LOCUS       XM_017010411            3586 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens opsin 5 (OPN5), transcript variant X2,
            mRNA.
ACCESSION   XM_017010411
VERSION     XM_017010411.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017010411.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..3586
                     /gene="OPN5"
                     /gene_synonym="GPR136; GRP136; PGR12; TMEM13"
                     /note="opsin 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 4 ESTs, 3 long
                     SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:221391"
                     /db_xref="HGNC:HGNC:19992"
                     /db_xref="MIM:609042"
     CDS             300..1196
                     /gene="OPN5"
                     /gene_synonym="GPR136; GRP136; PGR12; TMEM13"
                     /codon_start=1
                     /product="opsin-5 isoform X2"
                     /protein_id="XP_016865900.1"
                     /db_xref="GeneID:221391"
                     /db_xref="HGNC:HGNC:19992"
                     /db_xref="MIM:609042"
                     /translation="MSSRRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHRWV
                     FGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAAIWA
                     YASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIV
                     FSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVW
                     SAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGF
                     RLHTVTTVRKSSAVLEIHEEWE"
ORIGIN      
        1 ctttcctgag cctcgcgggg aagttagcga tgcctttttc tgggtaagtt cagtcttata
       61 atccctgact cctgccccat tggcctgtca ctcacaactc atgcttttta tttcatcttc
      121 ttaatttaga tttttttatt tagagtcctc tcactaccct ctaaatctat ggtgtccatt
      181 tttgaagttg agaagtgttt catatctgag tgaactcgaa atcttagttt taacgattgg
      241 aatttttatt tttccttgta gggattctgt ccacatttgg aaatggatat gtcctttaca
      301 tgtcttctag acgaaagaag aagctgagac ccgctgaaat aatgactatc aatttagcag
      361 tctgtgatct ggggatttca gttgtaggca agccgttcac catcatctct tgcttttgtc
      421 accgctgggt gtttggctgg atcggctgcc gctggtatgg atgggctgga tttttctttg
      481 gctgtggaag ccttatcacc atgactgctg tcagcctgga tcgatatttg aaaatctgct
      541 atttatctta tggggtttgg ctgaaaagaa agcacgccta catctgcctg gcagccatct
      601 gggcctatgc ttccttctgg accaccatgc ccttggtagg tctgggggac tacgtacctg
      661 agcccttcgg aacctcgtgc accctggact ggtggctggc ccaggcctcg gtagggggcc
      721 aggttttcat cctgaacatc ctcttcttct gcctcttgct cccaacggct gtgatcgtgt
      781 tctcctacgt aaagatcatt gccaaggtta agtcctcttc caaagaagta gctcatttcg
      841 acagtcggat ccatagcagc catgtgctgg aaatgaaact gacaaaggta gcgatgttga
      901 tttgtgctgg attcctgatt gcctggattc cttatgcagt ggtgtctgtg tggtcagctt
      961 ttggaaggcc agactccatt cccatacagc tctctgtggt gccaacccta cttgcaaaat
     1021 ctgcagcgat gtacaatccc atcatttacc aagttattga ttacaaattt gcctgttgcc
     1081 aaactggtgg tttgaaagca accaagaaga agtctctgga aggcttcagg ctgcacaccg
