LOCUS       NM_001306094            2430 bp    mRNA    linear   PRI 17-FEB-2024
DEFINITION  Homo sapiens nuclear pore complex interacting protein family member
            B15 (NPIPB15), transcript variant 2, mRNA.
ACCESSION   NM_001306094 XM_011508676 XM_011523497 XM_011523498
VERSION     NM_001306094.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Loftus,B.J., Kim,U.J., Sneddon,V.P., Kalush,F., Brandon,R.,
            Fuhrmann,J., Mason,T., Crosby,M.L., Barnstead,M., Cronin,L.,
            Deslattes Mays,A., Cao,Y., Xu,R.X., Kang,H.L., Mitchell,S.,
            Eichler,E.E., Harris,P.C., Venter,J.C. and Adams,M.D.
  TITLE     Genome duplications and other features in 12 Mb of DNA sequence
            from human chromosome 16p and 16q
  JOURNAL   Genomics 60 (3), 295-308 (1999)
   PUBMED   10493829
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC009053.7.
            
            On or before Jan 25, 2021 this sequence version replaced
            XM_011523498.3, NM_001306094.1.
            
            CCDS Note: This gene lacks full-length transcript support, and thus
            the exon combination of this CCDS representation is inferred based
            on paralogous transcript alignments and RNA-seq data.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000692376.1/ ENSP00000508772.1
            RefSeq Select criteria    :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1041              AC009053.7         86963-88003         c
            1042-1129           AC009053.7         86270-86357         c
            1130-1312           AC009053.7         82611-82793         c
            1313-1412           AC009053.7         78868-78967         c
            1413-1608           AC009053.7         78560-78755         c
            1609-1669           AC009053.7         74424-74484         c
            1670-1705           AC009053.7         74279-74314         c
            1706-2430           AC009053.7         72194-72918         c
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16q23.1"
     gene            1..2430
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /note="nuclear pore complex interacting protein family
                     member B15"
                     /db_xref="GeneID:440348"
                     /db_xref="HGNC:HGNC:34409"
     exon            1..1041
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..1129
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     CDS             1064..2395
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; nuclear pore complex interacting protein-like
                     2"
                     /codon_start=1
                     /product="nuclear pore complex-interacting protein family
                     member B15 isoform 2 precursor"
                     /protein_id="NP_001293023.1"
                     /db_xref="CCDS:CCDS76897.1"
                     /db_xref="GeneID:440348"
                     /db_xref="HGNC:HGNC:34409"
                     /translation="MRLRFWLLIWLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDH
                     PGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTD
                     VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKR
                     KVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMA
                     AAEHRHSSGLPCWPYLTAEALKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLHPLPP
                     SVDDNIKECPLAPLPPSVDDNLKEYLLVPLPPSPLPPSVDDNLKDCLFVPLPPSPLPP
                     SVDDNLKTPPLATQEAEAEKPPKPKRWRVDEVEQSPKPKRRRADEVEQSPKPKRQREA
                     EAQQLPKPKRRRLSKLRTRHCTQAWAIRINPWVEKKKKIKKQNKTHAPKTN"
