LOCUS       XM_047425976            5571 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens neuropilin 1 (NRP1), transcript variant X2,
            mRNA.
ACCESSION   XM_047425976
VERSION     XM_047425976.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..5571
                     /gene="NRP1"
                     /gene_synonym="BDCA4; CD304; NP1; NRP; VEGF165R"
                     /note="neuropilin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 68 ESTs, 1255
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 116 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:8829"
                     /db_xref="HGNC:HGNC:8004"
                     /db_xref="MIM:602069"
     CDS             286..2988
                     /gene="NRP1"
                     /gene_synonym="BDCA4; CD304; NP1; NRP; VEGF165R"
                     /codon_start=1
                     /product="neuropilin-1 isoform X3"
                     /protein_id="XP_047281932.1"
                     /db_xref="GeneID:8829"
                     /db_xref="HGNC:HGNC:8004"
                     /db_xref="MIM:602069"
                     /translation="MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGY
                     PHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGK
                     FCGKIAPPPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKS
                     PGFPEKYPNSLECTYIVFVPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFP
                     DVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCM
                     EALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLR
                     FVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVV
                     AVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVSGLISDSQITSS
                     NQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHREN
                     KVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYP
                     ERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLVDECDDDQANCHSGTGGTTVLATEK
                     PTVIDSTIQSEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTAG
                     DGNFIYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPE
                     EYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGNLGGIAVDDISINNHI
                     SQEDCARSTPGYEGEGEGDKNISRKPGNVLKTLDPILITIIAMSALGVLLGAVCGVVL
                     YCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNTQSTYSEA"
ORIGIN      
        1 agacatggcc cgggcagtgg ctcctggaag aggaacaagt gtgggaaaag ggagaggaag
       61 ccggagctaa atgacaggat gcaggcgact tgagacacaa aaagagaagc gttcctctcg
      121 gatccaggca ttgcctcgct gctttctttt ctccaagacg ggctgaggat tgtacagctc
      181 taggcggagt tggggctctt cggatcgctt agattctcct ctttgctgca tttcccccca
      241 cgtcctcgtt ctcccgcgtc tgcctgcgga cccggagaag ggagaatgga gagggggctg
      301 ccgctcctct gcgccgtgct cgccctcgtc ctcgccccgg ccggcgcttt tcgcaacgat
      361 aaatgtggcg atactataaa aattgaaagc cccgggtacc ttacatctcc tggttatcct
      421 cattcttatc acccaagtga aaaatgcgaa tggctgattc aggctccgga cccataccag
      481 agaattatga tcaacttcaa ccctcacttc gatttggagg acagagactg caagtatgac
