LOCUS       XM_047429967            2750 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens mucin 8 (MUC8), transcript variant X1,
            mRNA.
ACCESSION   XM_047429967
VERSION     XM_047429967.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; corrected model.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 6 indels
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-648               AC079031.39        44999-45646         c
            649-741             AC079031.39        44470-44562         c
            742-903             AC079031.39        44307-44468         c
            904-942             AC079031.39        44267-44305         c
            943-981             AC079031.39        44227-44265         c
            982-1020            AC079031.39        44187-44225         c
            1021-1263           AC079031.39        43943-44185         c
            1264-2750           AC079031.39        42455-43941         c
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..2750
                     /gene="MUC8"
                     /note="mucin 8; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: deleted 6 bases in
                     6 codons; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 1 Protein, and 86%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100129528"
                     /db_xref="HGNC:HGNC:7519"
                     /db_xref="MIM:601932"
     CDS             232..1398
                     /gene="MUC8"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 6 bases in 6 codons"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: S-antigen protein isoform
                     X1"
                     /protein_id="XP_047285923.1"
                     /db_xref="GeneID:100129528"
                     /db_xref="HGNC:HGNC:7519"
                     /db_xref="MIM:601932"
                     /translation="MKWTRAPQILTWVSSEPVWLRVAPFWGCLFLQQMMPALTEPVHV
                     HHELPTSSPGRDPGPRAAHVLSRKGPGSTSCPRPLQEGTPGSRAAHALSRRGHRVHEL
                     PTSSPGGDTGFMSCPRPFQEGTPGSRAAHVLSRRGHRGPRVHELPTSSPGRDPGSTSC
                     PRPLQEGTRVTNCPRPLQEGTPGSRAAHVLSRRGHRVHELPTPSPGRDPGFMSCPRPL
                     QEGTRVTNCPRPLQEGTRVTSCPRRLQEGTRVTSCPRPLQEGTRVTNCPRALQEGTPG
                     SRAAHALSRKGPRVHELPTSSPGGDTGFTSCPRPLQEGTPGSRAAHALSRRGHRVHEL
                     PTSSPGRDPGHELPTSSPGGDTGFTSCPRTFQEGTPGSGLLPAHIVPLCKSEER"
     polyA_site      2750
                     /gene="MUC8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtgttgttt ccggaggcgc ctaagtgatc ccgcagcgac tctgaggagg accctgaggg
       61 tcgggcattc ttgccctgac cggcctctgc tggacgccca ccggggaatc agggagatac
      121 acggggcccc ggcttccagg agcgcagcca ggccacagcc ctgaggacgg gcaaacccac
      181 ccaggcgcgg tgagagggag gccgcccagg cctggggcct ggcggcaggg gatgaagtgg
      241 accagagccc cgcaaatcct aacgtgggtg agcagtgagc ctgtgtggct gcgagtggct
      301 ccgttttggg gctgtttgtt cctgcagcaa atgatgccag ccctgacgga accagtgcac
      361 gtccaccacg agctgcccac gtcctctcca ggaagggacc cgggtccacg agctgcccac
      421 gtcctctcca ggaagggacc cgggtccacg agctgcccac gtcctctcca ggaggggaca
      481 ccgggttcac gagctgccca cgccctctcc aggaggggac accgggttca cgagctgccc
      541 acgtcctctc caggagggga caccgggttc atgagctgcc cacgcccttt ccaggaaggg
      601 accccgggtt cacgagctgc ccacgtcctc tccaggaggg gacaccgggg accccgggtt
      661 cacgagctgc ccacgtcctc tccaggaagg gaccccgggt ccacgagctg cccacgtcct
      721 ctccaggaag ggacccgggt cacgaactgc ccacgtcctc tccaggaagg gaccccgggt
      781 tcacgagctg cccacgtcct ctccaggagg ggacaccggg ttcacgagct gcccacgccc
      841 tctccaggaa gggaccccgg gttcatgagc tgcccacgtc ctctccagga agggacccgg
      901 gtcacgaact gcccacgccc tctccaggag gggacccggg tcacgagctg cccacgtcgt
      961 ctccaggaag ggacccgggt cacgagctgc ccacgtcctc tccaggaagg gacccgggtc
     1021 acgaactgcc cacgcgctct ccaggagggg acaccgggtt cacgagctgc ccacgccctc
     1081 tccaggaagg gaccccgggt tcacgagctg cccacgtcct ctccaggagg ggacaccggg
     1141 ttcacgagct gcccacgtcc tctccaggag gggacaccgg gttcacgagc tgcccacgcc
     1201 ctctccagga ggggacaccg ggttcacgag ctgcccacgt cctctccagg aagggacccg
     1261 ggtcacgagc tgcccacgtc ctctccagga ggggacaccg ggttcacgag ctgcccacgc
     1321 actttccagg aagggacccc gggttcaggt ctcctgccgg cccacatcgt gcctttgtgt
     1381 aaatcagaag aaagatgagg aacaggccct cctctctctc caggcaggct ttggtggagg
     1441 ggctggatct cctgccgcac cttccctggc agggcaccct gtgcttgagc cccagaactg
     1501 caggcggccg gcagagaagg ggtccatgat ggcgcctcgg tgcgcagcct tggacctgcc
     1561 cccatggacc tgggtgagga cttcccagcc cttccccggc tccagctgct ctccctaagg
     1621 gccgcctcac cccttcctcg ggcagggggc agtggacgag ggttccgtcc ctccagggga
     1681 tgctcccaaa cccctgccag gacttggcag atccggcctc tcatcttggc agctagatgg
     1741 tgggacggga tcatcgtggt ggctttaatt tgcatttctc tgatgactga tgatttcgag
     1801 catctcttca tatgtttgct ggctttgggg atagagatat ttcttcctaa agcaaaactt
     1861 gattatgtca tttctgcttc aagatgccag tgatgcctga ggtctgcagg gcagtgcaga
     1921 cgctcaccgc ctggccgctc aggagcctgt gcttgacccc caaatccgcc ccccaactcc
     1981 ctgttaccgg ctcactcctt ccatgagggg ccttccccag ggacagccga tgctctcctg
     2041 atggctcctg cccttgcaga gtgctgcccc cgcctgccca cctggcctgg accctcgcct
     2101 gagccccctc agggctctgc gccacctcaa cccaggcgtt tgttccgcag gaacctcccg
     2161 gctcttccca ctcgggaaag gaaggctctg ggcatggagg tcggccaggc cccatccccg
     2221 taccctggcc cttcttcctg cttcctgttt gtcactgccc cggggccttt gcacctgcat
     2281 tccctctctc tgtgagtgtc ctggggcccg ttacccacgt caccgtccca ggataccttt
     2341 tcttttcttt ctctctctcc agctttattg aggtatagtt gacaattcag gacggtgtgc
     2401 actcaaggta tgcagcatca caacctgaca cacgtaggca ttgtgaaatg agtcccacaa
     2461 ttgggctaat taacacaccc atcaccttac atggttactt ctttctgtgg tgagaacact
     2521 aaattttaaa tagaggacac acagcctggg caacatagtg agaccctgtc tctacaaata
     2581 taaaaaaatt atctggacgt ggtggtgcac acctgtggtc ccagctactt gggaagctga
     2641 ggctggagaa tcacttgagc ctgggaggcg gaggttgcgg tgcactccag cctgggcgac
     2701 agagggaggc cctatctcaa aataaataaa taaaggacac attcttatca
//
