LOCUS       NM_001004451             969 bp    mRNA    linear   PRI 24-OCT-2024
DEFINITION  Homo sapiens olfactory receptor family 1 subfamily J member 1
            (OR1J1), mRNA.
ACCESSION   NM_001004451 XM_294531
VERSION     NM_001004451.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Humphray,S.J., Oliver,K., Hunt,A.R., Plumb,R.W., Loveland,J.E.,
            Howe,K.L., Andrews,T.D., Searle,S., Hunt,S.E., Scott,C.E.,
            Jones,M.C., Ainscough,R., Almeida,J.P., Ambrose,K.D., Ashwell,R.I.,
            Babbage,A.K., Babbage,S., Bagguley,C.L., Bailey,J., Banerjee,R.,
            Barker,D.J., Barlow,K.F., Bates,K., Beasley,H., Beasley,O.,
            Bird,C.P., Bray-Allen,S., Brown,A.J., Brown,J.Y., Burford,D.,
            Burrill,W., Burton,J., Carder,C., Carter,N.P., Chapman,J.C.,
            Chen,Y., Clarke,G., Clark,S.Y., Clee,C.M., Clegg,S., Collier,R.E.,
            Corby,N., Crosier,M., Cummings,A.T., Davies,J., Dhami,P., Dunn,M.,
            Dutta,I., Dyer,L.W., Earthrowl,M.E., Faulkner,L., Fleming,C.J.,
            Frankish,A., Frankland,J.A., French,L., Fricker,D.G., Garner,P.,
            Garnett,J., Ghori,J., Gilbert,J.G., Glison,C., Grafham,D.V.,
            Gribble,S., Griffiths,C., Griffiths-Jones,S., Grocock,R., Guy,J.,
            Hall,R.E., Hammond,S., Harley,J.L., Harrison,E.S., Hart,E.A.,
            Heath,P.D., Henderson,C.D., Hopkins,B.L., Howard,P.J., Howden,P.J.,
            Huckle,E., Johnson,C., Johnson,D., Joy,A.A., Kay,M., Keenan,S.,
            Kershaw,J.K., Kimberley,A.M., King,A., Knights,A., Laird,G.K.,
            Langford,C., Lawlor,S., Leongamornlert,D.A., Leversha,M., Lloyd,C.,
            Lloyd,D.M., Lovell,J., Martin,S., Mashreghi-Mohammadi,M.,
            Matthews,L., McLaren,S., McLay,K.E., McMurray,A., Milne,S.,
            Nickerson,T., Nisbett,J., Nordsiek,G., Pearce,A.V., Peck,A.I.,
            Porter,K.M., Pandian,R., Pelan,S., Phillimore,B., Povey,S.,
            Ramsey,Y., Rand,V., Scharfe,M., Sehra,H.K., Shownkeen,R.,
            Sims,S.K., Skuce,C.D., Smith,M., Steward,C.A., Swarbreck,D.,
            Sycamore,N., Tester,J., Thorpe,A., Tracey,A., Tromans,A.,
            Thomas,D.W., Wall,M., Wallis,J.M., West,A.P., Whitehead,S.L.,
            Willey,D.L., Williams,S.A., Wilming,L., Wray,P.W., Young,L.,
            Ashurst,J.L., Coulson,A., Blocker,H., Durbin,R., Sulston,J.E.,
            Hubbard,T., Jackson,M.J., Bentley,D.R., Beck,S., Rogers,J. and
            Dunham,I.
  TITLE     DNA sequence and analysis of human chromosome 9
  JOURNAL   Nature 429 (6990), 369-374 (2004)
   PUBMED   15164053
REFERENCE   2  (bases 1 to 969)
  AUTHORS   Malnic,B., Godfrey,P.A. and Buck,L.B.
