LOCUS       NM_001351281            2052 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens MINDY family member 4B (MINDY4B), mRNA.
ACCESSION   NM_001351281
VERSION     NM_001351281.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Vastinsalo,H., Jalkanen,R., Dinculescu,A., Isosomppi,J., Geller,S.,
            Flannery,J.G., Hauswirth,W.W. and Sankila,E.M.
  TITLE     Alternative splice variants of the USH3A gene Clarin 1 (CLRN1)
  JOURNAL   Eur J Hum Genet 19 (1), 30-35 (2011)
   PUBMED   20717163
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC020636.14 and AC016142.22.
            
            On Dec 13, 2018 this sequence version replaced NM_001351281.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA2148093, SAMEA2148874
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000465419.7/ ENSP00000491923.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               AC020636.14        5533-5645           c
            114-141             AC020636.14        5268-5295           c
            142-309             AC020636.14        3455-3622           c
            310-429             AC016142.22        5494-5613
            430-521             AC016142.22        6384-6475
            522-687             AC016142.22        8696-8861
            688-753             AC016142.22        9414-9479
            754-824             AC016142.22        14361-14431
            825-897             AC016142.22        16027-16099
            898-1059            AC016142.22        16741-16902
            1060-1240           AC016142.22        26432-26612
            1241-2052           AC016142.22        28612-29423
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3q25.1"
     gene            1..2052
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /note="MINDY family member 4B"
                     /db_xref="GeneID:646951"
                     /db_xref="HGNC:HGNC:35475"
     CDS             1..1383
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /note="protein FAM188B2; family with sequence similarity
                     188 member B2; putative UPF0526 protein B; epididymis
                     secretory sperm binding protein"
                     /codon_start=1
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     MINDY-4B"
                     /protein_id="NP_001338210.2"
                     /db_xref="CCDS:CCDS93407.1"
                     /db_xref="GeneID:646951"
                     /db_xref="HGNC:HGNC:35475"
                     /translation="MDMEVLGQEQSSEQLDLEEISRKISFLDKWREIFSYHRLGTNNS
                     TPQNHEGNHTSADENEDGTGLSQPKGQGHLPSSGLCSIPNPSIISSKLGGFPISLAMA
                     TKLRQILFGNTVHVFSYNWKKAYFRFHDPSSELAFTLEVGKGGARSIQMAVQGSIIKY
                     LLFTRKGKDCNLGNLCEISKKEQEQALAAALAGILWAAGAAQKATICLVTEDIYVAST
                     PDYSVDNFTERLQLFEFLEKEAAEKFIYDHLLCFRGEGSHGVILFLYSLIFSRTFERL
                     QMDLDVTTTQLLQPNAGGFLCRQAVLNMILTGRASPNVFNGCEEGKSQETLHGVLTRS
                     DVGYLQWGKDASEDDRLSQVGSMLKTPKLPIWLCNINGNYSILFCTNRQLLSDWKMER
                     LFDLYFYSGQPSQKKLVRLTIDTHSHHWERDQQEEKHGPRRRFSPVEMAIRTKWSEAT
                     INWNGTVPFF"
     exon            1..113
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            114..141
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            142..309
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            310..429
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            430..521
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            522..687
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            688..753
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            754..824
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            825..897
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            898..1059
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            1060..1240
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
     exon            1241..2052
                     /gene="MINDY4B"
                     /gene_synonym="C3orf76; FAM188B2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatatgg aggtcttggg ccaggaacaa agctccgaac agctggattt agaggagatc
       61 tcaaggaaaa tttcattcct tgacaaatgg agggaaatct ttagttatca caggttggga
      121 accaataatt caactcctca gaatcatgaa ggcaaccata catctgctga tgaaaatgaa
      181 gatggaacag gactatctca gcccaaagga caaggacatt tgccatcaag tggcctttgt
      241 tctattccca acccctctat catctcttca aaattgggtg gctttcctat ctccctagca
      301 atggccacga agctgcggca gatcctgttt ggaaacacag tccatgtctt tagctataac
      361 tggaaaaagg cctatttcag gttccatgat ccttcttctg aactagcttt cactctggaa
      421 gtgggaaagg gaggggcccg aagcattcag atggctgtgc aaggatccat catcaaatac
      481 ttgttgttta ccaggaaagg aaaagactgt aaccttggca acttatgtga aataagcaag
      541 aaggagcagg agcaagcctt ggccgcggcg cttgctggca tcctgtgggc tgcaggagca
      601 gctcagaagg ccaccatctg tcttgtcact gaggacattt acgttgcgtc gactccggac
      661 tactctgtgg acaatttcac tgagcgactc cagctgtttg aatttttaga gaaagaagcc
      721 gctgagaaat tcatctacga tcacttacta tgtttcagag gggaaggaag ccatggtgtc
      781 atcctgtttc tgtacagcct gatcttctct agaacatttg aaaggcttca aatggaccta
      841 gatgtcacca ccactcagct gctacaacca aatgctggag gctttctgtg caggcaggca
      901 gttctgaaca tgattttaac tggaagagca agtcccaatg tcttcaatgg ctgtgaggaa
      961 ggaaagtctc aggaaacact acatggagtc ctgacccgca gtgatgttgg ctatttgcag
     1021 tggggtaagg atgcctcgga agatgacaga ctctcacagg tgggcagcat gctgaagact
     1081 cccaaattac ctatttggct gtgcaacatc aatggaaatt acagcatcct tttttgcaca
     1141 aacaggcagc tcttatcaga ctggaaaatg gaacgtctct ttgatctgta cttttacagt
     1201 ggccaaccct cacagaaaaa gcttgtgcgt cttacaatag atactcactc ccatcactgg
     1261 gaaagagacc aacaggaaga gaaacatgga ccaagacgac ggttttcacc agtggagatg
     1321 gcaatcagaa ccaagtggag cgaggccacc atcaactgga atgggaccgt tcccttcttc
     1381 taaagggaaa ctaggctgtg caatgaagtc tgaagtgtca gaactgctgg gatgcaaaag
     1441 cctaatgtgg gggagaccaa tcgtttccat atttctcatt cacaagcccc accaaaaaat
     1501 atatatatat accattagca gttttttcat tttttaagtc tctggtaaat ccctagctgt
     1561 cagcattgta ggagaaacac aggcccccac accagggcct gcatggtgcc tcctccgtag
     1621 tcacatagac tggtttcttt cttttattca aaagagaaaa tgaagcctct ctcttgcatg
     1681 tttttccaaa gttgtctttt cttggtataa ctctccatga ggattacgga agcaggctgc
     1741 tagctttcat ttggggatga agtcattggt aatgcatcat cggattttta gttatggcaa
     1801 gaactcaagc cttctcaagg acttcctggt atggacggca ttcctttcca aggatacagt
     1861 tcatatgccc acattagcaa gttcttgtca ttaaaatagt aaatgggctt cttggggttt
     1921 gaagcagggg ttattcctgg taggctgaca gctatagcag ttgacatgtg ggtttcagta
     1981 gccacaagga gacattcttt ttattagcag tatgtttgtt tcttttcttc aatgctggat
     2041 ataaatacac aa
//
