LOCUS       NM_001310137            6369 bp    mRNA    linear   PRI 17-FEB-2024
DEFINITION  Homo sapiens nuclear pore complex interacting protein family member
            B11 (NPIPB11), mRNA.
ACCESSION   NM_001310137
VERSION     NM_001310137.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6369)
  AUTHORS   Martin,J., Han,C., Gordon,L.A., Terry,A., Prabhakar,S., She,X.,
            Xie,G., Hellsten,U., Chan,Y.M., Altherr,M., Couronne,O., Aerts,A.,
            Bajorek,E., Black,S., Blumer,H., Branscomb,E., Brown,N.C.,
            Bruno,W.J., Buckingham,J.M., Callen,D.F., Campbell,C.S.,
            Campbell,M.L., Campbell,E.W., Caoile,C., Challacombe,J.F.,
            Chasteen,L.A., Chertkov,O., Chi,H.C., Christensen,M., Clark,L.M.,
            Cohn,J.D., Denys,M., Detter,J.C., Dickson,M.,
            Dimitrijevic-Bussod,M., Escobar,J., Fawcett,J.J., Flowers,D.,
            Fotopulos,D., Glavina,T., Gomez,M., Gonzales,E., Goodstein,D.,
            Goodwin,L.A., Grady,D.L., Grigoriev,I., Groza,M., Hammon,N.,
            Hawkins,T., Haydu,L., Hildebrand,C.E., Huang,W., Israni,S.,
            Jett,J., Jewett,P.B., Kadner,K., Kimball,H., Kobayashi,A.,
            Krawczyk,M.C., Leyba,T., Longmire,J.L., Lopez,F., Lou,Y., Lowry,S.,
            Ludeman,T., Manohar,C.F., Mark,G.A., McMurray,K.L., Meincke,L.J.,
            Morgan,J., Moyzis,R.K., Mundt,M.O., Munk,A.C., Nandkeshwar,R.D.,
            Pitluck,S., Pollard,M., Predki,P., Parson-Quintana,B., Ramirez,L.,
            Rash,S., Retterer,J., Ricke,D.O., Robinson,D.L., Rodriguez,A.,
            Salamov,A., Saunders,E.H., Scott,D., Shough,T., Stallings,R.L.,
            Stalvey,M., Sutherland,R.D., Tapia,R., Tesmer,J.G., Thayer,N.,
            Thompson,L.S., Tice,H., Torney,D.C., Tran-Gyamfi,M., Tsai,M.,
            Ulanovsky,L.E., Ustaszewska,A., Vo,N., White,P.S., Williams,A.L.,
            Wills,P.L., Wu,J.R., Wu,K., Yang,J., Dejong,P., Bruce,D.,
            Doggett,N.A., Deaven,L., Schmutz,J., Grimwood,J., Richardson,P.,
            Rokhsar,D.S., Eichler,E.E., Gilna,P., Lucas,S.M., Myers,R.M.,
            Rubin,E.M. and Pennacchio,L.A.
  TITLE     The sequence and analysis of duplication-rich human chromosome 16
  JOURNAL   Nature 432 (7020), 988-994 (2004)
   PUBMED   15616553
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC025279.6.
