LOCUS       NM_001385473            5753 bp    mRNA    linear   PRI 15-DEC-2024
DEFINITION  Homo sapiens NBPF member 11 (NBPF11), transcript variant 10, mRNA.
ACCESSION   NM_001385473
VERSION     NM_001385473.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5753)
  AUTHORS   Tsuritani,K., Irie,T., Yamashita,R., Sakakibara,Y., Wakaguri,H.,
            Kanai,A., Mizushima-Sugano,J., Sugano,S., Nakai,K. and Suzuki,Y.
  TITLE     Distinct class of putative 'non-conserved' promoters in humans:
            comparative studies of alternative promoters of human and mouse
            genes
  JOURNAL   Genome Res 17 (7), 1005-1014 (2007)
   PUBMED   17567985
REFERENCE   2  (bases 1 to 5753)
  AUTHORS   Vandepoele,K., Van Roy,N., Staes,K., Speleman,F. and van Roy,F.
  TITLE     A novel gene family NBPF: intricate structure generated by gene
            duplications during primate evolution
  JOURNAL   Mol Biol Evol 22 (11), 2265-2274 (2005)
   PUBMED   16079250
REFERENCE   3  (bases 1 to 5753)
  AUTHORS   Laureys,G., Speleman,F., Versteeg,R., van der Drift,P., Chan,A.,
            Leroy,J., Francke,U., Opdenakker,G. and Van Roy,N.
  TITLE     Constitutional translocation t(1;17)(p36.31-p36.13;q11.2-q12.1) in
            a neuroblastoma patient. Establishment of somatic cell hybrids and
            identification of PND/A12M2 on chromosome 1 and NF1/SCYA7 on
            chromosome 17 as breakpoint flanking single copy markers
  JOURNAL   Oncogene 10 (6), 1087-1093 (1995)
   PUBMED   7700633
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239803.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR14038195.1407126.1,
                                           SRR14038191.140147.1 [ECO:0000332]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-562               AC239803.3         25390-25951
            563-834             AC239803.3         33985-34256
            835-933             AC239803.3         39862-39960
            934-1085            AC239803.3         41634-41785
            1086-1227           AC239803.3         41858-41999
            1228-1375           AC239803.3         50383-50530
            1376-1585           AC239803.3         50633-50842
            1586-1688           AC239803.3         52670-52772
            1689-1903           AC239803.3         53604-53818
            1904-1976           AC239803.3         54870-54942
            1977-2188           AC239803.3         55405-55616
            2189-2398           AC239803.3         56961-57170
            2399-2501           AC239803.3         58949-59051
            2502-2716           AC239803.3         59885-60099
            2717-2789           AC239803.3         61136-61208
            2790-2995           AC239803.3         61673-61878
            2996-3047           AC239803.3         63183-63234
            3048-3211           AC239803.3         67130-67293
            3212-3263           AC239803.3         68336-68387
            3264-3436           AC239803.3         69017-69189
            3437-3488           AC239803.3         69909-69960
            3489-3661           AC239803.3         70557-70729
            3662-3713           AC239803.3         71439-71490
            3714-3882           AC239803.3         72143-72311
            3883-3991           AC239803.3         73026-73134
            3992-5753           AC239803.3         73759-75520
FEATURES             Location/Qualifiers
     source          1..5753
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1q21.2"
     gene            1..5753
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /note="NBPF member 11"
                     /db_xref="GeneID:200030"
                     /db_xref="HGNC:HGNC:31993"
                     /db_xref="MIM:614001"
