LOCUS       NM_001282507            1264 bp    mRNA    linear   PRI 12-JUN-2024
DEFINITION  Homo sapiens nuclear pore complex interacting protein family member
            A7 (NPIPA7), mRNA.
ACCESSION   NM_001282507 XM_005255736
VERSION     NM_001282507.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Rolland,T., Tasan,M., Charloteaux,B., Pevzner,S.J., Zhong,Q.,
            Sahni,N., Yi,S., Lemmens,I., Fontanillo,C., Mosca,R., Kamburov,A.,
            Ghiassian,S.D., Yang,X., Ghamsari,L., Balcha,D., Begg,B.E.,
            Braun,P., Brehme,M., Broly,M.P., Carvunis,A.R., Convery-Zupan,D.,
            Corominas,R., Coulombe-Huntington,J., Dann,E., Dreze,M., Dricot,A.,
            Fan,C., Franzosa,E., Gebreab,F., Gutierrez,B.J., Hardy,M.F.,
            Jin,M., Kang,S., Kiros,R., Lin,G.N., Luck,K., MacWilliams,A.,
            Menche,J., Murray,R.R., Palagi,A., Poulin,M.M., Rambout,X.,
            Rasla,J., Reichert,P., Romero,V., Ruyssinck,E., Sahalie,J.M.,
            Scholz,A., Shah,A.A., Sharma,A., Shen,Y., Spirohn,K., Tam,S.,
            Tejeda,A.O., Wanamaker,S.A., Twizere,J.C., Vega,K., Walsh,J.,
            Cusick,M.E., Xia,Y., Barabasi,A.L., Iakoucheva,L.M., Aloy,P., De
            Las Rivas,J., Tavernier,J., Calderwood,M.A., Hill,D.E., Hao,T.,
            Roth,F.P. and Vidal,M.
  TITLE     A proteome-scale map of the human interactome network
  JOURNAL   Cell 159 (5), 1212-1226 (2014)
   PUBMED   25416956
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138969.2 and AC136619.3.
            
            On Sep 3, 2021 this sequence version replaced NM_001282507.1.
            
            CCDS Note: The exon combination of this CCDS representation is
            inferred. It is supported by partial transcript alignments and by
            paralogous NPIPA gene alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1966682,
                              SAMEA1968189 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000530217.3/ ENSP00000431814.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-168               AC138969.2         10099-10266         c
            169-297             AC138969.2         5614-5742           c
            298-397             AC138969.2         1908-2007           c
            398-542             AC138969.2         1600-1744           c
            543-650             AC136619.3         4622-4729
            651-711             AC136619.3         5746-5806
            712-747             AC136619.3         5916-5951
            748-1264            AC136619.3         7311-7827
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p13.11"
     gene            1..1264
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /note="nuclear pore complex interacting protein family
                     member A7"
                     /db_xref="GeneID:101059938"
                     /db_xref="HGNC:HGNC:41982"
     exon            1..168
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..1215
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /note="Nuclear pore complex-interacting protein family
                     member A8"
                     /codon_start=1
                     /product="nuclear pore complex-interacting protein family
                     member A7"
                     /protein_id="NP_001269436.1"
                     /db_xref="CCDS:CCDS61864.1"
                     /db_xref="GeneID:101059938"
                     /db_xref="HGNC:HGNC:41982"
                     /translation="MFCCLGYEWLSGGCTTWHSAWVINTLADHRHRGTDFGGSPWLLI
                     ITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV
                     LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHREE
                     ERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMA
                     AVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECVLYPLPP
                     SADDNLKTPPECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTP
                     LPPSAPPSADDNLKTPPECVCSLPFHPQRMIISRN"
     exon            169..297
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            298..397
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            398..542
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            543..650
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            651..711
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            712..747
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
     exon            748..1264
                     /gene="NPIPA7"
                     /gene_synonym="NPIPA8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaatgaatg tatgtacatt tgttcctgag atacaggttg atggacggat ggctacatgg
       61 atgtgatgga gatggtttac tatcgggacc ttccgcatcc tgctgatgtt ttgttgctta
      121 ggatatgaat ggctgagcgg aggctgtaca acctggcact ctgcttgggt tatcaatact
      181 ctggctgacc atcgtcatcg tgggactgac tttggtggaa gtccttggtt acttatcatt
      241 actgtgtttc tgagaagtta taaatttgcc atctccctct gcacaagtta cctttgtgtg
      301 tctttcctga agactatctt cccatctcaa aatggacatg atggatccac ggatgtacag
      361 cagagagcca ggaggtccaa ccgccgtaga caggaaggaa ttaaaattgt cctggaagac
      421 atctttactt tatggagaca ggtggaaacc aaagttcgag ctaaaatccg taagatgaag
      481 gtgacaacaa aagtcaaccg tcatgacaaa atcaatggaa agaggaagac cgccaaagaa
      541 catctgagga aactaagcat gaaagaacgt gagcacagag aagaggagag gcaggtgtca
      601 gaggcagagg aaaatgggaa attggatatg aaagaaatac acacctacat ggaaatgttt
      661 caacgtgcgc aagcgttgcg gcggcgggca gaggactact acagatgcaa aatcacccct
      721 tctgcaagaa agcctctttg caaccgggtc agaatggcgg cagtggagca tcgtcattct
      781 tcaggattgc cctactggcc ctacctcaca gctgaaactt taaaaaacag gatgggccac
      841 cagccacctc ctccaactca acaacattct ataattgata actccctgag cctcaagaca
      901 ccttccgagt gtgtgctcta tccccttcca ccctcagcgg atgataatct caagacacct
      961 cccgagtgtc tgctcactcc ccttccaccc tcagctctac cctcagcgga tgataatctc
     1021 aagacacctg ccgagtgcct gctctatccc cttccaccct cagcggatga taatctcaag
     1081 acacctcccg agtgtctgct cactcccctt ccaccctcag ctccaccctc agcggatgat
     1141 aatctcaaga cacctcctga gtgtgtctgc tcactcccct tccaccctca gcggatgata
     1201 atctcaagaa actaaggaag aataaataaa taatataaaa ataaaatgaa tactgcagtc
     1261 ctta
//