      541 tacgtggaag tcttcgatgg agaaaatgaa aatggacatt ttaggggaaa gttctgtgga
      601 aagatagccc ctcctcctgt tgtgtcttca gggccatttc tttttatcaa atttgtctct
      661 gactacgaaa cacatggtgc aggattttcc atacgttatg aaattttcaa gagaggtcct
      721 gaatgttccc agaactacac aacacctagt ggagtgataa agtcccccgg attccctgaa
      781 aaatatccca acagccttga atgcacttat attgtctttg tgccaaagat gtcagagatt
      841 atcctggaat ttgaaagctt tgacctggag cctgactcaa atcctccagg ggggatgttc
      901 tgtcgctacg accggctaga aatctgggat ggattccctg atgttggccc tcacattggg
      961 cgttactgtg gacagaaaac accaggtcga atccgatcct catcgggcat tctctccatg
     1021 gttttttaca ccgacagcgc gatagcaaaa gaaggtttct cagcaaacta cagtgtcttg
     1081 cagagcagtg tctcagaaga tttcaaatgt atggaagctc tgggcatgga atcaggagaa
     1141 attcattctg accagatcac agcttcttcc cagtatagca ccaactggtc tgcagagcgc
     1201 tcccgcctga actaccctga gaatgggtgg actcccggag aggattccta ccgagagtgg
     1261 atacaggtag acttgggcct tctgcgcttt gtcacggctg tcgggacaca gggcgccatt
     1321 tcaaaagaaa ccaagaagaa atattatgtc aagacttaca agatcgacgt tagctccaac
     1381 ggggaagact ggatcaccat aaaagaagga aacaaacctg ttctctttca gggaaacacc
     1441 aaccccacag atgttgtggt tgcagtattc cccaaaccac tgataactcg atttgtccga
     1501 atcaagcctg caacttggga aactggcata tctatgagat ttgaagtata cggttgcaag
     1561 ataacagatt atccttgctc tggaatgttg ggtatggtgt ctggacttat ttctgactcc
     1621 cagatcacat catccaacca aggggacaga aactggatgc ctgaaaacat ccgcctggta
     1681 accagtcgct ctggctgggc acttccaccc gcacctcatt cctacatcaa tgagtggctc
     1741 caaatagacc tgggggagga gaagatcgtg aggggcatca tcattcaggg tgggaagcac
     1801 cgagagaaca aggtgttcat gaggaagttc aagatcgggt acagcaacaa cggctcggac
     1861 tggaagatga tcatggatga cagcaaacgc aaggcgaagt cttttgaggg caacaacaac
     1921 tatgatacac ctgagctgcg gacttttcca gctctctcca cgcgattcat caggatctac
     1981 cccgagagag ccactcatgg cggactgggg ctcagaatgg agctgctggg ctgtgaagtg
     2041 gaagccccta cagctggacc gaccactccc aacgggaact tggtggatga atgtgatgac
     2101 gaccaggcca actgccacag tggaacaggt ggcaccactg tgctggccac agaaaagccc
     2161 acggtcatag acagcaccat acaatcagag tttccaacat atggttttaa ctgtgaattt
     2221 ggctggggct ctcacaagac cttctgccac tgggaacatg acaatcacgt gcagctcaag
     2281 tggagtgtgt tgaccagcaa gacgggaccc attcaggatc acacagcagg agatggcaac
     2341 ttcatctatt cccaagctga cgaaaatcag aagggcaaag tggctcgcct ggtgagccct
     2401 gtggtttatt cccagaactc tgcccactgc atgaccttct ggtatcacat gtctgggtcc
     2461 cacgtcggca cactcagggt caaactgcgc taccagaagc cagaggagta cgatcagctg
     2521 gtctggatgg ccattggaca ccaaggtgac cactggaagg aagggcgtgt cttgctccac
     2581 aagtctctga aactttatca ggtgattttc gagggcgaaa tcggaaaagg aaaccttggt
     2641 gggattgctg tggatgacat tagtattaat aaccacattt cacaagaaga ttgtgcaagg
     2701 agcacgccag gatacgaagg tgaaggagaa ggtgacaaga acatctccag gaagccaggc
     2761 aatgtgttga agaccttaga ccccatcctc atcaccatca tagccatgag tgccctgggg
     2821 gtcctcctgg gggctgtctg tggggtcgtg ctgtactgtg cctgttggca taatgggatg
     2881 tcagaaagaa acttgtctgc cctggagaac tataactttg aacttgtgga tggtgtgaag
     2941 ttgaaaaaag acaaactgaa tacacagagt acttattcgg aggcatgaag gcagacagag
     3001 atgaaaagac agtcaaagga cggaagtgga aggacgggag tgagctgggg agctgttgat
