LOCUS       NM_030905               2392 bp    mRNA    linear   PRI 26-OCT-2024
DEFINITION  Homo sapiens olfactory receptor family 2 subfamily J member 2
            (OR2J2), mRNA.
ACCESSION   NM_030905
VERSION     NM_030905.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   St Pourcain,B., Whitehouse,A.J., Ang,W.Q., Warrington,N.M.,
            Glessner,J.T., Wang,K., Timpson,N.J., Evans,D.M., Kemp,J.P.,
            Ring,S.M., McArdle,W.L., Golding,J., Hakonarson,H., Pennell,C.E.
            and Smith,G.D.
  TITLE     Common variation contributes to the genetic architecture of social
            communication traits
  JOURNAL   Mol Autism 4 (1), 34 (2013)
   PUBMED   24047820
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Barcellos,L.F., May,S.L., Ramsay,P.P., Quach,H.L., Lane,J.A.,
            Nititham,J., Noble,J.A., Taylor,K.E., Quach,D.L., Chung,S.A.,
            Kelly,J.A., Moser,K.L., Behrens,T.W., Seldin,M.F., Thomson,G.,
            Harley,J.B., Gaffney,P.M. and Criswell,L.A.
  TITLE     High-density SNP screening of the major histocompatibility complex
            in systemic lupus erythematosus demonstrates strong evidence for
            independent susceptibility regions
  JOURNAL   PLoS Genet 5 (10), e1000696 (2009)
   PUBMED   19851445
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
REFERENCE   3  (bases 1 to 2392)
  AUTHORS   Menashe,I., Aloni,R. and Lancet,D.
  TITLE     A probabilistic classifier for olfactory receptor pseudogenes
  JOURNAL   BMC Bioinformatics 7, 393 (2006)
   PUBMED   16939646
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2392)
  AUTHORS   Malnic,B., Godfrey,P.A. and Buck,L.B.
  TITLE     The human olfactory receptor gene family
  JOURNAL   Proc Natl Acad Sci U S A 101 (8), 2584-2589 (2004)
   PUBMED   14983052
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2004 May 4;101(18):7205]
REFERENCE   5  (bases 1 to 2392)
  AUTHORS   Volz,A., Ehlers,A., Younger,R., Forbes,S., Trowsdale,J.,
            Schnorr,D., Beck,S. and Ziegler,A.
  TITLE     Complex transcription and splicing of odorant receptor genes
  JOURNAL   J Biol Chem 278 (22), 19691-19701 (2003)
   PUBMED   12637542
REFERENCE   6  (bases 1 to 2392)
  AUTHORS   Glusman,G., Yanai,I., Rubin,I. and Lancet,D.
  TITLE     The complete human olfactory subgenome
  JOURNAL   Genome Res 11 (5), 685-702 (2001)
   PUBMED   11337468
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL645937.6.
            
            On Aug 21, 2020 this sequence version replaced NM_030905.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000641417.1/ ENSP00000493401.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-199               AL645937.6         73175-73373
            200-2392            AL645937.6         75887-78079
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6p22.1"
     gene            1..2392
                     /gene="OR2J2"
                     /gene_synonym="dJ80I19.4; hs6M1-6; OR6-19; OR6-8; OR6.3.8;
                     ORL684"
                     /note="olfactory receptor family 2 subfamily J member 2"
                     /db_xref="GeneID:26707"
                     /db_xref="HGNC:HGNC:8260"
     exon            1..199
                     /gene="OR2J2"
                     /gene_synonym="dJ80I19.4; hs6M1-6; OR6-19; OR6-8; OR6.3.8;
                     ORL684"
                     /inference="alignment:Splign:2.1.0"
     exon            200..2392
                     /gene="OR2J2"
                     /gene_synonym="dJ80I19.4; hs6M1-6; OR6-19; OR6-8; OR6.3.8;
                     ORL684"
                     /inference="alignment:Splign:2.1.0"
     CDS             217..1155
                     /gene="OR2J2"
                     /gene_synonym="dJ80I19.4; hs6M1-6; OR6-19; OR6-8; OR6.3.8;
                     ORL684"
