LOCUS       XM_006724504            5795 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens neuroligin 4 X-linked (NLGN4X), transcript
            variant X4, mRNA.
ACCESSION   XM_006724504
VERSION     XM_006724504.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 6, 2016 this sequence version replaced XM_006724504.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5795
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..5795
                     /gene="NLGN4X"
                     /gene_synonym="ASPGX2; AUTSX2; HLNX; HNL4X; NLGN4"
                     /note="neuroligin 4 X-linked; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 4 ESTs, 443 long SRA reads, 17 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:57502"
                     /db_xref="HGNC:HGNC:14287"
                     /db_xref="MIM:300427"
     CDS             510..3020
                     /gene="NLGN4X"
                     /gene_synonym="ASPGX2; AUTSX2; HLNX; HNL4X; NLGN4"
                     /codon_start=1
                     /product="neuroligin-4, X-linked isoform X1"
                     /protein_id="XP_006724567.1"
                     /db_xref="GeneID:57502"
                     /db_xref="HGNC:HGNC:14287"
                     /db_xref="MIM:300427"
                     /translation="MSRPQGLLWLPLLFTPVCVMLNSNVLLWLTALAIKFTLIDSQAQ
                     YPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRN
                     TTQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDGAN
                     TKKNADDITSNDRGEDEDIHDQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIV
                     ITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAG
                     ASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILADKVGCNMLDTTDM
                     VECLRNKNYKELIQQTITPATYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVN
                     QGEGLKFVDGIVDNEDGVTPNDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADK
                     ENPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSA
                     HGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKF
                     IHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIF
                     QYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTT
                     VLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTND
                     IAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNT
                     ITMIPNTLTGMQPLHTFNTFSGGQNSTNLPHGHSTTRV"
ORIGIN      
        1 tagagtttat atttccttta aatttctaga gaaaacagat tgtcatgtat ttttatagag
       61 acaaaatact gatgaaggtg atatacaggt agcttaatta tgatttttct aagatttaat
      121 tagatggtaa atttacagta attattaata tgttcactgc ttttattaaa aaccatcaat
      181 tctgaatcca caatgacaca aatggctgcc ttggagtttt cataagaaat tgtccctgga
      241 ggtgttggat gatcacagct tccttggagc attgcagttg ctggaatcca gtttcaggat
      301 taagggaggg ctgcctcctt gcaatgggct gccaagaaaa cggctgtgct tgttcttaac
      361 ctcaggctct gtctgtgatc agtctgagag tctctcccag gtctactgct ccctggaaag
      421 ccctatctct ctgcaggctc gcctctgggc tttgtctcct tggagccaca tcactgggac
      481 agctgtggat gtggatgcag atttgaacca tgtcacggcc ccagggactg ctatggcttc
      541 ctttgttgtt caccccggtc tgcgtcatgt taaactccaa tgtcctcctg tggttaactg