     3061 ctttcactat acaggctggg aagtgtgttg atgaccactg agccaggctt ttctcaggag
     3121 cttcaatgag tatggccgac agacatggac aaggagctgt gttcaccatc ggactcatgt
     3181 gcagtcagct tttttcctgt tggtttcatt tgaataatca gatgctggtg ttgagaccaa
     3241 gtatgattga cataatcatt catttcgacc cctcctgccc ctctctctct ctctcctctc
     3301 ccctttgtgg attctttttg gaaactgagc gaaatccaag atgctggcac caagcgtatt
     3361 ccgtgtggcc ctttggatgg acatgctacc tgaaacccag tgcccagaat atactagaat
     3421 caccgcattt cagtggactc ctgaagttgt acttgtgtat aattgcccgc gtcgtgcata
     3481 ggcaaagaag gattaggctg ttttcttttt aaagtactgt agcctcagta ctggtgtagt
     3541 gtgtcagctc tgtttacgaa gcaatactgt ccagttttct tgctgttttt ccggtgttgt
     3601 actaaacctc gtgcttgtga actccataca gaaaacggtg ccatccctga acacggctgg
     3661 ccactgggta tactgctgac aaccgcaaca acaaaaacac aaatccttgg cactggctag
     3721 tctatgtcct ctcaagtgcc tttttgtttg tactggttca ttgtgttaca ttaacgaccc
     3781 actctgcttc ttgctggtga aagccctgct ctttaatcaa actctggtgg cccactgact
     3841 aagaagaaag tttattttcg tgtgagatgc cagcccctcc gggcaggcaa gggctctgaa
     3901 gatttggcaa cgtggcttaa ttgttctgct ttttctgtag ttcaatttca tgtttcttga
     3961 cccttttgta taaagctaca atattctctc ttattgttct ttcatatgga atgtattttc
     4021 aaatgtaaac tctcttctct ttctctctcc tatctctctg tcttttttct ctcttagaat
     4081 tggaggattt gccattgtcc aggaaagaaa cttgcagctt taacctgctg ggaatggcaa
     4141 acgattttac tagactttat gtttaaaaat aaataaataa gggaaattcc taactttgcc
     4201 ctccaaagtc taactttggt tttcttgtta actggttaaa gtgacagtat cttttttcct
     4261 tatctattct attcaaaatg acctttgata gaaatgttgg catttagtag aaatagtgat
     4321 aagttgagga aagaaataat acaaattggc tttcaagtga gacccaaagg aagaactgga
     4381 taaaatcttc caaatccaaa agcatgagat ttttctatcc aaatatgcaa aaatgaccca
     4441 agagaacttt cttattttgc tactgagtca cacaagggaa gtggaaggaa gaacagttaa
     4501 tttaagaatg aaactataaa tcctgatgcc tgggggtcaa gtattttaag ataagagggg
     4561 gaaaaacaca taaagtcaaa caaatgtttt aaaaattcat aacagcaacc ttgaaaaaat
     4621 agacttaaat gaatgcttct agaaacttcc agcggctcac aaagaataag cctgccttag
     4681 ggctggcaac atctaagcct ctaacagcac agggaagcaa atatcttacc aggcagccta
     4741 tgaattaacc caaagaagct ttggttggtt ttggtggatt tttatcatgc catgttggac
     4801 atgagatttt ttagatcttc cttcccacat tgctagacgt ctcactcaaa gacatttgtt
     4861 gggagtcaca tttgcatcat agacgagaca gtccattcat cttagttaaa ttggattgag
     4921 aatgcctttt gtttccagga aaatattgat caccatgaaa gaagaatagt tttttgtccc
     4981 cagagacatt catttagttg atataatcct accagaagga aagcactaag aaacactcgt
     5041 ttgttgtttt taaaggcaac agacttaaag ttgtcctcag ccaaggaaaa atgatactgc
     5101 aactttaaaa tttaaagtat cttgcactga taaatatatt taaaaattat atgtttataa
     5161 agttattaat ttgtaaaggc agtgttacaa aatgttcagt ttatattgtt ttagattgtt
     5221 ttgtaatttt taaaggtgta aaataacata ttttttcttt atggaaatct ataaaacttt
     5281 ctgtagtaaa atgttttcat tttactggta tattattgct tcatgttttg taccatcata
     5341 agattttgtg cagatttttt ttacagaaat tattattttc tatgacaata tgacacttgt
     5401 aaattgttgt ttcaaaatga acagcgaagc cttaacttta aatgacattt gtattctcag
     5461 acactgagta gcataaaaac cacatagaac tgaactgtaa cttaaattcc aaactatgac
     5521 tactacattc caaagaaaca gttgaattaa acattttcat aaaatatccc a
//
