LOCUS       NM_001310136            1537 bp    mRNA    linear   PRI 15-FEB-2024
DEFINITION  Homo sapiens nuclear pore complex interacting protein family member
            B8 (NPIPB8), transcript variant 1, mRNA.
ACCESSION   NM_001310136 XM_017023624
VERSION     NM_001310136.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Martin,J., Han,C., Gordon,L.A., Terry,A., Prabhakar,S., She,X.,
            Xie,G., Hellsten,U., Chan,Y.M., Altherr,M., Couronne,O., Aerts,A.,
            Bajorek,E., Black,S., Blumer,H., Branscomb,E., Brown,N.C.,
            Bruno,W.J., Buckingham,J.M., Callen,D.F., Campbell,C.S.,
            Campbell,M.L., Campbell,E.W., Caoile,C., Challacombe,J.F.,
            Chasteen,L.A., Chertkov,O., Chi,H.C., Christensen,M., Clark,L.M.,
            Cohn,J.D., Denys,M., Detter,J.C., Dickson,M.,
            Dimitrijevic-Bussod,M., Escobar,J., Fawcett,J.J., Flowers,D.,
            Fotopulos,D., Glavina,T., Gomez,M., Gonzales,E., Goodstein,D.,
            Goodwin,L.A., Grady,D.L., Grigoriev,I., Groza,M., Hammon,N.,
            Hawkins,T., Haydu,L., Hildebrand,C.E., Huang,W., Israni,S.,
            Jett,J., Jewett,P.B., Kadner,K., Kimball,H., Kobayashi,A.,
            Krawczyk,M.C., Leyba,T., Longmire,J.L., Lopez,F., Lou,Y., Lowry,S.,
            Ludeman,T., Manohar,C.F., Mark,G.A., McMurray,K.L., Meincke,L.J.,
            Morgan,J., Moyzis,R.K., Mundt,M.O., Munk,A.C., Nandkeshwar,R.D.,
            Pitluck,S., Pollard,M., Predki,P., Parson-Quintana,B., Ramirez,L.,
            Rash,S., Retterer,J., Ricke,D.O., Robinson,D.L., Rodriguez,A.,
            Salamov,A., Saunders,E.H., Scott,D., Shough,T., Stallings,R.L.,
            Stalvey,M., Sutherland,R.D., Tapia,R., Tesmer,J.G., Thayer,N.,
            Thompson,L.S., Tice,H., Torney,D.C., Tran-Gyamfi,M., Tsai,M.,
            Ulanovsky,L.E., Ustaszewska,A., Vo,N., White,P.S., Williams,A.L.,
            Wills,P.L., Wu,J.R., Wu,K., Yang,J., Dejong,P., Bruce,D.,
            Doggett,N.A., Deaven,L., Schmutz,J., Grimwood,J., Richardson,P.,
            Rokhsar,D.S., Eichler,E.E., Gilna,P., Lucas,S.M., Myers,R.M.,
            Rubin,E.M. and Pennacchio,L.A.
  TITLE     The sequence and analysis of duplication-rich human chromosome 16
  JOURNAL   Nature 432 (7020), 988-994 (2004)
   PUBMED   15616553
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC020765.8 and AC145285.2.