     exon            1..562
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            563..834
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            835..933
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1085
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1227
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1228..1375
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1376..1585
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     CDS             1411..4008
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /note="isoform b is encoded by transcript variant 10;
                     neuroblastoma breakpoint family, member 24; neuroblastoma
                     breakpoint family member 11; NBPF family member NBPF11"
                     /codon_start=1
                     /product="NBPF family member NBPF11 isoform b"
                     /protein_id="NP_001372402.1"
                     /db_xref="CCDS:CCDS41381.2"
                     /db_xref="GeneID:200030"
                     /db_xref="HGNC:HGNC:31993"
                     /db_xref="MIM:614001"
                     /translation="MVVSAGPWSSEKAEMNILEINEKLRPQLAENKQQFRNLKERCFL
                     TQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQ
                     ERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQ
                     KLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPC
                     DSIQPHKNIKITFEEDKVNSSLVVDRESSHDGCQDALNILPVPGPTSSATNVSMVVSA
                     GPLSSEKAEMNILEINEKLCPQLAEKKQQFRSLKEKCFVTQVACFLAKQQNKYKYEEC
                     KDLIKSMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASR
                     SLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVA
                     EKVQKSSSPREMQKAEEKEVPEDSLEECAITCSNSHGPYDSNQPHRKTKITFEEDKVD
                     STLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYS
                     TLSIPPERLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELL
                     DEKEPEVLQDSLDRCYSTPSVYLGLTDSCQPYRSAFYVLEQQRIGLAVDMDEIEKYQE
                     VEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEE
                     QYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDVIQLLPVVLNS
                     LTPASPTEVPFMHWRKNMLAFLLTWEKLKRRGRGRKEGEEDQRRKEEGEEKKGKKIKT
                     HHAPGSAAC"
     exon            1586..1688
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1689..1903
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1904..1976
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            1977..2188
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2189..2398
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2399..2501
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2502..2716
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2717..2789
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2790..2995
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            2996..3047
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3048..3211
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3212..3263
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3264..3436
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3437..3488
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3489..3661
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3662..3713
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3714..3882
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3883..3991
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     exon            3992..5753
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5733..5738
                     /regulatory_class="polyA_signal_sequence"