            
            On Oct 17, 2021 this sequence version replaced NM_001310137.4.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1966682,
                              SAMEA2142586 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000698511.1/ ENSP00000513761.1
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2709              AC025279.6         141377-144085       c
            2710-2867           AC025279.6         141057-141214       c
            2868-2996           AC025279.6         131322-131450       c
            2997-3096           AC025279.6         127623-127722       c
            3097-3292           AC025279.6         127315-127510       c
            3293-3353           AC025279.6         123169-123229       c
            3354-3389           AC025279.6         123024-123059       c
            3390-6369           AC025279.6         118684-121663       c
FEATURES             Location/Qualifiers
     source          1..6369
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p11.2"
     gene            1..6369
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /note="nuclear pore complex interacting protein family
                     member B11"
                     /db_xref="GeneID:728888"
                     /db_xref="HGNC:HGNC:37453"
     exon            1..2709
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            2710..2867
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     CDS             2748..6233
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /note="hepatitis B virus pre-pre-S promoter DNA-binding
                     protein; pps22-1 protein; NPIP-like locus"
                     /codon_start=1
                     /product="nuclear pore complex-interacting protein family
                     member B11"
                     /protein_id="NP_001297066.2"
                     /db_xref="CCDS:CCDS92131.1"
                     /db_xref="GeneID:728888"
                     /db_xref="HGNC:HGNC:37453"
                     /translation="MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINT
                     LADHHHRGTDFGGSPWLHIIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTD
                     VQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKR
                     KVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMA
                     AAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHCITDNSLSLKTPLECLLTPLPP
                     SADDNLKTPPECLLTPLPPSADDNLKTPPECLLTPLPPSAPPSAPPSADDNLKTRAEC
                     LLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAERLRGPLPPSADDNLKTP
                     SERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSA
                     DDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLP
                     PSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLT
                     PLPPSAPPSADDNIKTPAEHLQFRFHPQRMIISRDLPSVSSLPFHPQLHPQQMIISRY
                     LLSICGFRFHRQRMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQPMII
                     SRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQPMIISRHLPSVSSLPFHPQL
                     HPQQMIISRHLPSVCGGRFHPQPMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCG
                     GRFHPQPMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQPMIISRHLPS
                     VSSLPFHPQLHPQQMIISRHLPSVCGERLWVPLPPSADDNLKTPSKRQLTPLPPSAPP
                     SADDNIKTPAERLRGPLPPSADDNLKTPSKRQLTPLPPSAPPSADDNIKTPAERLRGP
                     LPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQ
                     LTPLPPSAPTSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRA
                     AEMEPPPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPSRKPKRRRAA
                     DVEPSSPEPKRRRLS"
     exon            2868..2996
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            2997..3096
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            3097..3292
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            3293..3353
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            3354..3389
