LOCUS       XM_047427032            6323 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens opioid binding protein/cell adhesion
            molecule like (OPCML), transcript variant X2, mRNA.
ACCESSION   XM_047427032
VERSION     XM_047427032.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..6323
                     /gene="OPCML"
                     /gene_synonym="IGLON1; OBCAM; OPCM"
                     /note="opioid binding protein/cell adhesion molecule like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 mRNAs, 5 ESTs, 648 long SRA reads, 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:4978"
                     /db_xref="HGNC:HGNC:8143"
                     /db_xref="MIM:600632"
     CDS             197..1111
                     /gene="OPCML"
                     /gene_synonym="IGLON1; OBCAM; OPCM"
                     /codon_start=1
                     /product="opioid-binding protein/cell adhesion molecule
                     isoform X2"
                     /protein_id="XP_047282988.1"
                     /db_xref="GeneID:4978"
                     /db_xref="HGNC:HGNC:8143"
                     /db_xref="MIM:600632"
                     /translation="MDNVTVRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSID
                     PRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISS
                     DITVNEGSSVTLLCLAIGRPEPTVTWRHLSVKEGQGFVSEDEYLEISDIKRDQSGEYE
                     CSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQWFKE
                     ETRLATGLDGMRIENKGRMSTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAV
                     IDGVNSASRALACLWLSGTLLAHFFIKF"
ORIGIN      
        1 tttgattatt gttttgagct tcttcaggag agacctcaga agcctaccta cctgtcaatc
       61 ccattggaag gaagtctttg gccagttcct attcatcctt cccaagtggt cccattccat
      121 cttttggctc ctgcagcatg gcggggcaca tggaggagtg cccgtgcgca gcggagatgc
      181 caccttcccc aaagctatgg acaacgtgac ggtccggcag ggggagagcg ccaccctcag
      241 gtgtaccata gatgaccggg taacccgggt ggcctggcta aaccgcagca ccatcctcta
      301 cgctgggaat gacaagtggt ccatagaccc tcgtgtgatc atcctggtca atacaccaac
      361 ccagtacagc atcatgatcc aaaatgtgga tgtgtatgac gaaggtccgt acacctgctc
      421 tgtgcagaca gacaatcatc ccaaaacgtc ccgggttcac ctaatagtgc aagttcctcc
      481 tcagatcatg aatatctcct cagacatcac tgtgaatgag ggaagcagtg tgaccctgct
      541 gtgtcttgct attggcagac cagagccaac tgtgacatgg agacacctgt cagtcaagga
      601 aggccagggc tttgtaagtg aggatgagta cctggagatc tctgacatca agcgagacca
      661 gtccggggag tacgaatgca gcgcgttgaa cgatgtcgct gcgcccgatg tgcggaaagt
      721 aaaaatcact gtaaactatc ctccctatat ctcaaaagcc aagaacactg gtgtttcagt
      781 cggtcagaag ggcatcctga gctgtgaagc ctctgcagtc cccatggctg aattccagtg
      841 gttcaaggaa gaaaccaggt tagccactgg tctggatgga atgaggattg aaaacaaagg
      901 ccgcatgtcc actctgactt tcttcaatgt ttcagaaaag gattatggga actatacttg
      961 tgtggccacg aacaagcttg ggaacaccaa tgccagcatc acattgtatg ggcctggagc
     1021 agtcattgat ggtgtaaact cggcctccag agcactggct tgtctctggc tatcagggac
     1081 cctcttagcc cacttcttca tcaagttttg ataagaaatc ctaggtcctc tgagcaacgc
     1141 ctgcttctcc atatcacaga ctttaatcta cactgcggag agcaaaccag cttgggcttc