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /note="hexamer: ATTAAA"
     polyA_site      5753
                     /gene="NBPF11"
                     /gene_synonym="NBPF24"
                     /note="major polyA site"
ORIGIN      
        1 gcagtcctaa acgcggggta gctccgggct tccgaggggg tgtgtctccc gcctctttaa
       61 cctggcaggg gcggttcaag tggccgggga aatcagcgaa ttgcagggtc aagggctggt
      121 gctttgaaag agaggcggag gggagagagg gattttcccg tccccgctgc gctctgtcct
      181 ccattactcc ttttctcggc ccgcggcccg aacccgctgt gcggtagagg cagccgggtc
      241 cctttaaggc ccagctgcgc ctgtgccttg ggctctcctg acacggccca tccggaccct
      301 gaggagccag cgggccgcaa gcaagttgct gggcggcggt ggagatagcg gcggtgctgg
      361 gaggggtagg tgagggtcgc gaggctgcct gagcttctga gtgagcctgg tgattttggg
      421 aacgcgggac gggcgacctg cggcgccagg agcggggccg aggtacggcg gcacggctgc
      481 agcctggatg ggaagttcaa gtttactgcg aagtccaccc agcgttccgg aggtgagggc
      541 gccgcgccag gccgggcggg aggcattctg aaggcaaatc ctgtttagac ccaggcaaag
      601 gttcctggtg acccaggctc tcatgagcag attgtccctt atcattctcc tgaggatgtc
      661 tggagcttca gtgctgtgtg ctcttggcct ccacactggg ggtgccacca actcccactg
      721 tccagggctt ctggtggact ctccgaggca ccgatgtaga aacttaccca ttcagtgcac
      781 caagagcagc ttcacatggt gtgggccgac atgaagagct gccagatcca acagaaatgt
      841 gattgataac agtaaagcca cactcctcaa gtgcctgaaa tacccctcat tgtcttcttc
      901 aggtggcaag ggctctggaa cagccacata aaggctgatg acttcaggga catgagcatg
      961 ggatacctgt catcaccacc accatgaagt tgggattcag gaaggagttt aatcatgtaa
     1021 agaatcctgt gaccagtatg agcttctctc aggccacaca gggcactcaa gtgaacaggg
     1081 tcatgccctt gaagataagg atggtcaaac aaaataatat catacctgga gaaactcaga
     1141 tcttgctaag atttactggt tgggaatcca aagttaatgc caagaagcag ctgccagttg
     1201 ggatcaaatg tgagcctatg gatcaagacg gttacctggc acgctggcca caatctacct
     1261 cactcttatc agagtctgag cagtgctttc agctctgagt tgaggcacct cgaaccttgt
     1321 ttttgtggtg aaggatccta aagtgctgtg gggagtgatc acatttttca caacatccct
     1381 gactccacct cttctgccac aaacgtcagc atggtggtat cagccggccc ttggtccagc
     1441 gagaaggcag agatgaacat tctagaaatc aacgagaaat tgcgccccca gttggcagag
     1501 aacaaacagc agttcagaaa cctcaaagag agatgttttc taactcaact ggccggcttc
     1561 ctggccaacc gacagaagaa atacaagtat gaagagtgta aagacctcat aaaatttatg
     1621 ctgaggaatg agcgacagtt caaggaggag aagcttgcag agcagctcaa gcaagctgag
     1681 gagctcaggc aatataaagt cctggttcac tctcaggaac gagagctgac ccagttaagg
     1741 gagaagttac gggaagggag agatgcctcc cgctcattga atgagcatct ccaggccctc
     1801 ctcactccgg atgagccgga caagtcccag gggcaggacc tccaagaaca gctggctgag
     1861 gggtgtagac tggcacagca ccttgtccaa aagctcagcc cagaaaatga cgaagatgag
     1921 gatgaagatg ttcaagttga ggaggatgag aaagtactgg aatcatctgc ccccagggag
     1981 gtgcagaagg ctgaagagag caaagtccct gaggactcac tggaggaatg tgccatcact
     2041 tgttcaaata gccacggccc ttgtgactcc atccagcctc acaagaacat caaaatcaca
     2101 tttgaggaag acaaagtcaa ctcatctctg gttgtagaca gagaatcctc tcatgatgga
     2161 tgtcaggatg ctctaaacat tctcccagtc cctggcccca cctcttctgc cacaaacgtc
     2221 agcatggtgg tatcagccgg ccctttgtcc agcgagaagg cagagatgaa cattctagaa
     2281 atcaatgaga aattgtgccc ccagctggca gagaagaaac agcagttcag aagcctcaaa
     2341 gagaaatgtt ttgtaactca agtggcctgc ttcctggcca agcagcagaa caaatacaaa
     2401 tatgaagagt gcaaagacct cataaaatct atgctgagga atgagcgaca gttcaaggag
     2461 gagaagcttg cagagcagct gaagcaagct gaggagctca ggcaatataa agtcctggtt
     2521 cactctcagg aacgagagct gacccagtta agggagaagt tacgggaagg gagagatgcc
     2581 tcccgctcat tgaatgagca tctccaggcc ctcctcactc cggatgagcc ggacaagtcc
     2641 caggggcagg acctccaaga acagctggct gaggggtgta gactggcaca gcaccttgtc
     2701 caaaagctca gcccagaaaa tgataacgat gacgatgaag atgttcaagt tgaggtggct
     2761 gagaaagtgc agaaatcgtc ttcccccagg gagatgcaga aggctgaaga aaaggaagtc
