LOCUS       XM_011519384            2195 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens NOP2/Sun RNA methyltransferase 6 (NSUN6),
            transcript variant X5, mRNA.
ACCESSION   XM_011519384
VERSION     XM_011519384.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011519384.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..2195
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /note="NOP2/Sun RNA methyltransferase 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 88 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
     CDS             438..1823
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /codon_start=1
                     /product="tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
                     isoform X3"
                     /protein_id="XP_011517686.1"
                     /db_xref="GeneID:221078"
                     /db_xref="HGNC:HGNC:23529"
                     /db_xref="MIM:617199"
                     /translation="MFHKRGKKNGKFSIVTALGKQEAERKFETLLKHLSHPPSFTTVR
                     VNTHLASVQHVKNLLLDELQKQFNGLSVPILQHPDLQDVLLIPVIGPRKNIKKQQCEA
                     IVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKKGAKEFDGTKVFL
                     GNGISELSRKEIFSGLPELKYVIRGMGIRMTEPVYLSPSFDSVLPRYLFLQNLPSALV
                     SHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGL
                     NSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPNMACTWSVK
                     EVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQE
                     PQIGGEGMRGAGLSCEQLKQLQRFDPSAVPLPDTDMDSLREARREDMLRLANKDSIGF
                     FIAKFVKCKST"
     polyA_site      2195
                     /gene="NSUN6"
                     /gene_synonym="4933414E04Rik; ARL5B-AS1; MRT82; NOPD1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acttccggta ggagagtccc aaacggccag cggctgggaa tttgcggttc tagcattgaa
       61 aagaaaagct tcacagcctg gcatgaaacg aaactgaatg tccttgaaac cagttgacgg
      121 aggagcaagc ttaaaatttt tttagactct gacttcagtc agatggttgg attttaacct
      181 tggcaacgtg gccttttaac atgccaaact cttgagttaa cctgtacaag gagaatgtat
      241 gacttacgtc ctcccagtgc tatggtttaa agacccttta agacttagat gcaggataat
      301 atgctccaac gttacaacat taaaggtggg aaggatacga gcaagataaa gcagcgaggg
      361 atttaagtct ggcaacagtt ggactgctgg attttcagag aagtgttccc caaagcaaat
      421 tatagtgcta atttccaatg ttccataagc gtggcaagaa aaatgggaag ttctcgattg
      481 tgactgcttt aggtaaacaa gaagcagaaa ggaagtttga aactttgtta aagcacctgt
      541 cacatcctcc atcatttaca actgtcagag tgaatacaca tttagcctca gtacaacatg
      601 tgaaaaatct gttacttgat gaacttcaga agcagtttaa tggattaagt gttcctattc
      661 ttcaacatcc agaccttcaa gatgtgttac ttattcctgt tattggaccc agaaagaata
      721 ttaaaaaaca acagtgtgaa gccattgttg gagcccagtg tggcaatgca gttttaagag
      781 gagcccatgt ctatgcccca ggaattgtgt cagcatcaca atttatgaaa gctggagatg
      841 ttatttctgt atactctgat attaaaggaa aatgtaagaa aggagccaaa gaatttgatg
      901 gaacaaaagt atttcttgga aatgggattt ctgaactaag ccgcaaagaa atcttcagtg
      961 gattacctga actgaagtat gtcatcagag gcatgggcat aagaatgaca gaaccagtat
     1021 atctcagccc ttcatttgac agtgtactgc cccgttactt atttttacaa aatttgccat
     1081 ctgccttagt aagtcatgta ctaaatcctc aacctggaga gaagattcta gacttgtgtg
     1141 cagcacctgg agggaaaaca acacacattg cagcactaat gcatgatcag ggagaagtta
     1201 tagcactgga taaaatcttc aacaaagtag aaaaaatcaa acagaatgcc ttattgttag
     1261 ggctgaattc catcagggca ttttgttttg atggaacaaa ggcggttaaa cttgatatgg
     1321 tggaggacac agaaggagaa cctccatttc taccagaatc ctttgaccga attcttctgg
     1381 atgcaccctg tagtggaatg ggacagagac caaacatggc ctgtacttgg tctgtgaagg
     1441 aagtggcatc atatcagcca ttacagcgaa aactcttcac tgcagcggtt cagctgctga
     1501 agccagaggg tgtgctggtt tatagcacgt gcactataac actggccgaa aatgaagaac
     1561 aggttgcctg ggccctgaca aaatttcctt gccttcagct tcagccccag gaaccgcaga
     1621 ttggaggaga aggaatgagg ggagctgggc tctcatgtga acagttgaaa cagctgcagc
     1681 gatttgatcc atcggctgtg ccattaccgg acactgacat ggactctctt agagaggcca
     1741 gaagagaaga catgttgcgt ctggctaata aggactctat aggttttttt attgcaaaat
     1801 ttgtaaaatg caaaagcaca taggagaggg atggatgctc agaaatgaaa attccaaaca
     1861 tttgctgtct gtggtttttt tttttttaac caaagtgttg tcaggccaac tgaatgatga
     1921 tgtggttgct atggaaacag aaaaggctgc cagctgtttt accagggatc cagagacata
     1981 gaggaagtag ggggtggtat gagattatat tttctgtttt taaaagattt ttttttttta
     2041 tgtatttagt agagtataaa gaaaagcaga tgcctataga tgtctggagc atattttcat
     2101 ttgtgatcta atgttttaat ttgtaaagtg tacaagtcat ttttaatgtt aaaaattagt
     2161 gaatctaaca aaaggaataa attagcaata tttga
//