  TITLE     The human olfactory receptor gene family
  JOURNAL   Proc Natl Acad Sci U S A 101 (8), 2584-2589 (2004)
   PUBMED   14983052
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2004 May 4;101(18):7205]
REFERENCE   3  (bases 1 to 969)
  AUTHORS   Fuchs,T., Malecova,B., Linhart,C., Sharan,R., Khen,M., Herwig,R.,
            Shmulevich,D., Elkon,R., Steinfath,M., O'Brien,J.K., Radelof,U.,
            Lehrach,H., Lancet,D. and Shamir,R.
  TITLE     DEFOG: a practical scheme for deciphering families of genes
  JOURNAL   Genomics 80 (3), 295-302 (2002)
   PUBMED   12213199
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL359636.17.
            
            On Sep 19, 2004 this sequence version replaced XM_294531.4.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC136938.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000259357.3/ ENSP00000259357.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-969               AL359636.17        89274-90242         c
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9q33.2"
     gene            1..969
                     /gene="OR1J1"
                     /gene_synonym="hg32; OR9-18"
                     /note="olfactory receptor family 1 subfamily J member 1"
                     /db_xref="GeneID:347168"
                     /db_xref="HGNC:HGNC:8208"
     CDS             1..969
                     /gene="OR1J1"
                     /gene_synonym="hg32; OR9-18"
                     /note="olfactory receptor OR9-18"
                     /codon_start=1
                     /product="olfactory receptor 1J1"
                     /protein_id="NP_001004451.1"
                     /db_xref="CCDS:CCDS35120.1"
                     /db_xref="GeneID:347168"
                     /db_xref="HGNC:HGNC:8208"
                     /translation="MSPENQSSVSEFLLLGLPIRPEQQAVFFALFLGMYLTTVLGNLL
                     IMLLIQLDSHLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQHLAVFYKGCISQTY
                     FFIFFADLDSFLITSMAYDRYVAICHPLHYATIMTQSQCVMLVAGSWVIACACALLHT
                     LLLAQLSFCADHIIPHYFCDLGALLKLSCSDTSLNQLAIFTAALTAIMLPFLCILVSY
                     GHIGVTILQIPSTKGICKALSTCGSHLSVVTIYYRTIIGLYFLPPSSNTNDKNIIASV
                     IYTAVTPMLNPFIYSLRNKDIKGALRKLLSRSGAVAHACNLNTLGG"
     exon            1..969
                     /gene="OR1J1"
                     /gene_synonym="hg32; OR9-18"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagccctg agaaccagag cagcgtgtcc gagttcctcc tcctgggcct ccccatccgg
       61 ccagagcagc aggccgtgtt cttcgccctg ttcctgggca tgtacctgac cacggtgctg
      121 gggaacctgc tcatcatgct gctcatccag ctagactctc accttcacac ccccatgtac
      181 ttcttcctta gccacttggc cctcactgac atctcctttt catctgtcac tgtccctaag
      241 atgctgatga acatgcagac tcagcaccta gccgtctttt acaagggatg catttcacag
      301 acatattttt tcatattttt tgctgactta gacagtttcc ttatcacttc aatggcatat
      361 gacaggtatg tggccatctg tcatcctcta cattatgcca ccatcatgac tcagagccag
      421 tgtgtcatgc tggtggctgg gtcctgggtc atcgcttgtg cgtgtgctct tttgcatacc
      481 ctcctcctgg cccagctttc cttctgtgct gaccacatca tccctcacta cttctgtgac
      541 cttggtgccc tgctcaagtt gtcctgctca gacacctccc tcaatcagtt agcaatcttt
      601 acagcagcat tgacagccat tatgcttcca ttcctgtgca tcctggtttc ttatggtcac
      661 attggggtca ccatcctcca gattccctct accaagggca tatgcaaagc cttgtccact
      721 tgtggatccc acctctcagt ggtgactatc tattatcgga caattattgg tctctatttt
      781 cttcccccat ccagcaacac caatgacaag aacataattg cttcagtgat atacacagca
      841 gtcactccca tgttgaaccc attcatttac agtctgagaa ataaagacat taagggagcc
      901 ctaagaaaac tcttgagtag gtcaggcgca gtggctcatg cctgtaatct caacactttg
      961 ggaggctga
//