     1141 taaccacagt caggaagtct tctgctgtgc tggaaattca tgaagagtgg gaataacaaa
     1201 tgttctggtt gtgaagagtg catctgaagt gcttacacgg cgtctggcat atgcagagaa
     1261 attagcttac aaatgttatt tttctgactt ctcgcctcca ctccacttac cctgtcagga
     1321 aaaaataatt cacaaggaat atcaaaacaa tgatgcaccc taggagtatc caagtatctt
     1381 aactgagtta tctcattctg gtatagtggc agagttataa ctaaagagtg ccagaaaccc
     1441 acgctttaaa catcctgcag tgcacacctc ggtctcgtca gtaaggactt cactttcttc
     1501 tgaactgggg cttgtgaaag ctggcctgaa aagcctgatt caaggagatc aggctgtgtc
     1561 tctgactgga gcagctacac tccccatctg taatttgatt tgttctattg cagatgatgt
     1621 actgggcaga ggtgagtgtg gattggtgaa aatctgtttt tatgactggc aaagcagtgc
     1681 aggggggtct ttcactgata agaagcatca tcagtagggt ttgtccctga tgcctttaca
     1741 acagcatctg agcacctctc aagtttttcc aggccagctc cagtttcagt gaggagagtg
     1801 tgggctttct attccccaaa tattcttact acagttaata tgtaggttac tgccccagcc
     1861 caactgcagg ttcccagatg tgagttccat gtaggcagaa actgtccagt tcttgaaatt
     1921 gaattacttc cttgtgtatg tgtttttttc ctacttaaag ctcctcggga tgcttcctct
     1981 caaaagtctt tgaagaataa gaggttaagc taagacaacc tgaatcaatt tttttttttt
     2041 tgtcaaatgc gattgaaatt atccccataa ttcaataaaa tagctttttc ccttctttct
     2101 ttttactttg ttggaaacta tgcaacagaa acaaagtaag aagactctac cttaatttta
     2161 aaggtaactc ttacataaag aagaaagtca ttatgccagg ccagggggag agtggaaagg
     2221 ggaaatttag agaatagaaa caaacttaag catcttgtaa attttgagtg aattgtaaac
     2281 acataatgaa tgaatgagaa gggccagcca ggagtctgtg aaatggtcca gttgggaaat
     2341 gcctaatgca taaacacaaa tcttggtgac aggtaggtta gttatctgtg aactttctaa
     2401 agattaaata aacaataata ggattttgtt aatgtgccaa agtgagttta aaccatgaaa
     2461 gacacgatgc aaatatgcaa gtacctttaa ttgggcataa taaaaagtag tgaggtatgg
     2521 ttaaaataac atttagaaca agagagaagt tagggagaat ttttgtctaa aaagccaaaa
     2581 agtgatagtt gattggtgat tttgttgtta tcaggagaga gaattttctt aatgtaataa
     2641 gttaggtact ttggcaagtg aaatgggttc taggccaatt gcaagtcctt aggattccct
     2701 ggcagctaga aaccttggca ctcccaaaag acagcttcag ttaaaatgac agatgaacat
     2761 gagtcttcaa gtcaaaacta ctgttgtacc acgtccattg aatgtttggt gattcaagtc
     2821 tctgttattc aagaactgat tctgtttttc ctcctgtcaa aaccttggtt gattttgact
     2881 gtagtagcac atctggcagg aatatgacag aaaaaaatta agttaaaaat ataatttcta
     2941 ttcccctatt ttttctgtaa aaggctttat ggggaagaag ggaagaaggt tgacatgagt
     3001 agagatgata cttgcctctg gatgacccag ttgggttctc ctttgactgc cattcaccac
     3061 agttgacctc attaggctcc gaagtatgag aagagcttca ttgccaagtt agtgaaagaa
     3121 gcagatgatt tacttttgct cgagtgggtc tgtagacctc gggaggttag ccatttctct
     3181 tagagtttgg tgtatgtatt aagatacagc atgtatgtag gtatatataa tacatatatg
     3241 tgtgtataca tatatatata tttctggttt gtttaatatc ttttaaaaaa ttttaatgga
     3301 attttttgaa catgtacaaa agagaaagaa tcctacgatg aactcccatg tatccatcat
     3361 ccagcctcaa tagtgatcaa cccatagcat attgtggttc atgttgacac tcatccacct
     3421 ctttccttcc ccatctctcc ccattatttt gagacgaatg agatcctggg atttcgtgaa
     3481 aatattatga atatcttatt tgtgagaaca agatttccca aagcatgatc cccagaaacc
     3541 tagtcctgca aaactactgc aaaaataaag tgttctaatc tccaaa
//
