LOCUS       XM_047444515            3711 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens neuronal PAS domain protein 2 (NPAS2),
            transcript variant X18, mRNA.
ACCESSION   XM_047444515
VERSION     XM_047444515.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..3711
                     /gene="NPAS2"
                     /gene_synonym="bHLHe9; MOP4; PASD4"
                     /note="neuronal PAS domain protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 22 ESTs, 459 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 47 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4862"
                     /db_xref="HGNC:HGNC:7895"
                     /db_xref="MIM:603347"
     CDS             299..2464
                     /gene="NPAS2"
                     /gene_synonym="bHLHe9; MOP4; PASD4"
                     /codon_start=1
                     /product="neuronal PAS domain-containing protein 2 isoform
                     X8"
                     /protein_id="XP_047300471.1"
                     /db_xref="GeneID:4862"
                     /db_xref="HGNC:HGNC:7895"
                     /db_xref="MIM:603347"
                     /translation="MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMD
                     KTTVLEKVIGFLQKHNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTT
                     DGSIIYVSDSITPLLGHLPSDVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSPSPEYL
                     KSDSDLEFYCHLLRGSLNPKEFPTYEYIKFVGNFRSYNNVMQFGKGKSCCYRFLTKGQ
                     QWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPSEALHSSAL
                     KDKGSSLEPRQHFNTLDVGASGLNTSHSPSASSRSSHKSSHTAMSEPTSTPTKLMAEA
                     STPALPRSATLPQELPVPGLSQAATMPAPLPSPSSCDLTQQLLPQTVLQSTPAPMAQF
                     SAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDSNVQMFLQQPAVSL
                     SFSSTQRPEAQQQLQQRSAAVTQPQLGAGPQLPGQISSAQVTSQHLLRESSVISTQGP
                     KPMRSSQLMQSSGRSGSSLVSPFSSATAALPPSLNLTTPASTSQDASQCQPSPDFSHD
                     RQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQTVFQNPDAHPANSSSAPM
                     PVLLMGQAVLHPSFPASQPSPLQPAQARQQPPQHYLQVQAPTSLHSEQQDSLLLSTYS
                     QQPGTLGYPQPPPAQPQPLRPPRRVSSLSESSGLQQPPR"
ORIGIN      
        1 gcgtgcggaa gagtttgccg cgcgagcagc cggcctctcg caggagccga gggacccgcg
       61 cggctgcggc ccaggagcgg cggccgcgga gcccggagac ccgcagccgc ggcggcggcg
      121 gcggcggcgg cagcagctag agcagcgcct cccgccgccg cccgggagga gctcgccgcg
      181 cccgctcgcc gcctcgtctc ccagcggcgg cgggaggcgc gtctccccgg cccagtccgc
      241 gcccggcccc gcggggccgc tccggcccgc tccgaggaaa aactgcatag aaaatctaat
      301 ggatgaagat gagaaagaca gagccaagag agcttctcga aacaagtctg agaagaagcg
      361 tcgggaccag ttcaatgttc tcatcaaaga gctcagttcc atgctccctg gcaacacgcg
      421 gaaaatggac aaaaccaccg tgttggaaaa ggtcatcgga tttttgcaga aacacaatga
      481 agtctcagcg caaacggaaa tctgtgacat tcagcaagac tggaagcctt cattcctcag
      541 taatgaagaa ttcacccagc tgatgttgga ggcattagat ggcttcatta tcgcagtgac
      601 aacagacggc agcatcatct atgtctctga cagtatcacg cctctccttg ggcatttacc
      661 gtcggatgtc atggatcaga atttgttaaa tttcctccca gaacaagaac attcagaagt
      721 ttataaaatc ctttcttccc atatgcttgt gacggattcc ccctccccag aatacttaaa
      781 atctgacagc gatttagagt tttattgcca tcttctcaga ggcagcttga acccaaagga
      841 atttccaact tatgaataca taaaatttgt aggaaatttt cgctcttaca acaatgtgat
      901 gcagtttggc aaagggaagt cgtgttgcta ccggtttctg accaaaggtc agcagtggat