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
     exon            3390..6369
                     /gene="NPIPB11"
                     /gene_synonym="NPIP"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttagattct acctctgtca cccaggcggg agtgcagtgg catgatctcg gctcactgca
       61 acctccgcct cctgggttca agcaattctc ctgtctcagc ctcccgagta gctgagacta
      121 caggcatgtg ccaccaggca tggctaattt ttgtattttt agtggagaca gggtttcact
      181 ctattaggct ggtctggaac tcccgacctc aggtgatcca cctgcctttg tctcccaaag
      241 tgctgggatt acaggcatga gtgacggtgc ccagccattc atgacgtgtt tatacaaata
      301 taactttagc aaacatttag cataactatc aaaattacaa atcatattaa atttgtataa
      361 atgtatgcaa tttttggaac acgtatatca acaacatacc cataaatata actgagatga
      421 gatctaatgt cacctcactt gacagtgccc tcccatgcag tatcgccaca tttgacaatg
      481 cctgcccatt taatctacca aataaatcga atcacttaat acctctacaa gatgagagat
      541 acattcttta gactccccaa gggatgcagc tgaaaaaatc ccaaagttag ttttaagcca
      601 aaaagacttg atttaggatt ttgacactgg agaaacccat caaagacgtc aagtttgaaa
      661 acacttgatc aaaacagaat cacaggtcac tattaaaaga gtattaattt aaccagagac
      721 ttccaaagca atacagaaac ttacatggat ataaaaacct taaccctttt aaaggtcaga
      781 tttgctaagt gatcaaaagg ggtacttgaa ttgaatcgac acaggaagag tgtgtacagg
      841 gttatgagtg taggcagatg gttactttgg tcatatctcc atttgccacc tgattacaca
      901 tgagaatgcc atctttactc accagaaagc cagtattata ggaggtgtag gaggcattct
      961 tggacttgaa acaagaacat tgttgtgtag aaatttcatt gactgtgtta aaattattct
     1021 ccatgggctg gagaacacat aacatggcct ttagaatgag acgggcattg attggatgca
     1081 aggtctccac acttactagc cgtgtgacat tggacagagt gcttcatcat tccgagactc
     1141 agtttttaaa ggaaaaacaa ctaactacct tgcaagcttg ctagcaggtt taagtgtaat
     1201 aatgtgtggg aatgactgca ccgtgactaa cacgtggtga cggcttaatt aatgttaacc
     1261 cttatcatta tcgtataaga atgtgagttg cataagagag gaatcctgtc agtttgttct
     1321 ctgctgtgtc cccaagacca tgaatcatgg ctggcacgta gtaggctttt aataatattt
     1381 gttcaacaag tatttggcag tcttggaggg cagaaaagga ggtggggaag atttttaaat
     1441 aacatttttt aaaaagtcac attgtcctac aatatcgatt tttcttgcat atttaggaaa
     1501 ttgagggttt tttcctaaaa catgcggaca tatgggaaat atgatgcaac atttgcacta
     1561 atgtttcaga cacagttaga ggtttccaag agattttgtg ctggggaggc tgcttgctac
     1621 aagctcccaa agctctggga ggacatagta ttcattcctc cctcagcaga agcggtgagg
     1681 caagaagctc tggggagcac ccagccttgg acttttagca tagtgtgtca ggtcttcata
     1741 gtttgggccc agggcacaga gaagtcacag ctctctggca tcctgtgacc tttaccctct
     1801 ttgccaaggg aaaatgtggc ccaccaaagc aagaaacttg agggcatggg tcaccccagc
     1861 cctggcatct gcccagagcc cgagaaggaa ggaacaatga tcctccagct acctcacagg
     1921 gctggcacag gtgaccactg ccctggcatc acccagctgt gtccggcagc ctgaacccca
     1981 tctgtgggga tgcgaggagg aaaatacaaa agcccttagg tgagcactga gaaggcagat
     2041 gcagcagaaa cctccaggcc ggaactaccc agtcttggac ctatggtgga gacagagcat
     2101 agctggcgat catgtgtact tacactctaa ggtcacctgg ttgcactgtg gcctcatctg
     2161 tggctctgaa aatgaagatt tggaaggaga tcatcacagc taatgtttaa caagcccctc
     2221 ctgtgtgcca aatcattcac ccctcaccac aaccgaatga gctaaggatt ctcattatat
     2281 atagtttatg gagagggaag tgcagacata aagaggtgaa ttatcttacc cagatcacac
     2341 agctgataag tggtggaggc agaatagaat ctaaacagtg tggctccgga gcccacatgc
     2401 attgattcga caagtgttta ttgagcacct gccacggaca aggccttgtg tgattaaata
     2461 gggttataat tagtaatata aaaatgagaa atcactaatg ctttttagac ttaacatttt
     2521 ctttttttgt aggtttcagg cacagaactg tatatccaat aatagtgaaa tggatcccac
     2581 taattatgac agaaatgatg atacatttaa atgacttgga tgttttatag gtatgatctc
     2641 gtgaaacctt gagagaaact gaatgacgaa tgaaactatt gttcctgttt cacacagaag
     2701 aaaactgagg ttggcactca tcatgagccc ctgttctcat tctgcaaatg gtgaagctct
     2761 ctattgtcct gaccccacag ttcctgtccc atgaccaggg ccagctcacc aaggagctgc
     2821 agcagcacgt aaagtcagtg acatgcccat gcgagtacct gaggaaggtt atcaatactc
     2881 tggctgacca tcatcatcgt gggactgact ttggtggaag tccttggtta catattatta
     2941 ttgcgtttcc gacaagttat aaagttgtca ttaccctctg gatagtttac ctttgggtgt
     3001 ctctcctgaa gactatcttc tggtctcgaa atggacatga tggatccacg gatgtacagc
     3061 agagagcctg gaggtccaac cgccgtagac aggaagggct gaggtccatt tgtatgcaca
