LOCUS       XM_047424782            1528 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens NOP2/Sun RNA methyltransferase 6 (NSUN6),
            transcript variant X13, mRNA.
ACCESSION   XM_047424782
VERSION     XM_047424782.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..1528
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /note="NOP2/Sun RNA methyltransferase 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 196 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     38 samples with support for all annotated introns"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
     CDS             385..1506
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /codon_start=1
                     /product="tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
                     isoform X7"
                     /protein_id="XP_047280738.1"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
                     /translation="MSIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLK
                     HLSHPPSFTTVRVNTHLASVQHVKNLLLDELQKQFNGLSVPILQHPDLQDVLLIPVIG
                     PRKNIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKK
                     GAKEFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPRYLFL
                     QNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIK
                     QNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPN
                     MACTWSVKEVASYQPLQRKLFTAVCGGGSAAEARGCAGL"
     polyA_site      1528
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatagaaaag ataaagggac cgagctgctg tcagcctggc ttactgatct gcgtccgttt
       61 caccacggat tcagttacta agcatttttt tctttttttg gttctttgca acgtgagtgg
      121 cattggctca gtgatttcca tgagcatctc taccagaaaa cattgcctcg atgaggtgtg
      181 gtggaagccc ggcagcccct tctaatcggc taggcttgag aaagcgtgta cctctgcatt
      241 tccgaaatta actcagcgtg atcggcaaga ttttcctcag catctggtgt caagacactc
      301 gtcactatta attcggaaag aaaaaaaaaa acaaaacacc gttttccagc atttctcttg
      361 gtggagaact aaacaacagg aaaaatgtct attttcccta agatatcttt gagacctgag
      421 gttgaaaact atcttaagga aggctttatg aataaggaga ttgtgactgc tttaggtaaa
      481 caagaagcag aaaggaagtt tgaaactttg ttaaagcacc tgtcacatcc tccatcattt
      541 acaactgtca gagtgaatac acatttagcc tcagtacaac atgtgaaaaa tctgttactt
      601 gatgaacttc agaagcagtt taatggatta agtgttccta ttcttcaaca tccagacctt
      661 caagatgtgt tacttattcc tgttattgga cccagaaaga atattaaaaa acaacagtgt
      721 gaagccattg ttggagccca gtgtggcaat gcagttttaa gaggagccca tgtctatgcc
      781 ccaggaattg tgtcagcatc acaatttatg aaagctggag atgttatttc tgtatactct
      841 gatattaaag gaaaatgtaa gaaaggagcc aaagaatttg atggaacaaa agtatttctt
      901 ggaaatggga tttctgaact aagccgcaaa gaaatcttca gtggattacc tgaactgaaa
      961 ggcatgggca taagaatgac agaaccagta tatctcagcc cttcatttga cagtgtactg
     1021 ccccgttact tatttttaca aaatttgcca tctgccttag taagtcatgt actaaatcct
     1081 caacctggag agaagattct agacttgtgt gcagcacctg gagggaaaac aacacacatt
     1141 gcagcactaa tgcatgatca gggagaagtt atagcactgg ataaaatctt caacaaagta
     1201 gaaaaaatca aacagaatgc cttattgtta gggctgaatt ccatcagggc attttgtttt
     1261 gatggaacaa aggcggttaa acttgatatg gtggaggaca cagaaggaga acctccattt
     1321 ctaccagaat cctttgaccg aattcttctg gatgcaccct gtagtggaat gggacagaga
     1381 ccaaacatgg cctgtacttg gtctgtgaag gaagtggcat catatcagcc attacagcga
     1441 aaactcttca ctgcagtatg tggtggcggt tcagctgctg aagccagagg gtgtgctggt
     1501 ttatagcacg tgcactataa cactggcc
//
