LOCUS       NM_001395275            1892 bp    mRNA    linear   PRI 12-JUN-2024
DEFINITION  Homo sapiens nuclear pore complex interacting protein family member
            B6 (NPIPB6), mRNA.
ACCESSION   NM_001395275
VERSION     NM_001395275.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138894.2 and AC138904.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA2148093,
                              SAMEA2148874 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000695563.1/ ENSP00000512020.1
            RefSeq Select criteria :: based on manual assertion
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-486               AC138894.2         166476-166961
            487-644             AC138894.2         167124-167281
            645-827             AC138904.3         171283-171465       c
            828-927             AC138904.3         167546-167645       c
            928-1123            AC138904.3         167238-167433       c
            1124-1184           AC138904.3         163097-163157       c
            1185-1220           AC138904.3         162952-162987       c
            1221-1892           AC138904.3         160921-161592       c
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p12.1"
     gene            1..1892
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /note="nuclear pore complex interacting protein family
                     member B6"
                     /db_xref="GeneID:728741"
                     /db_xref="HGNC:HGNC:37454"
     exon            1..486
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            487..644
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     CDS             525..1802
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /note="nuclear pore complex-interacting protein B type"
                     /codon_start=1
                     /product="nuclear pore complex-interacting protein family
                     member B6"
                     /protein_id="NP_001382204.1"
                     /db_xref="CCDS:CCDS61892.1"
                     /db_xref="GeneID:728741"
                     /db_xref="HGNC:HGNC:37454"
                     /translation="MVKLSIVLTPQFLSHDQSQLTKELQQHVKSVTCPCEYLRKVINS
                     LAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCV
                     SFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV
                     ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHK
                     CKIPPSARKPLCNWVRMVAAEHRHSSGLPYWPYLTAETLKNRMGRQPPPPTQQHSITD
                     NSLSLKTPTECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPL
                     PPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRRRVDEVEQSPKPKRQR
                     EAEAQQLPKPKRRRLSKLRTRHCTQAWAIRINP"
     exon            645..827
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            828..927
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            928..1123
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            1124..1184
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1220
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1892
                     /gene="NPIPB6"
                     /gene_synonym="NPIPB"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgccaaat cattcacccc tcaccacaac cgaatgagct aaggattctc attatatata
       61 gtttatggag agggaagtgc agacataaag aggtgaattg tcttacccag atcacacagc
      121 tgataagtgg tggaggcaga atagaatcta aacagtgtgg ctccggagcc cacatgcatt
      181 gattcgacaa gtgtttattg agcacctgcc acggacaagg ccttgtgtga ttaaataggg
      241 ttataattag taatataaaa atgagaaatc actaatgctt tttagactta acattttctt
      301 tttttgtagg tttcaggcac agaactgtat atccaataat agtgaaatgg atcccactaa
      361 ttatgacaga aatgatgata catttaaatg acttggatgt tttataggta tgatctcgtg
      421 aaaccttgag agaaactgaa tgacgaatga aactattgtt cctgtttcac acagaagaaa
      481 actgaggttg gcactcatga tgagcccctg ttctcattct gcaaatggtg aagctctcta
      541 ttgtcctgac cccacagttc ctgtcgcatg accagagcca gctcaccaag gagctgcagc
      601 agcatgtaaa gtcagtgaca tgcccatgcg agtacctgag gaaggttatc aatagtctgg
      661 ctgtctatcg tcatcgtgag actgactttg gtgtaggagt tcgagaccac cctggccaac
      721 atggcaaaac cccatctcca caaaaattgg ataatttgat aattatcatt attgggtttc
      781 tgagacgtta cacatttaac attctcttct gcacaagttg cctttgtgtg tctttcctga
      841 agactatctt ctggtctcga aatggacatg atggatccat ggatgtacag cagagagcct
      901 ggaggtccaa ccgcagtaga cagaaagggc tgaggtccat ttgtatgcac acaaagaaaa
      961 gagtttcttc ctttcgagga aataaaattg gcctgaaaga cgtcattact ctacggaggc
     1021 atgtggaaac aaaagttaga gctaaaatcc gtaagaggaa ggtgacaacg aaaatcaacc
     1081 gtcatgacaa aatcaatgga aagaggaaga ccgccagaaa acagaaaatg tttcaacgtg
     1141 cgcaagagtt gcggcggcgg gcagaggact accacaaatg caaaatcccc ccttctgcaa
     1201 gaaagcctct ttgcaactgg gtcagaatgg tggcagcgga gcatcgtcat tcttcaggat
     1261 tgccctactg gccctacctc acagctgaaa ctttaaaaaa caggatgggc cgccagccac
     1321 ctcctccaac tcaacaacat tctataactg ataactccct gagcctcaag acacctactg
     1381 agtgtctgct cactcccctt ccaccctcag tggatgataa tatcaaggag tgtcctcttg
     1441 ctcctcttcc accctctcct cttccaccct cagtggatga taatctgaag gaatgtctct
     1501 ttgtcccgct tccaccctct cctcttccac cctcagtgga tgataatctc aagactcctc
     1561 ccttagctac tcaggaggcc gaggtggaaa aaccacccaa acccaagagg tggagggtgg
     1621 atgaggtgga acaatcaccg aaacccaaga ggcggagggt ggatgaggtg gaacaatcgc
     1681 ccaagcccaa gaggcagagg gaggccgagg cacaacaatt acccaaaccc aagaggcgga
     1741 ggttgagtaa gctgagaaca cgccattgca ctcaagcctg ggcaataaga ataaatccgt
     1801 aggtcgaaaa aaagaaaaaa atcaaaaaac aaaacaaaac ccacgctcca aaaacaaact
     1861 aacgaagaat aaataaataa tataaaaata aa
//