     exon            1130..1312
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1412
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1413..1608
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1609..1669
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1670..1705
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
     exon            1706..2430
                     /gene="NPIPB15"
                     /gene_synonym="A-761H5.4; NPIPL2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggcctgag tgagtttggg cacactctgt gtgatcgggc agaaggcctg tgggaagttc
       61 agctgaggac agggccagga aaggtgatgg acagtggggg tctgtcctgg tcaccagacc
      121 cctgggtcct gcccacctgc ttggagctcc ccacccatca cacatgatgc tgccaagccc
      181 tctgggtatt gtgggcaaat accttaggag agaagctgat gaactttgtt tcttgaaatg
      241 cacagattcc ttggacgtcc ctgagaggtc aatgatgaag gtcaacttgg ttttctcccc
      301 ctcatttggg ttcagaattt aaagtccaca cacacaggca gtaagatgat tatagataag
      361 gacatcatca ctcggtttca gatgttaaaa tgtctaggtg ggttaggggt gatttgagat
      421 cacacaacct tgtgccacaa agaggaattc ccaggccagg gggagacatt ttattgccat
      481 gttatgatct catcattgag ttgaaaggca atcttgtttc attttggatt ctttcttatg
      541 tttatgtctt ataagggcac tttgaatttc caagcaaata ataattttga attagctttt
      601 aatcattgac ttctagcaca gttatatgat cagaaacatg ctgtgtgatt tgattgctct
      661 caaatatatt gagatttgct ggaacaaaat aagtcaggtt aatttttgta aatgtaccat
      721 gcatgcttaa aatgaatgta tctacatttg ttcctgagat acaggttgat ggacggatgg
      781 ctacatggat gtgatggaga tggtttacta tcgggacctt ccgcatcctg ctgatgtttt
      841 gttgcttagg atatgaatgg ctgagcggag gctgtaaaac ctggcactct gcttgggtat
      901 gaagttcttc ctgccatcct gccatcattt gttttttatg ttttgtcgcc aaaagtgacc
      961 ttgaggaacc ctgggagctc aggaaggaag gagagcccag aagcagggac agggagctgg
     1021 ttggggagga ccagaaatca gggcgccctg aaaggaccag gacatgcggc tgcgcttttg
     1081 gctcctcatt tggctcctgc tgggatttat cagccatcag cccacccctg tcatcaatag
     1141 tctggctgtc tatcgtcatc gtgagactga ctttggtgta ggagttcgag accaccctgg
     1201 ccaacatggc aaaaccccat ctccacaaaa attggataat ttgataatta tcattattgg
     1261 gtttctgaga cgtgacacat ttaccattct cttctgcaca agttaccttt gtgtgtcttt
     1321 cctgaagact atcttctggt ctcgaaatgg acatgatgga tccacggatg tacagcagag
     1381 agcctggagg tccaaccgca gtagacagaa agggctgagg tccatttgta tgcacacaaa
     1441 gaaaagagtt tcttcctttc gaggaaataa aattggcctg aaagacgtca ttactctacg
     1501 gaggcatgtg gaaacaaaag ttagagctaa aatccgtaag aggaaggtga caacgaaaat
     1561 caaccgtcat gacaaaatca atggaaagag gaagaccgcc agaaaacaga aaatgtttca
     1621 acgtgcgcaa gagttgcggc ggcgggcaga ggactaccac aaatgcaaaa tccccccttc
     1681 tgcaagaaag cctctttgca actgggtcag aatggcggca gcggagcatc gtcattcttc
     1741 aggattgccc tgctggccct acctcacagc tgaagcttta aaaaacagga tgggccgcca
     1801 gccacctcct ccaactcaac aacattctat aactgataac tccctgagcc tcaagacacc
     1861 tcccgaatgt ctccttcatc cccttccacc ctcagtggat gataatatca aggagtgtcc
     1921 tcttgctcct cttccaccct cagtggatga taatctgaag gagtatctcc tggtccctct
     1981 tccaccctct cctcttccac cctcagtgga tgataatctg aaggactgtc tctttgtccc
     2041 tcttccaccc tctcctcttc caccctcagt ggatgataat ctcaagactc ctcccttagc
     2101 tactcaggag gccgaggcgg aaaaaccacc caaacccaag aggtggaggg tggatgaggt
     2161 ggaacaatca ccgaaaccca agaggcggag ggcggatgag gtggaacaat cgcccaagcc
     2221 caagaggcag agggaggccg aggcacaaca attacccaaa cccaagaggc ggaggttgag
     2281 taagctgaga acacgccatt gcactcaagc ctgggcaata agaataaatc cgtgggtcga
     2341 aaaaaagaaa aaaatcaaaa aacaaaacaa aacccacgct ccaaaaacaa actaacgaag
     2401 aataaataaa taatataaaa ataaaataaa
//
