LOCUS       XM_047438885            1955 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens neuronal PAS domain protein 1 (NPAS1),
            transcript variant X7, mRNA.
ACCESSION   XM_047438885
VERSION     XM_047438885.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..1955
                     /gene="NPAS1"
                     /gene_synonym="bHLHe11; MOP5; PASD5"
                     /note="neuronal PAS domain protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 4 ESTs, 9 long SRA reads, 2 Proteins, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:4861"
                     /db_xref="HGNC:HGNC:7894"
                     /db_xref="MIM:603346"
     CDS             204..1568
                     /gene="NPAS1"
                     /gene_synonym="bHLHe11; MOP5; PASD5"
                     /codon_start=1
                     /product="neuronal PAS domain-containing protein 1 isoform
                     X7"
                     /protein_id="XP_047294841.1"
                     /db_xref="GeneID:4861"
                     /db_xref="HGNC:HGNC:7894"
                     /db_xref="MIM:603346"
                     /translation="MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKAPSGPCLQA
                     QRKEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAA
                     LGAPPWGLRAAGPPAGLAPGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFL
                     YISETVSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSS
                     SSSSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKQVIHVTGR
                     LRAHALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSEL
                     VGRSCYQFVHGQDATRIRQSHVDSKPRVAKLLWMPSSFQPAWPVRRHPARGQSPQSRS
                     LRRKGSRLPQRRTRPPRPRANASKWSPARGKPKAPRTVATRIPPATRPHRGPSSPLSS
                     GQGS"
ORIGIN      
        1 gccgaggtgg gcgccgagag ctgggcgcca cagcccgcgc gtcccgctgc gccccgcgcg
       61 ccccggggtc tatggagctg cccctccgcg ccgcccggcc ggccccacgc cgcgcccgga
      121 gcctgctctg cggccaagta atcggactgg cggtcctgcg ggagactcgg ggctcggagc
      181 ccgcctgagc gagccccccg gagatggcgg ccccctatcc cggcagtggc ggcggaagcg
      241 aggtcaaatg cgtgggaggc cgcggcgcca gcgtcccctg ggactttcta cccgggctga
      301 tggtcaaggc gccgtccgga ccgtgcctgc aggcgcagcg caaggagaag tcccggaacg
      361 cggcgcgctc gcggcgcggg aaggagaacc tggagttctt cgagctggcc aagcttctcc
      421 cgctgcccgg cgccatctcc agccagctgg acaaggcttc catcgtgcgc ctcagcgtca
      481 cctacctccg cctgcgccgg ttcgccgcgc tgggggcgcc gccctggggg ctgagagccg
      541 cggggccgcc agctggcctc gccccaggcc gccgcggccc cgcagcgctg gtctccgaag
      601 tcttcgagca gcacctggga ggtcacatct tgcagtccct ggatggcttt gtgttcgcct
      661 tgaaccagga aggaaaattc ctctacatct cagagacagt ctccatctat ctgggtctct
      721 cacaggtgga gatgacgggc agcagcgtct tcgactacat tcaccctggg gaccactcag
      781 aggtgctgga gcaactgggg ctgcggacgc cgacgcccgg ccccccaacc ccgccctccg
      841 tctcctcttc ctcctcctct tcctcttcgc ttgcagatac ccccgagatc gaggccagcc
      901 tcaccaaggt gcccccctcc tccctggtcc aggagcgctc cttctttgtc cgcatgaaat
      961 ccacgctcac caagaggggg ctgcacgtca aggcctcagg gtacaagcag gtcatccacg
     1021 tgactgggcg ccttcgggcc cacgccctgg gccttgtggc cctcgggcac acgttgcccc
     1081 cggcccccct ggctgagctg ccactccatg gacacatgat cgtcttccgt ctcagcctgg
     1141 gtctcaccat ccttgcttgt gagagcagag tcagcgacca catggacctg gggccctcag
     1201 agctggtggg ccgcagctgc taccagtttg tccacggaca ggacgccacg aggatccgcc
     1261 agagccacgt ggactccaag ccgagggtgg ccaaactcct ttggatgcct tccagcttcc
     1321 agccagcgtg gcctgtgagg aggcatccag cccggggcca gagcccacag agccggagcc
     1381 tccgacggaa gggaagcagg ctgccccagc ggagaacgag gccccccaga cccagggcaa
     1441 acgcatcaaa gtggagcccg gcccgaggga aaccaaaggc tccgaggaca gtggcgacga
     1501 ggatccctcc agccacccgg ccacaccgag gcccgagttc acctctgtca tccgggcagg
     1561 ggtcctgaag caggatccgg tgcggccatg gggcctggcg cctcccgggg accccccgcc
     1621 caccctcctg cacgcgggct tcctgccgcc ggtggtgcgg ggcctgtgca cacccggcac
     1681 catccgctac ggccccgcgg agctgggcct ggtgtacccg cacctgcaga ggctgggtcc
     1741 gggccccgcg ctcccggagg ccttttaccc gcccctgggc ctgccctacc cggggcccgc
     1801 gggcaccagg ctgccgcgga agggggactg aggactggca gagctgccgg cgccggaccc
     1861 tgcgacaacc ggggtccccc aggacagtag gcccggctct gcccgtagcc ctgagaatta
     1921 aacgccggct ctccctgcag tggtttgggc tccgg
//
