LOCUS       NM_001012643            1896 bp    mRNA    linear   PRI 01-JUN-2024
DEFINITION  Homo sapiens Myb related transcription factor, partner of profilin
            (MYPOP), mRNA.
ACCESSION   NM_001012643 XM_290848
VERSION     NM_001012643.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Lederer,M., Jockusch,B.M. and Rothkegel,M.
  TITLE     Profilin regulates the activity of p42POP, a novel Myb-related
            transcription factor
  JOURNAL   J Cell Sci 118 (Pt 2), 331-341 (2005)
   PUBMED   15615774
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC008623.4, BC044311.1 and BU196283.1.
            
            On Nov 22, 2018 this sequence version replaced NM_001012643.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR3476690.448367.1,
                                           SRR3476690.560009.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2162946 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000322217.6/ ENSP00000325402.4
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 AC008623.4         53704-53712
            10-548              BC044311.1         1-539
            549-549             BU196283.1         432-432
            550-989             BC044311.1         541-980
            990-990             AC008623.4         65388-65388
            991-1896            BC044311.1         982-1887
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.32"
     gene            1..1896
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /note="Myb related transcription factor, partner of
                     profilin"
                     /db_xref="GeneID:339344"
                     /db_xref="HGNC:HGNC:20178"
                     /db_xref="MIM:617861"
     exon            1..44
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /inference="alignment:Splign:2.1.0"
     exon            45..595
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /inference="alignment:Splign:2.1.0"
     CDS             97..1296
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /note="p42 Myb-related transcription factor, partner of
                     profilin; myb-related protein p42POP"
                     /codon_start=1
                     /product="myb-related transcription factor, partner of
                     profilin"
                     /protein_id="NP_001012661.1"
                     /db_xref="CCDS:CCDS33055.1"
                     /db_xref="GeneID:339344"
                     /db_xref="HGNC:HGNC:20178"
                     /db_xref="MIM:617861"
                     /translation="MASAAAGEAEETTRLRKPRFSFEENQILIREVRAHYPQLYGAQS
                     RRVSVAERRRVWDGIAAKINGITSWKRTGQEVQKRWNDFKRRTKEKLARVPHSTQGAG
                     PAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSSQPPPPSACPQRYVLSEDR
                     REDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQPVQLPRLAL
                     SPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSASDPSLDFLRAQQETANAIREL
                     AGTLRQGLAKLSEALSALLPLLPGTPVDSLPPPLPPPPPPPPPPRPVLPPPAPKVEIT
                     PEPVSVVAAVVDGAVVAARGVIIAPRSEEGAPRPPPAPLPPHDSPPHKRRKGFPTRKR
                     RGRWKSP"
     exon            596..1896
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1875..1880
                     /regulatory_class="polyA_signal_sequence"
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /note="hexamer: AATAAA"
     polyA_site      1896
                     /gene="MYPOP"
                     /gene_synonym="P42pop"
                     /note="major polyA site"
ORIGIN      
        1 gcagaagccc gagccctgac ccaccggcgg ctgcggcgga gccgcgccgg cgccccccat
       61 gcgccagacg gcaggacggc ggcgtcgggg ggcgccatgg cctcggcggc ggcgggcgaa
      121 gcggaggaaa ccacccggtt gcgcaagccg cgcttctcat tcgaagagaa ccagatcctg
      181 atccgcgagg tgcgcgccca ctacccgcag ctctacggcg cgcagagccg tcgggtgagc
      241 gtggcagagc ggcggcgcgt gtgggacggc atcgccgcca agatcaacgg tatcaccagc
      301 tggaagcgca cgggccagga ggtgcagaag cgctggaacg acttcaagcg ccgcaccaag
      361 gagaagctcg ctcgcgtgcc gcactccacg cagggcgccg ggcccgccgc ggaggacgct
      421 ttctccgcgg aagaggagac catttttgcc atcctggggc caggtgtggc ggcgccgggg
      481 gcaggtgctg gggcggagga gccccctgcg gccccctctt cacagccgcc gcccccaagc
      541 gcctgccctc agcgctacgt gttgtcggaa gaccgccggg aggaccgacg tgcagataca
      601 tcagcccaca gcaaggcggg ctccagcagc ccggagccat gggcccggcc ctcctgcact
      661 ccccaggaag ggggctgccc acggcccaag gagcgtgagt caccaccccc ttcggccctg
      721 cagccggtcc agctgcctcg cctggccttg tctccaccac ccccagcccc tccactgcca
      781 cccccaccgc cactggccca agtggcaccc tcacccccta gccccccacc ccctcctcgg
      841 cctccaccca cgctctcggc ctcagacccc tccctggact tcctgcgggc ccagcaggag
      901 actgccaacg ccatccggga gctggccggc acccttcgac agggactggc caaactgagc
      961 gaggccctca gcgctctgct gccccttctg ccaggaaccc cagttgactc cctgcctcca
     1021 cctctgcccc cacccccacc cccaccgcca cctcccaggc ctgtcctgcc cccaccggcc
     1081 cccaaggtgg agatcacccc agagcccgtg tccgtggtgg ctgctgtggt ggacggggca
     1141 gtggtggcag ccaggggagt gatcattgcc ccaaggagcg aggagggggc accccggccc
     1201 cccccagccc cgctccctcc gcacgactcc cccccacaca agcggagaaa aggtttccct
     1261 acacggaaaa ggcgcggccg atggaaatct ccgtgaaatc tactatctat gatcctgcct
     1321 gcaacccctc tccccagctt ggcgcagtcg aggggggcga tgctctctgc ccatcccagc
     1381 tgcaccctag ctccctgctc cagggatgtg agcacccact ccctgtgcta gttagtgcct
     1441 gattctctgg ggggggcctc agtaatgggc ccccccaacc cctttctctg gtacagtgct
     1501 gtctgcctgg ctgcctccct taaccctgac ttctaagcca tcaatttcat gttatttatt
     1561 attgccctat gtggggtggg gagggaacct ctcgggtctg cacatctccc cttccctaac
     1621 agttcctgtt cttgacttga agagaattga cccgtggggg actccccacc tccccaaccc
     1681 agactttgga gcgggtggga gttgtaagac aaatcaaaat acggatgaca aagaggatat
     1741 agccgtgtat accccaggga gaggaggcgc cgagttctga tgggagaggt acaggttggg
     1801 ttctctgcct accattgctg tctctgactt ccagagctca accccctcct ttctcccagt
     1861 ggtgacaaga tatcaataaa cttattttta atacaa
//
