LOCUS       NM_017561               2559 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens NUT family member 2F (NUTM2F), mRNA.
ACCESSION   NM_017561 XM_001133873 XM_030729
VERSION     NM_017561.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC130390.1 and AL691447.18.
            
            On May 17, 2019 this sequence version replaced NM_017561.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC143798.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000253262.9/ ENSP00000253262.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-376               BC130390.1         1-376
            377-648             AL691447.18        76120-76391         c
            649-1616            BC130390.1         649-1616
            1617-2559           AL691447.18        68994-69936         c
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9q22.32"
     gene            1..2559
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /note="NUT family member 2F"
                     /db_xref="GeneID:54754"
                     /db_xref="HGNC:HGNC:23450"
     exon            1..37
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..2292
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /note="protein FAM22F; family with sequence similarity 22,
                     member F"
                     /codon_start=1
                     /product="NUT family member 2F"
                     /protein_id="NP_060031.1"
                     /db_xref="CCDS:CCDS47994.1"
                     /db_xref="GeneID:54754"
                     /db_xref="HGNC:HGNC:23450"
                     /translation="MASNGAYPVLGPGVTVNPGTSLSVFTALPFATPAPGPAHRPPLV
                     TAVVPPAGPLVLSAFPSTPLVAGQDGRGPSGAGASNVFVQMRTEVGPVKPPQAQTLIL
                     TQAPLVWQAPGTLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGGWSHGLPLPPP
                     PPAAQVAPIVSPGNARPWPQGAHGEGSLAPSQAKARPDDSCKPKSVYENFRLWQHYKP
                     LARRHLPQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWQAMREWQHTSNFDRMIFY
                     EMAEKFLEFEAEEEMQIQKSQWMKGPQSLPPPAPPRLEPRGPPAPEVVKQPVYLPSKD
                     GPKAPTACLPPPRPQRPAETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEIPP
                     EVVQEYVDIMEELLGSHPGDTGEPEGQREKGKVEQPQEEDGITSDPGLLSYIDKLCSQ
                     EDFVTKVEAVIHPRFLEELLSPDPQMDFLALSQELEQEEGLTLAQLVEKRLLSLKEKG
                     CGRAAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQGQGRVR
                     TGMARSEDPAVLLGCQDSPRLKAVRPTSPPQDHRPTCPGLGTKDALGLPGESPVKESH
                     GLAKGSSEETELPGMVYVVGSHHRLRPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQ
                     KRGLSPSPSPASKSKKRPLFGSPSPAEKTPHPGPGLRVSGEQSLAWGLGGPSQSQKRK
                     GDPLASRRKKKRHCSQ"
     exon            38..734
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     exon            735..863
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     exon            864..1003
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1389
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     exon            1390..1506
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     exon            1507..2559
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2536..2541
                     /regulatory_class="polyA_signal_sequence"
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /note="hexamer: AATAAA"
     polyA_site      2559