                     /note="olfactory receptor OR6-19; olfactory receptor 6-8"
                     /codon_start=1
                     /product="olfactory receptor 2J2"
                     /protein_id="NP_112167.2"
                     /db_xref="CCDS:CCDS43434.1"
                     /db_xref="GeneID:26707"
                     /db_xref="HGNC:HGNC:8260"
                     /translation="MMIKKNASSEDFFILLGFSNWPQLEVVLFVVILIFYLMTLTGNL
                     FIIILSYVDSHLHTPMYFFLSNLSFLDLCYTTSSIPQLLVNLRGPEKTISYAGCMVQL
                     YFVLALGITECVLLVVMSYDRYVAVCRPLHYTVLMHPRFCHLLVAASWVIGFTISALH
                     SSFTFWVPLCGHRLVDHFFCEVPALLRLSCVDTHANELTLMVMSSIFVLIPLILILTT
                     YGAIARAVLSMQSTTGLQKVFRTCGAHLMVVSLFFIPVMCMYLQPPSENSPDQGKFIA
                     LFYTVVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK"
ORIGIN      
        1 gtagcaatga caatcacagt tatttccaga ctctgttctt catagttaga tttaaaacat
       61 tggcaaaaat gttataagaa ggcaattagg ttgatgtttt taggttgtat ggcaaccaga
      121 gagccccttc atcagtttat acctgatgag gttgtaggcc aggtagagag tgacagggaa
      181 cagggacaaa cacaggaagg tataagaaaa agatgaatga tgattaaaaa aaatgcaagt
      241 tcggaagact tctttattct acttggattt tctaattggc ctcagctgga agtagttctc
      301 tttgtggtta tcttgatctt ctacctgatg acactgacag gaaacctgtt catcatcatc
      361 ctgtcatacg tggactccca tctccacaca ccaatgtact tcttcctttc aaacctctca
      421 tttctggatc tctgctacac caccagctct atccctcagt tgctggtgaa tctccggggc
      481 ccggaaaaga ccatctcgta tgctggttgc atggttcaac tttactttgt tcttgcactg
      541 ggaatcacag agtgtgtcct actggtggtg atgtcatatg atcgttatgt agctgtgtgt
      601 agacctttgc attacactgt cctcatgcac cctcgtttct gccacttgtt ggttgcggct
      661 tcttgggtaa ttggttttac tatctcagca cttcattcct cctttacttt ctgggtaccc
      721 ctttgtggac atcgcctagt ggatcacttc ttctgtgaag ttccagcact tctgcgttta
      781 tcatgtgttg acacccatgc aaatgagctg accctcatgg tcatgagctc catttttgtt
      841 ctcatacctc tcattctcat tctcactacc tatggtgcca ttgcccgggc tgtactgagc
      901 atgcaatcaa ccactgggct tcagaaagtg tttaggacat gtggagccca tcttatggtt
      961 gtatctctct ttttcattcc agtcatgtgc atgtatctcc agccaccatc agaaaattct
     1021 cctgatcagg gcaagttcat tgccctcttt tatactgttg tcacaccgag tcttaatcct
     1081 ctaatctaca ctctcagaaa caagcatgta aaaggggcag cgaagagact attggggtgg
     1141 gagtggggga agtgacaggg aaatcatgtt gtctgttgtc attgtttttc ctagggtctt
     1201 agccatcttg aaaggtggtt tccctgcttc tttgtgattt atttttgttc taacagctca
     1261 caaaacagaa tagttcagtc tcacatttgt tgctcttttt attatttagt tctgaaatat
     1321 tatgttgaga taaagtttct gattagtgcc actttgttct tttacaattg tatattttat
     1381 ttctgtgaaa attgtggact gtggtttcaa cgtaaataaa tgtgcatgcg aatagttatg
     1441 aggagattat ttcaaaaatg ttgggaatat ttctaacaat gtgctaaatt atgaactgat
     1501 gatatataca gaaagagaag ggcaatattg caaagactta ggctaaaaag gtttttggtt
     1561 attgaataaa ccttaaatga agctaaaaat agtcacagca aagaaaaatg gtaaacataa
     1621 tgaataacat tgtttaagat atggtaaagg atatatcata agtatttggt tgaaagacac
     1681 tttttaaaga cactaaatta tctaatttat cctgtaggtc tacatacttg tcacattgaa
     1741 cagtaaacta atatctcttt aaaatggctc tttcgttcat ctgtccattt attcattaac
     1801 ttattcttta ttagctaaat cttattgaat gtgtactctc ttccagtttg tgaaattctt
     1861 ggtaacatgt ataaatataa catactctgt ctgaacagaa cacactctct gtcaggaaaa
     1921 atggcaacat aaaagatgaa gtatctgtgc atggcttaat ttgtcactgg gggtaatgct
     1981 aatacattaa gacagctttt aaaagtcaga aacaataaac tctgattact cttcagattg
     2041 tataaatctt tctttcactt tttaaaaatc aaaaacaagg ccgagcacgg tggctcacac
     2101 ctgtaatccc agcactttgg aaggccgagt caggtggatc atgaggtcag gagaccaaga
     2161 ccatcctggc taacaaggtg aaaccccatc tctactaaaa atacaaaaca attagctagg
     2221 catggtggca catgcctgta gtcccattga agctaaactt ttttttcact ttacatgaac
     2281 attttgaaat cactactaaa ttcaatattt tcaacatatt atttcatccg tatgtaaaat
     2341 tattgggatt gcaattgtta tgttttctat aatcacattt ttgaaaataa cc
//
