg gtgcagcgag ccatgaatgc cccaccgtac
     4741 tcccacctgg gcaaaagagt gagaccctgt ctcaaaaaaa aaaaaagaaa aagtttgctg
     4801 gaaaggcaac tagaccctta gaacacacag agagccaaac cgaaatgaag gagatggggg
     4861 aaaatttttc ttaacttaaa ggaagaggga aatgatcaag gtaaaccctg ggattaggat
     4921 gacagtagac tagaagggca gggttccatg agatagaaca ttagggtaga gtgccccaag
     4981 aagataggcc aagaagacaa tcctcataga aagcaactct cacttattcc caaacttttc
     5041 atgggcttgt tgtaaacaag ttcgattaat gcagaagctc ctttagcaat gaatgttctc
     5101 caaaactacc atttgacgca gcaatcccat tgctgggtat atacccaaaa gaaaataaat
     5161 tattctacca aaaagacaca tgcacctgta tgttcacagt agcaaagaca aggaatcagc
     5221 ctaggtgccc atcaatggtg gactagatga agaaaatgtg atacattata caccatgggg
     5281 tactatgcag acatttttaa aaatgaattc atgtgcttta cagtaacatg gatgcagctg
     5341 gaggccgtga tcctaagcaa attaatgcag gaacaaaaaa tcgaatacca catgttctca
     5401 cttatgggtg agagctaacc atcgatttac acatggacac aaagatggga acaaaagaca
     5461 ctgaggccta cttgagggga ggagggtggg aagagtgtga ggtcagaaaa ctacctatta
     5521 ggtactatgc tcactaccaa gattgtcttc ttggccaatc ttctttgggc actctaccct
     5581 aatgttctat ctcatggaac cctgcccttc tagtcactac ctgggtgaca aaatcatttg
     5641 tacaccaaac cccagcaaca cacaatttac tcatgtaaca agcctacaca tgcacccgtt
     5701 gaacctaaaa taaaagttaa acaaaaatga aatcaatgtt atcttctttg ctgattgaca
     5761 tttcctgtgt tctatttcta ccactcaaaa atgttctgaa tttctcactc atagatggga
     5821 attgaacaat gagaacacat ggacacagga aggggaacat cacactctag ggactgttgt
     5881 ggggtggggg gaggggggag ggatagcatt aggagatata cctaatgcta aatgacgagt
     5941 taatgggcac agcacaccag catggcacat gtatatgtat gtaactaacc tgcacattgt
     6001 gcacatgtac cctaaaactt aaagtataat aataacaaaa aaaagaaaag ataaatgaag
     6061 tcaattgagg agataatagg gttttatttt ttcttttcct tgcaatgatt gttacaatgt
     6121 gct
//