                     /gene="NUTM2F"
                     /gene_synonym="FAM22F; NUTMF"
                     /note="major polyA site"
ORIGIN      
        1 gtcagtgccc agcctgaggg gatggcttca aatggagcat acccagtgct gggacccggc
       61 gtgaccgtga accctggcac ctccctgtct gtgttcacgg ctctgccctt tgccacaccc
      121 gctcccggcc cagcacacag gccgcccctc gtgactgcag tggttcctcc agccggccct
      181 ctggtgctct ctgccttccc cagcacccct ctagtggcag gacaggatgg ccgcggcccg
      241 agtggggccg gggcttccaa cgtctttgtc cagatgagga cagaagtggg gcctgtgaag
      301 ccccctcagg cacagacctt gatcctaact caggcccccc tcgtctggca ggctccaggc
      361 accctctgtg gaggtgtcat gtgtccacct cccctactcc tggcagctgc tcctggggtg
      421 cccgttacct ctgcccaggt ggttgggggc acccaggcct gtgagggagg ctggtcccat
      481 ggccttcctc ttccaccacc accaccggct gcccaggtgg cccccatcgt gtccccaggg
      541 aacgctaggc catggccaca aggggctcat ggagagggca gcctggctcc ctcccaggcc
      601 aaggcccggc cggacgactc ctgtaaaccc aagagtgtct atgagaactt ccgactctgg
      661 cagcactaca agcccctggc ccggaggcac cttccccaga gtcctgacac tgaagcgctt
      721 tcctgcttcc tcatcccagt tctccgatcc ctggcccggc ggaagcccac catgacgctg
      781 gaggagggac tgtggcaggc catgcgggaa tggcagcaca cgagcaactt tgaccggatg
      841 atcttctacg agatggcgga aaagttcctg gaatttgagg ctgaggagga gatgcagatt
      901 cagaaatcgc agtggatgaa ggggccccag agcctgcctc ctccagcccc gccgaggctt
      961 gaacctcgag gaccccctgc ccctgaggtg gtcaagcagc cagtgtacct tcccagcaag
     1021 gatggcccca aggccccgac tgcctgcctg ccaccaccca ggccccagag gccagcggag
     1081 accaaggccc acctgccacc acccaggccc cagaggccag cggagaccaa cgcccacctg
     1141 ccaccaccca ggccccagag gccagcggag accaaggtcc ctgaggagat cccccctgaa
     1201 gtggtgcagg agtatgtgga catcatggag gagctgctgg ggtctcaccc tggggacaca
     1261 ggggagcctg agggacaacg ggaaaagggc aaagtggagc agccgcagga agaggacggg
     1321 ataacctcag acccgggcct cctgagctac attgacaagc tgtgttccca ggaagacttt
     1381 gtcaccaagg tggaggccgt cattcacccc cgattcctgg aagaattgct ttccccagat
     1441 ccacagatgg atttcttggc cctaagccag gagctggagc aggaggaagg actcaccctt
     1501 gcccagctag tggagaagcg cctcctgtcc ttgaaggaga aagggtgcgg gagggcagcc
     1561 cctcgacatg gcacggccag gttggactca agtccttctg agtttgcagc tggccaagaa
     1621 gcagcgagag aggtccctga cccccaacaa agggtcagcg tggaaacctc cccaccccag
     1681 acagctgccc aggaccctca gggacagggc agagtgcgca ctggcatggc caggtccgaa
     1741 gaccctgctg tgcttttggg atgtcaggat tcccccaggc tgaaggctgt ccggccaacc
     1801 tctcctcccc aggaccacag acccacctgc cccggcctgg ggaccaagga cgccttgggt
     1861 ctccctggag agtctcctgt caaggagtca catgggctgg ctaaggggtc aagtgaggag
     1921 acggaactcc ctggcatggt ctatgtcgtg ggttcccacc acaggctgag gccctggagg
     1981 ctgtcccaga gccctgtccc ttcctcgggc cttctcagcc caggagggag aggaccccag
     2041 ggagctcttc agtctccatc tgctcagaaa agaggcctca gcccatcacc ttctcctgcc
     2101 agcaagtcca agaagcgacc tctctttgga agcccatccc ctgctgaaaa gacaccgcac
     2161 ccagggcctg ggctcagggt ctctggggag caatccctgg cttgggggct gggtggcccc
     2221 tcacagtctc aaaagagaaa gggtgacccc ttggcctcca ggaggaagaa gaagcggcat
     2281 tgtagccagt aggggccgcc atggggcaga ctctctgatg ccagtcccca aaagtggggc
     2341 tctgaagtct cggaccctca tggcacccgg tgccccaaag caaaggctgc ttctcctcca
     2401 gtgctgatct tgctgggcct tagctttgga gggtagggga aggaggggag ggagaaggtg
     2461 gctgaacggg gagggcagga agggagggcc tggggggtgg gaagcagtgc cttgggggcc
     2521 ttgtgtgtaa atgtgaataa atgtagttgt tttggaaaa
//
