LOCUS       XM_047424784            3131 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens NOP2/Sun RNA methyltransferase 6 (NSUN6),
            transcript variant X16, mRNA.
ACCESSION   XM_047424784
VERSION     XM_047424784.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..3131
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /note="NOP2/Sun RNA methyltransferase 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 120 long SRA reads, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     39 samples with support for all annotated introns"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
     CDS             385..1299
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /codon_start=1
                     /product="tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
                     isoform X8"
                     /protein_id="XP_047280740.1"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
                     /translation="MSIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLK
                     HLSHPPSFTTVRVNTHLASVQHVKNLLLDELQKQFNGLSVPILQHPDLQDVLLIPVIG
                     PRKNIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKK
                     GAKEFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPRYLFL
                     QNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQVCCGLLEVHPRPCLTGY
                     HQWRLQNSKNCCLFLPLEASSERALARC"
     polyA_site      3131
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatagaaaag ataaagggac cgagctgctg tcagcctggc ttactgatct gcgtccgttt
       61 caccacggat tcagttacta agcatttttt tctttttttg gttctttgca acgtgagtgg
      121 cattggctca gtgatttcca tgagcatctc taccagaaaa cattgcctcg atgaggtgtg
      181 gtggaagccc ggcagcccct tctaatcggc taggcttgag aaagcgtgta cctctgcatt
      241 tccgaaatta actcagcgtg atcggcaaga ttttcctcag catctggtgt caagacactc
      301 gtcactatta attcggaaag aaaaaaaaaa acaaaacacc gttttccagc atttctcttg
      361 gtggagaact aaacaacagg aaaaatgtct attttcccta agatatcttt gagacctgag
      421 gttgaaaact atcttaagga aggctttatg aataaggaga ttgtgactgc tttaggtaaa
      481 caagaagcag aaaggaagtt tgaaactttg ttaaagcacc tgtcacatcc tccatcattt
      541 acaactgtca gagtgaatac acatttagcc tcagtacaac atgtgaaaaa tctgttactt
      601 gatgaacttc agaagcagtt taatggatta agtgttccta ttcttcaaca tccagacctt
      661 caagatgtgt tacttattcc tgttattgga cccagaaaga atattaaaaa acaacagtgt
      721 gaagccattg ttggagccca gtgtggcaat gcagttttaa gaggagccca tgtctatgcc
      781 ccaggaattg tgtcagcatc acaatttatg aaagctggag atgttatttc tgtatactct
      841 gatattaaag gaaaatgtaa gaaaggagcc aaagaatttg atggaacaaa agtatttctt
      901 ggaaatggga tttctgaact aagccgcaaa gaaatcttca gtggattacc tgaactgaaa
      961 ggcatgggca taagaatgac agaaccagta tatctcagcc cttcatttga cagtgtactg
     1021 ccccgttact tatttttaca aaatttgcca tctgccttag taagtcatgt actaaatcct
     1081 caacctggag agaagattct agacttgtgt gcagcacctg gagggaaaac aacacacatt
     1141 gcagcactaa tgcatgatca ggtctgctgc ggtttgctgg aggtccaccc cagaccctgt
     1201 ttgactgggt atcaccagtg gaggctgcag aacagcaaaa attgctgcct gttccttcct
     1261 ctggaagctt catctgaaag ggcactggcc cgatgctagc tggaactctc ctgcatgagg
     1321 tgtctgtcga cccctgttgg gtggtctctc ctagtcagga ggcacggaga tcagggaccc
     1381 acttgaggca atctgtccct tagcagagct ggtacactgt gctgggagaa tcccccttgt
     1441 caggatcagc ttctctcttc agagcccgca ggctggaaag attaagtctg cccaagctgt
     1501 gcccacagcc acccctcccc ccaggtgctc tgtccaaggg aaatgagagt tttatctgta
     1561 agcccctgag tgggcctgct gcctgtcctt cagagatgcc ctgcccagtg aggaggaatc
     1621 tagagaagca gtctggccac aactgctttg ctgtgctgcg gtcaattctt cccagtccaa
     1681 acctcccagt ctccttagca ctgtcaaggt acaacagcct cctgaagact cagtaatggc
     1741 ggatgcccac caagctcggt catcccacgt tgactccaga ctgctgtgct ggctgtgaga
     1801 atttcaagcc agtggttctt agcttgctgg gctccgtgac agtgggacct actgagtgag
     1861 accacttggc tccctggcat tagccccctt tccaggggag taaacggttc tgtcttactg
     1921 gggttccagg tgccactgag gtacaaaaaa aaaaactaca gctagctcgg tgcctgccca
     1981 aatggccgcc cagttttgtg cttgaaaccc agggcccatg tgtaggctca tgagggaatc
     2041 tcctgatctg tggattgcaa aaaccatggg aaaagcgtag tacccagcct gggtagcaca
     2101 gtttgttcct cacagcttct cttggctggg ggagggaggc cccccagctg cttgcacttc
     2161 ctgggtgagt gacgccccat cctatttctg ctggctgtcc gtgcgttgca cccactgcct
     2221 aaccagtccc agtgagatga actgggtacc tcagttagaa atgcagaaat cactcacgtt
     2281 ctgcattggt ctcgctggga gctacagact ggagctgttt ctattcagct ctcttggccc
     2341 ctcccaaatt ttgacctctt atctttattg actttgactt aaagtgttac tatataaaat
     2401 tttcttgaac tgcgttttat accataccaa aatattttgc tatgctatac agaggttttg
     2461 gcttatattt ttccagtttt ggttgccagg gttcacagga attatatgtg gctagctggg
     2521 aaatattaaa atgaccagtc atacaagtaa cattcatttg catctcaaag cactttaagg
     2581 ccgccgtcta atagcattag ctcatgttgt tccagaggtg agcaaggcac atcaaattgg
     2641 tgatttttaa tgtttgcctc cagtggatgt ttttaagtgt ctttcgaaga ttgcaaatac
     2701 ttttggtgtt gagttttgtt gattaaaagt agctagttat tataagatta tttttctggc
     2761 aagaatgtgt attttcttaa tggaaagcca taagtattta atgtgaattg gatatacatg
     2821 agaggtgaag ccaactggac ttcctgggtc gagtggggac ttggagaacc tttctgtcga
     2881 gctagaggat tgtaaacgca ccaatcagtg ctctgtgtct agctaaagga ttgtaaatgc
     2941 accaatcagc actgtgtaaa atggaccaat cagcgctctg taaaatggac caataggcag
     3001 gatgtgggcg gggccaaata agggaataaa agctggccac cagagccagt agctgcaagc
     3061 cgctagggtc cccttccaca tagtggaaac tttgttcttt cgttcttcac aataaatctt
     3121 gctgccgctg a
//