     2821 cctgaggact cactggagga gtgtgccatc acttgttcaa atagccatgg cccttatgac
     2881 tccaaccagc cacatagaaa aaccaaaatc acatttgagg aagacaaagt cgactcaact
     2941 ctcattggct catcctctca tgttgaatgg gaggatgctg tacacattat cccagaaaat
     3001 gaaagtgatg atgaggaaga ggaagaaaaa gggccagtgt ctcccaggaa tctgcaggag
     3061 tctgaagagg aggaagtccc ccaggagtcc tgggatgaag gttattcgac tctctcaatt
     3121 cctcctgaaa ggttggcctc gtaccagtct tacagcagca catttcactc attagaggaa
     3181 cagcaagtct gcatggctgt tgacataggc agacatcggt gggatcaagt gaaaaaggag
     3241 gaccaagagg caacaggtcc caggctcagc agggagctgc tggatgagaa agagcctgaa
     3301 gtcttgcagg actcactgga tagatgttat tcaactcctt cagtttatct tggactgact
     3361 gactcatgcc agccctacag aagtgccttt tacgtattgg agcaacagcg tattggcttg
     3421 gctgttgaca tggatgaaat tgaaaagtac caagaagtgg aagaagacca agacccatca
     3481 tgccccaggc tcagcaggga gctgctggct gagaaagagc ctgaagtctt gcaggactca
     3541 ctggatagat gttattcgac tccttcaggt tatcttgaac tgcctgactt aggccagccc
     3601 tacagaagtg ctgtttactc attggaggaa cagtaccttg gcttggctct tgacgtggac
     3661 agaattaaaa aggaccaaga agaggaagaa gaccaaggcc caccgtgccc caggctcagc
     3721 agggagctgc tggaggtagt agagcctgaa gtcttgcagg actcactgga tgttattcaa
     3781 ctccttccag ttgtcttgaa cagcctgact cctgccagcc ctacggaagt tccttttatg
     3841 cattggagga aaaacatgtt ggcttttctc ttgacgtggg agaaattgaa aagaagggga
     3901 aggggaagaa aagaagggga agaagatcaa agaagaaaag aagaagggga agaaaagaag
     3961 gggaagaaga tcaaaaccca ccatgcccca ggctcagcag cgtgctgatg gaagtggaag
     4021 tgcctgaagt cttacaggac tcactggata gatattattc gactccatca atgtactttg
     4081 aactacctga ctcattccag cactacagaa gtgtgtttta ctcatttgag gaacagcaca
     4141 tcagctttgc ccttgacatg gacaataggt tttttacttt gacggtgaga agtctccacc
     4201 tggtcttcca gatgggagtc atattcccac aataagcagc ccttactaag ccgagaggtg
     4261 tcattcctgc aggcaggacc tataggcacc tgaagatttg aatgaaacta tagttccatt
     4321 tggaagccca gacataggat gggtcagtgg gcatggctct attcctattc tcagagcatg
     4381 ccagtggcaa cctgtgctca gtctgaagac aatggaccca cgttaggtgt gacacgttca
     4441 cataactgtg cagcacatgc cgggagtgat cagtcggaca ttttaatttg aaccacgtat
     4501 ctctgggtag ctacaaaatt cctcagggat ttcattttgc aggcatgtct ctgagcttct
     4561 atacctgctc aaggtcagtg tcatctttgt gtttagctca tccaaaggtg ttaccctggt
     4621 ttcaatgaac ctaacctcat tctttgtgtc ttcagtgttg gcttgtttta gctgatccat
     4681 ctgtaacaca ggagggatcc ttggctgagg attgtatttc agaaccacca actgctcttg
     4741 acaattgtta acccgctagg ctcctttggt tagagaagcc acagtccttc agcctccaat
     4801 tggtgtcagt acttaggaag accacagcta gatggacaaa cagcattggg aggccttagc
     4861 cctgctcctc tcaattccat cctgtagaga acaggagtca ggagccgctg gcaggagaca
     4921 gcatgtcacc caggactctg ccggtgcaga atatgagcaa tgccatgttc ttgcagaaaa
     4981 cgcttagcct gagtttcata ggaggtaatc accagacaac tgcagaatgt agaacactga
     5041 gcaggacaac tgacctgtct ccttcacata gtccatatca ccacaaatca cacaacaaaa
     5101 aggagaagag atattttggg ttgaaaaaaa gtaaaaagat aatgtagctg catttcttta
     5161 gttattttga accccaaata tttcctcatc tttttgttgt tgtcatggat ggtggtgaca
     5221 tggacttgtt tatagaggac aggtcagctg tctggctcaa tgatctacat tctgaagttg
     5281 tctgaaaatg tcttcataat taaattcagc ctaaactttt tgacgggaac actgcagaga
     5341 caatgctgtg agtttccaac ctcagcccat ctgcgggcag agaaggtcta gtttgtccaa
     5401 caccattatg atatcaggac tggttacttg gttaaggagg ggtctaggag atctgtccct
     5461 tttagagaca ccttacttat aatgaagtac ttgggaaagt ggttttcaag agtataaata
     5521 tcctgtattc taatgatcat cctctaaaca ttttatcatt tattaatcct ccctgcctgt
     5581 gtctattatt atattcatat ctctacgctg caaattttgg gtctcaattt ttactgtgcc
     5641 tttgttttta ctagtgtctg ctgttgcaaa aagaagaaaa cattctttgc ctgagtttta
     5701 atttttgtcc aaagttaatt ttaatctata caattaaaac cttttgccta tca
//