      961 ctggctgcag actcactact acatcaccta ccatcagtgg aactccaagc ccgagttcat
     1021 cgtgtgcaca cactcggtgg tcagttacgc agatgtccgg gtggaaagga ggcaggagct
     1081 ggctctggaa gacccgccat ccgaggccct ccactcctca gcactaaagg acaagggctc
     1141 aagcctggaa cctcggcagc actttaacac actcgacgtg ggtgcctcgg gccttaatac
     1201 cagtcattcg ccatcggcgt cctcaagaag ttcccacaaa tcctcgcaca cagccatgtc
     1261 agaacccacc tccactccca ccaagctgat ggcagaggcc agcaccccgg ctttgccaag
     1321 atcagccacc ctgccccaag agttacctgt ccccgggctc agccaggcag ccaccatgcc
     1381 ggcccctctg ccttccccat cgtcctgcga cctcacacag cagctcctgc ctcagaccgt
     1441 tctgcagagc acgcccgctc ccatggcaca gttttcggca cagttcagca tgttccagac
     1501 catcaaagac cagctagagc agcggacgcg gatcctgcag gccaatatcc ggtggcaaca
     1561 ggaagagctc cacaagatcc aggagcagct ctgcctggtc caggactcca acgtccagat
     1621 gttcctgcag cagccagctg tatccctgag cttcagcagc acccagcgac ctgaggctca
     1681 gcagcagcta cagcaaaggt cagctgcagt gactcagccc cagctcgggg cgggccccca
     1741 acttccaggg cagatctcct ctgcccaggt cacaagccag cacctgctca gagaatcaag
     1801 tgtgatatca acccagggtc caaagccaat gagaagctca cagctaatgc agagcagcgg
     1861 ccgctctgga agcagcctag tgtccccgtt cagcagcgcc acagctgcgc tcccgccaag
     1921 tctgaatctg accacacctg cttccacctc ccaggatgcc agccagtgcc agcccagccc
     1981 agacttcagc catgatcggc agctcaggct gttgctgagc cagcccatcc agcccatgat
     2041 gcccgggtcc tgtgacgcaa ggcagccctc ggaagtcagc aggacgggac ggcaagtcaa
     2101 gtacgcccag agccagaccg tgtttcaaaa tccagacgca caccccgcca acagcagcag
     2161 cgccccgatg cccgtcctgc tgatggggca ggcggtgctc caccccagct tccctgcctc
     2221 ccaaccatcg cccctgcagc ctgcacaggc ccggcagcag ccaccgcagc actacctgca
     2281 ggtacaggca ccaacctctt tgcacagtga gcagcaggac tcgctacttc tctccaccta
     2341 ctcacaacag ccagggaccc tgggctaccc ccaaccaccc ccagcacagc cccagcccct
     2401 acgtcctccc cgaagggtca gcagtctgtc tgagtcgtca ggcctccagc agccgccccg
     2461 ataatgcccc ggcactgaag tcgggacaca atcagcttta accaatggat gaggggggtg
     2521 gccacaggag atggggagag gagtctgaac taaacccctg gcttttgtgc acactgcata
     2581 cgtttcagaa ctcctggatg gtaaccatct ctggagtgca gcgcttgctg cagtggaaat
     2641 gatcaggaat actgaccgtg tttctcttgc ctccgaggtt cttgggcaca ctctatagcc
     2701 atactggaca ggaaccaggt gccccgtgta ggcatcgtcg gtcggtttgc cgtcagagat
     2761 ggcgcatctc gctgcatccc ccgagagtac accggttgct ctagccacct gcggcccgcc
     2821 catctgcgct agctggcctt cacgctcttg atcgtctttc ctttgtattg gagaaggact
     2881 gggtcagaga tctgttggag agagagaata aagagattat ttttcattat ttttaaatgg
     2941 ttgtttttgt tttaatttgc acagctacac agaggaaata acttaggcac tttctgtttt
     3001 ttttaaaaaa ataataaggt ctcatggctt catttagaga ccacagtaac aacagcagcc
     3061 caccaatcag agaagctggt tgttattaac caagctacag attcacactt tctggcctaa
     3121 accctaatgg gatgaggctt ttcaccccag gccatgctgg tggtgatttt ttagccccta
     3181 aataaaacac tggactattt cctgtttact tcattgattg caactacaaa ggtggactca
     3241 aagcaaagca caatcatgcc agccaacatt ccagaattct gctgagaact ccaagtctgt
     3301 gaggggagag gttttacaag ccagacaggc ctgggggact gcagtcccca aggagaccct
     3361 gccacatgct ggccctttga gtgagaatgc tgcatctttc tacatatctt catgagaata
     3421 ctgagaattg gattttcctt ttcaaaatgc actttgcttt ttttgtatgt tttgttatgt
     3481 tgagatgttt ctaaagaaaa gattttatgt aattataaga tgaagcgtag tgaattgtac
     3541 agctgttgta ataatgacct atttctatat aaaataaaat tgtatggctt atgtgtaaat
     3601 tattttgtat ctgagatacc agttcctttt cccaaatata aaagtataaa agttttcttg
     3661 tgtttttctg tgagtgaaaa ttttgtaata aattaacaaa tttgtacaat t
//