      601 ctcttgccat caagttcacc ctcattgaca gccaagcaca gtatccagtt gtcaacacaa
      661 attatggcaa aatccggggc ctaagaacac cgttacccaa tgagatcttg ggtccagtgg
      721 agcagtactt aggggtcccc tatgcctcac cccccactgg agagaggcgg tttcagcccc
      781 cagaaccccc gtcctcctgg actggcatcc gaaatactac tcagtttgct gctgtgtgcc
      841 cccagcacct ggatgagaga tccttactgc atgacatgct gcccatctgg tttaccgcca
      901 atttggatac tttgatgacc tatgttcaag atcaaaatga agactgcctt tacttaaaca
      961 tctacgtgcc cacggaagat ggagccaaca caaagaaaaa cgcagatgat ataacgagta
     1021 atgaccgtgg tgaagacgaa gatattcatg atcagaacag taagaagccc gtcatggtct
     1081 atatccatgg gggatcttac atggagggca ccggcaacat gattgacggc agcattttgg
     1141 caagctacgg aaacgtcatc gtgatcacca ttaactaccg tctgggaata ctagggtttt
     1201 taagtaccgg tgaccaggca gcaaaaggca actatgggct cctggatcag attcaagcac
     1261 tgcggtggat tgaggagaat gtgggagcct ttggcgggga ccccaagaga gtgaccatct
     1321 ttggctcggg ggctggggcc tcctgtgtca gcctgttgac cctgtcccac tactcagaag
     1381 gtctcttcca gaaggccatc attcagagcg gcaccgccct gtccagctgg gcagtgaact
     1441 accagccggc caagtacact cggatattgg cagacaaggt cggctgcaac atgctggaca
     1501 ccacggacat ggtagaatgc ctgcggaaca agaactacaa ggagctcatc cagcagacca
     1561 tcaccccggc cacctaccac atagccttcg ggccggtgat cgacggcgac gtcatcccag
     1621 acgaccccca gatcctgatg gagcaaggcg agttcctcaa ctacgacatc atgctgggcg
     1681 tcaaccaagg ggaaggcctg aagttcgtgg acggcatcgt ggataacgag gacggtgtga
     1741 cgcccaacga ctttgacttc tccgtgtcca acttcgtgga caacctttac ggctaccctg
     1801 aagggaaaga cactttgcgg gagactatca agttcatgta cacagactgg gccgataagg
     1861 aaaacccgga gacgcggcgg aaaaccctgg tggctctctt tactgaccac cagtgggtgg
     1921 cccccgccgt ggccaccgcc gacctgcacg cgcagtacgg ctcccccacc tacttctatg
     1981 ccttctatca tcactgccaa agcgaaatga agcccagctg ggcagattcg gcccatggtg
     2041 atgaggtccc ctatgtcttc ggcatcccca tgatcggtcc caccgagctc ttcagttgta
     2101 acttttccaa gaacgacgtc atgctcagcg ccgtggtcat gacctactgg acgaacttcg
     2161 ccaaaactgg tgatccaaat caaccagttc ctcaggatac caagttcatt cacacaaaac
     2221 ccaaccgctt tgaagaagtg gcctggtcca agtataatcc caaagaccag ctctatctgc
     2281 atattggctt gaaacccaga gtgagagatc actaccgggc aacgaaagtg gctttctggt
     2341 tggaactcgt tcctcatttg cacaacttga acgagatatt ccagtatgtt tcaacaacca
     2401 caaaggttcc tccaccagac atgacatcat ttccctatgg cacccggcga tctcccgcca
     2461 agatatggcc aaccaccaaa cgcccagcaa tcactcctgc caacaatccc aaacactcta
     2521 aggaccctca caaaacaggg cctgaggaca caactgtcct cattgaaacc aaacgagatt
     2581 attccaccga attaagtgtc accattgccg tcggggcgtc gctcctcttc ctcaacatct
     2641 tagcttttgc ggcgctgtac tacaaaaagg acaagaggcg ccatgagact cacaggcgcc
     2701 ccagtcccca gagaaacacc acaaatgata tcgctcacat ccagaacgaa gagatcatgt
     2761 ctctgcagat gaagcagctg gaacacgatc acgagtgtga gtcgctgcag gcacacgaca
     2821 cactgaggct cacctgcccg ccagactaca ccctcacgct gcgccggtcg ccagatgaca
     2881 tcccacttat gacgccaaac accatcacca tgattccaaa cacactgacg gggatgcagc
     2941 ctttgcacac ttttaacacc ttcagtggag gacaaaacag tacaaattta ccccacggac
     3001 attccaccac tagagtatag ctttgcccta tttcccttcc tatccctctg ccctacccgc
     3061 tcagcaacat agaagaggga aggaaagaga gaaggaaaga gagagagaaa gaaagtctcc
     3121 agaccaggaa tgtttttgtc ccactgactt aagacaaaaa tgcaaaaagg cagtcatccc