     3121 caaagaaaag agtttcttcc tttcgaggaa ataaaattgg cctgaaagac gtcattactc
     3181 tacggaggca tgtggaaaca aaagttagag ctaaaatccg taagaggaag gtgacaacga
     3241 aaatcaaccg tcatgacaaa atcaatggaa agaggaagac cgccagaaaa cagaaaatgt
     3301 ttcaacgtgc gcaagagttg cggcggcggg cagaggacta ccacaaatgc aaaatccccc
     3361 cttctgcaag aaaggctctt tgcaactggg tcagaatggc ggcagcggag catcgtcatt
     3421 cttcaggatt gccctactgg ccctacctca cagctgaaac tttaaaaaac aggatgggcc
     3481 accagccacc tcctccaact caacaacatt gtataactga taactccctg agcctcaaga
     3541 cacctctcga gtgtctgctc actccccttc caccctcagc ggatgataat ctcaagacac
     3601 ctcccgagtg tctgctcact ccccttccac cctcagcgga tgataatctc aagacacctc
     3661 ccgagtgtct gctcactccc cttccaccct cagctccacc ctcagctcca ccctcagcgg
     3721 atgataatct caagacacgt gccgagtgtc tgctccatcc ccttccaccc tcagcggatg
     3781 ataatctcaa gacaccttcc gagcgtcagc tcactcccct tccaccctca gctccaccct
     3841 cagcagatga taatatcaag acaactgccg agcgtctgcg ggggccgctt ccaccctcag
     3901 cggatgataa tctcaagaca ccttctgagc gtcagctcac tccccttcca ccctcagctc
     3961 caccctcagc agatgataat atcaagacac ctgccgagca tctgcggggg ccgcttccac
     4021 cctcagcgga tgataatctc aagacacctt ctgagcgtca gctcactccc cttccaccct
     4081 cagctccacc ctcagcagat gataatatca agacacctgc cgagcgtctg cgggggccgc
     4141 ttccaccctc agccgatgat aatctcaaga caccttctga gcgtcagctc actccccttc
     4201 caccctcagc tccaccctca gcagatgata atatcaagac acctgccgag catctgcggg
     4261 ggccgcttcc accctcagcg gatgataatc tcaagacacc ttctgagcgt cagctcactc
     4321 cccttccacc ctcagctcca ccctcagcag atgataatat caagacaact gccgagcatc
     4381 tgcgggggcc gcttccaccc tcagcggatg ataatctcaa gacaccttcc gagcgtcagc
     4441 tcactcccct tccaccctca gctccaccct cagcagatga taatatcaag acacctgccg
     4501 agcatctgca gttccgcttc caccctcagc ggatgataat ctcaagagac cttccgagcg
     4561 tcagctcact ccccttccac cctcagctcc accctcagca gatgataata tcaagatacc
     4621 tgctgagcat ctgcgggttc cgcttccacc gtcagcggat gataatctca agacaccttc
     4681 cgagcgtcag ctcactcccc ttccaccctc agctccaccc tcagcagatg ataatatcaa
     4741 gacacctgcc gagcgtctgc gggggccgct tccaccctca gccgatgata atctcaagac
     4801 accttccgag cgtcagctca ctccccttcc accctcagct ccaccctcag cagatgataa
     4861 tatcaagaca cctgccgagc gtctgcgggg gccgcttcca ccctcagccg atgataatct
     4921 caagacacct tccgagcgtc agctcactcc ccttccaccc tcagctccac cctcagcaga
     4981 tgataatatc aagacacctg ccgagcgtct gcgggggccg cttccaccct cagccgatga
     5041 taatctcaag acaccttccg agcgtcagct cactcccctt ccaccctcag ctccaccctc
     5101 agcagatgat aatatcaaga cacctgccga gcgtctgcgg gggccgcttc caccctcagc
     5161 cgatgataat ctcaagacac cttccgagcg tcagctcact ccccttccac cctcagctcc
     5221 accctcagca gatgataata tcaagacacc tgccgagcgt ctgcgggggc cgcttccacc
     5281 ctcagccgat gataatctca agacaccttc cgagcgtcag ctcactcccc ttccaccctc
     5341 agctccaccc tcagcagatg ataatatcaa gacacctgcc gagcgtctgc ggggagcgtc
     5401 tgtgggttcc gcttccaccc tcagcggatg ataatctcaa gacaccttcc aaacgtcagc
     5461 tcactcccct tccaccctca gctccaccct cagcagatga taatatcaag acacctgccg
     5521 agcgtctgcg ggggccgctt ccaccctcag ccgatgataa tctcaagaca ccttccaaac
     5581 gtcagctcac tccccttcca ccctcagctc caccctcagc agatgataat atcaagacac
     5641 ctgccgagcg tctgcggggg ccgcttccac cctcagccga tgataatctc aagacacctt
     5701 ccgagcgtca gctcactccc cttccaccct cagctccacc ctcagcagat gataatatca
     5761 agacacctgc cgagcgtctg cgggggccgc ttccaccctc agcggatgat aatctcaaga
     5821 caccttccga gcgtcagctc actccccttc caccctcagc tccaacctca gcagatgata
     5881 atatcaagac acctgccgag cgtctgcggg ggccgcttcc accctcagcc gatgataatc
     5941 tcaagacacc tcccttagct actcaggagg ctgaggcaga aaaaccacgc aaacccaaga
     6001 ggcagagggc ggctgagatg gaaccacctc ccgaacccaa gaggcggagg gtcggtgacg
     6061 tggaaccgtc acgcaaaccc aagaggcgga gggccgctga cgtggaacca tcatcacccg
     6121 aacccaagag gcggagggtc ggtgatgtgg aaccgtcacg caaacccaag aggcggaggg
     6181 ccgctgacgt ggaaccatca tcacccgaac ccaagaggcg gaggttgagc tgagaagagg
     6241 ccagtgcact caagcctgag caataagaat aaaaccgagt agaacaaaat aaaaaattca
     6301 aaaaacaaaa caaaacccac actccaaaaa ctaacaaaga ataaataaat aatataaaaa
     6361 taaaataaa
//