            
            On or before Jul 30, 2020 this sequence version replaced
            XM_017023624.1, NM_001310136.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR5189667.304896.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA1968968, SAMEA2144120 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000683297.1/ ENSP00000507410.1
            RefSeq Select criteria :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                AC020765.8         176532-176617
            87-244              AC020765.8         176790-176947
            245-427             AC020765.8         186602-186784
            428-527             AC020765.8         190424-190523
            528-723             AC020765.8         190636-190831
            724-784             AC020765.8         194930-194990
            785-820             AC020765.8         195100-195135
            821-1537            AC145285.2         49804-50520
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p11.2"
     gene            1..1537
                     /gene="NPIPB8"
                     /note="nuclear pore complex interacting protein family
                     member B8"
                     /db_xref="GeneID:728734"
                     /db_xref="HGNC:HGNC:37490"
     exon            1..86
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            87..244
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..1423
                     /gene="NPIPB8"
                     /codon_start=1
                     /product="nuclear pore complex-interacting protein family
                     member B8"
                     /protein_id="NP_001297065.1"
                     /db_xref="CCDS:CCDS81963.1"
                     /db_xref="GeneID:728734"
                     /db_xref="HGNC:HGNC:37490"
                     /translation="MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINS
                     LAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRCYTFNILFCTSCLCV
                     SFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV
                     ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHK
                     CKIPPSARKPLCNWVRMAAAEHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITD
                     NSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPL
                     PPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQS
                     PKPKRQREAEAQQLPKPKRRRLSKLRTRHCTQAWAIRINP"
     exon            245..427
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            428..527
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            528..723
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            724..784
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            785..820
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
     exon            821..1537
                     /gene="NPIPB8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttataggta tgatctcatg aaaccttgag agaaactgaa tgacgaatga aactattgtt
       61 cctgtttcac acagaagaaa actgaggttg gcactcatca tgagcccctg ttctcattct
      121 gcaaatggtg aagctctcta ttgtcctgac cccacagttc ctgtcccatg accagggcca
      181 gctcaccaag gagctgcagc agcatgtaaa gtcagtgaca tgcccatgcg agtacctgag
      241 gaaggttatc aatagtctgg ctgtctatcg tcatcgtgag actgactttg gtgtaggagt
      301 tcgagaccac cctggccaac atggcaaaac cccatctcca caaaaattgg ataatttgat
      361 aattatcatt attgggtttc tgagatgtta cacatttaac attctcttct gcacaagttg
      421 cctttgtgtg tctttcctga agactatctt ctggtctcga aatggacatg atggatccat
      481 ggatgtacag cagagagcct ggaggtccaa ccgcagtaga cagaaagggc tgaggtccat
      541 ttgtatgcac acaaagaaaa gagtttcttc ctttcgagga aataaaattg gcctgaaaga
      601 cgtcattact ctacggaggc atgtggaaac aaaagttaga gctaaaatcc gtaagaggaa
      661 ggtgacaacg aaaatcaacc gtcatgacaa aatcaatgga aagaggaaga ccgccagaaa
      721 acagaaaatg tttcaacgtg cgcaagagtt gcggcggcgg gcagaggact accacaaatg
      781 caaaatcccc ccttctgcaa gaaagcctct ttgcaactgg gtcagaatgg cggcagcgga
      841 gcatcgtcat tcttcaggat tgccctactg gctctacctc acagctgaaa ctttaaaaaa
      901 caggatgggc cgccagccac ctcctccaac tcaacaacat tctataactg ataactccct
      961 gagcctcaag acacctcctg agtgtctgct cactcccctt ccaccctcag tggatgataa
     1021 tatcaaggag tgtcctcttg ctcctcttcc accctctcct cttccaccct cagtggatga
     1081 taatctgaag gaatgtctct ttgtcccgct tccaccctct cctcttccac cctcagtgga
     1141 tgataatctg aaggaatgtc tctttgtccc gcttccaccc tctcctcttc caccctcagt
     1201 ggatgataat ctcaagactc ctcccttagc tactcaggag gccgaggtgg aaaaaccacc
     1261 caaacccaag aggtggaggg tggatgaggt ggaacaatcg cccaagccca agaggcagag
     1321 ggaggccgag gcacaacaat tacccaaacc caagaggcgg aggttgagta agctgagaac
     1381 acgccattgc actcaagcct gggcaataag aataaatccg taggtcgaaa aaaagaaaaa
     1441 aatcaaaaaa caaaacaaaa cccacgctcc aaaaacaaac taacgaagaa taaataaata
     1501 atataaaaat aaaataaata ctgcagtcct tatgtta
//