     3181 atcccggcag acccttatcg ttggtgtttt ccagtattac aagatcaact tctgaccctg
     3241 tgaaatgtga gaagtacaca tttctgttaa aataactgct ttaagatctc taccactcca
     3301 atcgatgttt agtgtgatag gacatcacca tttcaaggcc ccgggtgttt ccaacgtcat
     3361 ggaagcagct gacacttctg aaactcagcc aaggacactt gatatttttt aattacaatg
     3421 gaagtttaaa catttctttc tgtgccacac aatggatggc tctccttaag tgaagaaaga
     3481 gtcaatgaga ttttgcccag cacatggagc tgtaatccag agagaaggaa acgtagaaat
     3541 ttattattaa aagaatggac tgtgcagcga aatctgtacg gttctgtgca aagaggtgtt
     3601 ttgccagcct gaactatatt taagagactt tgtaaaaaag aaaaatgtat atagctgtga
     3661 gtttaaacaa aaaccacaaa cagacaaaca agaaaaaaag cttttattgg tgttttcact
     3721 ttgaaagagc ttttagcaag gttgtgcttt tcattgtgct ctgtacgtat ataaatatat
     3781 atatatatac acacacacac acacattagt catatcacct ctgtttcctc cccaacaaaa
     3841 gaggcttttc ttcttaatta cttgtggtaa acaaagacat gggattttct tacatgagat
     3901 tctcatttgt aggaggatgt gatgtcccac agaagaccca gacggtctgt gtggcctatt
     3961 tcccccgtca ggttgcacag gtgcatgcaa gagcattctt aggagaccac tgttttgaaa
     4021 aacttttgac ttgtacgtgt tagccttcat gaaattgcag tacagagatg ggtccccaaa
     4081 gtggagtgta tttacagctt gttaaattag agacatgcac acacaaagaa tcagtaggga
     4141 gaaacaaaaa tacaagtccc gttctgtagc tctggccctt tgaatatgtt taggaagagt
     4201 tgcttcccat ttcagggccc tgccaaaaaa agaagaaagc ttgcctttgg tggggctatg
     4261 ccccttggag taaatacggc tctgtgttcc ctagcagctg cgggagggtt tggccgatga
     4321 agtacctgct cagcttagct aatcagattg aaggaagaca tgtgtctttc ctttttgttt
     4381 aagcactcgg tcccttattt atcagtaagc aggtttttaa aaatctttta tatcatttat
     4441 gggatcaaac atatgattgt ctgaaaacat cactttttgt ggatttgtgt atccggtcac
     4501 caaacggtga atattataga agaatggggg aagaaaggat agaatattaa aactgctttg
     4561 catgggtttt ctgggaaatt aggataactt cactgagaag acattgaatg gaaattattc
     4621 acccatttta aattggtgac ctagggatca gagatttgtc tttccaacag cttgtcattt
     4681 tttcatttct cttctcattt ttcaggaaag ttttgagtgt tataaggtgg aaggaaacat
     4741 agtagcaatg gatacttttt tgaaaaatta ttgcattacc aagaaacagt agccaaagat
     4801 atttgaagat catgttcctc ggctccattg tgggttattc tagaaatcca gtcttaaatc
     4861 tctccgctaa agtggacatt ccccataaaa attgtccagc tgcctggctc ttttgcaata
     4921 acaacctttg attactgaat ccctacactc aaactatagt gatatatcag tgtttgagag
     4981 tgacctctag aaaaaagaaa agtgttttta gaaatgcgta caagtcaccc ccaaatccta
     5041 ttgcttatct tgggttaaat ttgagagtga ttctctgtat ataaatatgt gaaatattat
     5101 tatctcaact tagcacacgt gaagcaacat ttctttccta cagagaggtg tcatggtaag
     5161 atttcattcc gaattcattg tttcatagag ctatgatcag gccatttctg caagcaatgt
     5221 atgaccccac ctgagcaacc acaaataggc tctctgtgaa actacaaagg aagttatgtg
     5281 tggcatccat gttggtttcg tctgtctgta atgtgaattc cagtatttgt ttagtatttc
     5341 cagttgtctc ctgctagcaa tatgtacagt aacgcgtcag gcttgtgaca tttgaataag
     5401 gaaaaacaga gttcctgtta agtgaataac tttagctttt acaggggatt atgatcaaaa
     5461 gtgattttag tacatcttaa atgatatctt atttctacat ggaaagaagt tatagaatct
     5521 tcatagagtt ctatgagaaa aaatatactt gctatctata aaaaagagaa aaaagaaaaa
     5581 aaatgagaaa aaagtaagaa aaaaaaaaat cctgtcctag gcttttactc ttgatcttca
     5641 aaggcacgca gggtttaatg gttccttggg ttattatttt gcagttttgt tttttatttt
     5701 gccttaagta atgatagaag atatatatgg ccggacacat atgtataaac ttttcagcag
     5761 catttttaat aataaaatat cacagtattt tctaa
//