     1201 tttttgtttt tttctgttat tctagatttg ttttcttttt gtttttgttt atttgtttgt
     1261 ttgcttttat ttccagcttg aatgagtggg gttgggggcg gggtgggcag ggttctacca
     1321 cgtgtaggat aatcattcat tggtgtgtcc aaaaatgggg tctgctcctg ctaccttgac
     1381 ccttcccttt cctctgcttc tctcctcatc atcattccca acaacatcct ctgccacaca
     1441 caacaaaacg taagtttcat ttgggcaaaa attgagcctc acaataaaca ccctgaagac
     1501 acaacttgac ttataacata gtgcacagca agagctacat ccaagtgtcc tattatctgt
     1561 gattattttc ttaatgacaa tgtacatatg cccccatcca tgttaattat tatctaattc
     1621 cattagggtt cacgtctttt ctttctggga cactatccta ctatatccat atctatagat
     1681 ttcaatatag atgattgtgc catcttctgt agcccctccg ctctactcat tccttccacc
     1741 atctgcagag atttgaagtt tggggctatg catgaaaccc aacactaaat tttgcaagtc
     1801 aagtaaccaa aaaaggggga ggcattttga agatagaacc tctattttaa aaagagaagt
     1861 tcaactcata aacgtgattg ataggtggct gatttattta ggttttgtca agctatctat
     1921 caaagtaatg gtacagttac ccatctactc aaatatctga tttatctcac catccaatta
     1981 tctacccacc tgtcttcctc tctagcaatc tatttactgt ttatcaatct atcaatgtaa
     2041 ttgtctaaca ctcctttcta ttctctccct actactcact atcaattcat ccccatatga
     2101 atctctaacc atattgtatc tctcccactg tattcattta tacaccatca gcagacattg
     2161 gcatcttcaa aattatcttt caacttctgt gaaagccaac gatctcacag gttaacaaaa
     2221 tacaaaagca ataccctgtg ttgtggactc tttaaaatct ggtatcctat ccacccaagg
     2281 gagacactaa cagataggcc aaagtagcaa gctaatgatc agtcactcac tattcccaga
     2341 agagcctgtg ttttctaaaa cactttcttg ggaagcagat cagcctagaa aagttttgat
     2401 tagcactgtg gttttccttt tgcacttgaa ggacaaaggt gccagccttt atgcttctct
     2461 caacccttca agaaagtaca tgtcaggaac ctatggctgg ctttccttag cagcaagaac
     2521 ttgagagaaa aacacatctg tctctgcaat gcaaagtgaa gagtccaccc gcctgagtgg
     2581 gatgacttca gctagagtct cctttctgct ccagttctgg tttaatctgt ttgaaaacta
     2641 tccagtaaaa agctgatgga ggccaattac atggcgggtg tattgacaac tctggtattt
     2701 gtttcaggaa gctcttctaa gctgagggca cttgagcaac tgacttaatt ttcaagcact
     2761 tgattaacac aacactgcaa acagaaggga gaaagtgtca gtgacacagt ttcctctgat
     2821 gcagctgctt ctccaatggc tttggggaag aacttcacca gctcttcagg ttcaaagcag
     2881 acccagcata caaacaagag ctgagccacc tttgctgtct tgtctcctgg gacgagaagg
     2941 actcatccag caaagttgcc tgggattcaa aataaaggca ttgcagaccg cacaggtgtg
     3001 ctgcagggac tgatccacag agaggatgag aatgcagcat caatcgcaga cctgccctgc
     3061 ctcagttgga aaaccttttc aggccctcag tctaaaaaat aaaaaatatg agcaccattg
     3121 aattctgtgc ccttaatgct taactggtct tcttcctctg gtatcagtgt cctctttgtt
     3181 tttgtccatc aaggcacatg agtgtgacct ctgccatggg gaaacacaca cagagatatc
     3241 tatacatata tacatacata caaacatagg ctatcttggc acactaaatg ctaagcactg
     3301 tcttaagagg tagagctggt gtgagtgaaa ttaatgttac attttccagc tgtaaacaga
     3361 catctgcatt tcctagtgag ctgccaggag ccagattcgg gaaccgtaac tgatgtgcca
     3421 ggaatggtgc attgattccc agttccaggg atgatcatga gcaggcgcaa aatcagaatt
     3481 aaaggtcgca catagacgtt tcagatctgt caccaccttc agcatctgga gttgagttgg
     3541 tgtcagatag tgtatgagaa ttaaatgtgt catctgagca tgctactgat gataaatttg
     3601 ttactttgga gttgaataaa tgtgaaggct gtgaagagtg gacagtcttg gagaacacag
     3661 tgcttgaaat ggacaagctg gacctattcc tcactccaag acttgttcta caggaaaggg
     3721 tccatgctcc tttggccaag atcatcagaa cctctcaacc caacaaggct ggcttcaggg
     3781 ccactatgga accctgctgt tcccccttcc aaaggatact aagatgcccc tctggtgggt
     3841 acctatccca gccacgtttc agagggagag aaatgctaca gttgatcctc atctgtctgg
     3901 ggtaaagaca acaaagtaaa tacaacccaa ggcaactggg gtactcactg ggagtgaaaa
     3961 tgacttcttc acaacagaca tatttctgct tctgtgtttt tgtgtttctt tggtggggat
     4021 ggcttcatgg gagagtggct gtcacccatc attttgaagc atatagaaca acaaatgctt
     4081 acacaagaca atatccacac ttttccaact tcacacacgg agagtacatg gagaatgcct
     4141 acaggctaga tttgttcagg gtgccagtag tgggcatggg gtgggggcaa ggcaggacaa
     4201 aacatacaag tctgagcaag tacatctctt gcaggttttc cacatgaaaa ggaagccaaa
     4261 taagtcctgt taggagatta ggtgagagga attagcaatg tagggactct gaaacccttc
     4321 cccttcccaa aacagagttc atatgcactt ccaccaaagt aatgccaatg aaagtgctcg
     4381 tgttaaggct gcagccaagc ttgtttttca gtagtttaat gtcaagtgcc tgatacagtc
     4441 gactgcaagt ctaaacaagc atgtttagtt tttctcattc ttgctttaat tcagggaggg
     4501 ggagatgtag agaagtggtt gtgaaaacat gtacaggctt tatgcagagc actgcgcatg
     4561 gctgttctgc tgcaactgtg ctccacgaaa cagaagaaaa ggtaaggtgt tgtgtcacaa
     4621 agaggcccca gtctctttct tcttacatcc atgcctctta ctagatgata catttacaga
     4681 ttgggcagtt tgttctcaaa acctgggtga gaagactatt cctggactct agcaacttca
     4741 aaactgaggc tgggtttcag aatctttttc tgcatcaatt cagtcaattt gccttcaaca
     4801 aagagaagtc agcaagttct atttatgctg aaagaactat tccatgagaa aagcagagaa
     4861 ccccaaagtg ggcaggcaac cccgacgaga gcttatccct gtggcggcat caggagtggc
     4921 tgtacattga attttcaagt gctggttggc tgtcgccagc ccatggtagg aggggaggaa
     4981 tggcttaaga tgaggtaaga tctggtggtg gggcatcttt cctcaattcc atactgactt
     5041 tgatcttgag aaagaaaaac tggctatgca ttacctaaaa ccagtccaaa atgaaacaga
     5101 ccaacacaca cacaaaagca aattgtcaat ccctttggaa ttaagggaag cagcataagg
     5161 tttttctttt tggaaaaaat gcatttattt tctttttctc caacagcaag aatcttttgt
     5221 tttcattttg cacgtgacct tatcttggaa actcttatac ccaattgcct cccctcctat
     5281 tattcagagc ttccctgtct ttttacttga agacaaataa gtttgagcac ttgagtaaaa
     5341 cttcacaggt gtgtaagtag gaaggcaaca ttttcaaaaa gagaccatat gatgagaacg
     5401 cctaatgatc accacatgca aacaaacaaa actgccagtc tcatttccca catttcttac
     5461 ttaagagaag agaagtaaat gaaaggaaga agaaatagat ttgtaattaa agatgtggca
     5521 aaaaagatag ggctgagcca gttcaattta gccttcaggt gcagaatact tagagtccaa
     5581 agaaatgtgg agtggactta attagatgca gttgtcttta tcctgaaagt agtgagctaa
     5641 gcctaatttc cagcattttg aaagagattc ctttttgttt ctttccatgg tgccctcttt
     5701 aaggcacaga gttgctccac accactgggt ggagaaagaa agattgcgaa ccctcgacca
     5761 tccttttgag gctacattct atgttatttg gcagatttat aaagctatca gtaataacaa
     5821 tgctatgtac tgcaagctgc ccttgtgtta gttaaaggga gcatttttaa tcgttcggaa
     5881 attttcgtga catgtcaagt gcagttgtga ggactgtgtg ggtgaacgaa aatgtgtctg
     5941 tcaagttcag agtcctttag atttaaaaaa aaattatgac ttatcaatgg tgccgttata
     6001 gctgtgtcag acaatgggtg tgcccattct cacaattatc cttcaaaaaa aatctatgtt
     6061 caaatgcttt aaaaatttat cacacgatac aagagtatga ctttgtcagc cttctagagt
     6121 tctttttttc ttttattttc tttcgtattt tttccttcaa aaaatcaatg aagacttgat
     6181 ttctgtcaat aattgtatca agggtgaata tactacctga attttgtgca tgttacattg
     6241 tagttgtaac cttttctaat tcaggatgaa tacgagatgg ttgtgattgt gcagtgtacc
     6301 aataaagttc gagaaatttg taa
//
