LOCUS       NM_001136507             778 bp    mRNA    linear   PRI 16-FEB-2024
DEFINITION  Homo sapiens methyl-CpG binding domain protein 3 like 5 (MBD3L5),
            mRNA.
ACCESSION   NM_001136507 XM_208203
VERSION     NM_001136507.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Grimwood,J., Gordon,L.A., Olsen,A., Terry,A., Schmutz,J.,
            Lamerdin,J., Hellsten,U., Goodstein,D., Couronne,O.,
            Tran-Gyamfi,M., Aerts,A., Altherr,M., Ashworth,L., Bajorek,E.,
            Black,S., Branscomb,E., Caenepeel,S., Carrano,A., Caoile,C.,
            Chan,Y.M., Christensen,M., Cleland,C.A., Copeland,A., Dalin,E.,
            Dehal,P., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Garcia,C., Georgescu,A.M., Glavina,T., Gomez,M.,
            Gonzales,E., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Ho,I.,
            Huang,W., Israni,S., Jett,J., Kadner,K., Kimball,H., Kobayashi,A.,
            Larionov,V., Leem,S.H., Lopez,F., Lou,Y., Lowry,S., Malfatti,S.,
            Martinez,D., McCready,P., Medina,C., Morgan,J., Nelson,K.,
            Nolan,M., Ovcharenko,I., Pitluck,S., Pollard,M., Popkie,A.P.,
            Predki,P., Quan,G., Ramirez,L., Rash,S., Retterer,J., Rodriguez,A.,
            Rogers,S., Salamov,A., Salazar,A., She,X., Smith,D., Slezak,T.,
            Solovyev,V., Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N.,
            Wagner,M., Wheeler,J., Wu,K., Xie,G., Yang,J., Dubchak,I.,
            Furey,T.S., DeJong,P., Dickson,M., Gordon,D., Eichler,E.E.,
            Pennacchio,L.A., Richardson,P., Stubbs,L., Rokhsar,D.S.,
            Myers,R.M., Rubin,E.M. and Lucas,S.M.
  TITLE     The DNA sequence and biology of human chromosome 19
  JOURNAL   Nature 428 (6982), 529-535 (2004)
   PUBMED   15057824
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010606.7.
            
            On Aug 14, 2020 this sequence version replaced NM_001136507.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148874 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000329753.5/ ENSP00000331435.4
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                AC010606.7         94504-94582         c
            80-778              AC010606.7         92149-92847         c
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.2"
     gene            1..778
                     /gene="MBD3L5"
                     /note="methyl-CpG binding domain protein 3 like 5"
                     /db_xref="GeneID:284428"
                     /db_xref="HGNC:HGNC:37204"
     exon            1..79
                     /gene="MBD3L5"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..661
                     /gene="MBD3L5"
                     /note="MBD3-like protein 5"
                     /codon_start=1
                     /product="putative methyl-CpG-binding domain protein
                     3-like 5"
                     /protein_id="NP_001129979.1"
                     /db_xref="CCDS:CCDS45942.1"
                     /db_xref="GeneID:284428"
                     /db_xref="HGNC:HGNC:37204"
                     /translation="MGEPAFTSFPSPPVLGKLKRNMMPWALQKKREIHMAKAHRRRAA
                     RSALPMRLTSCIFRRPVTRIRSHPDNQVRRRKGDEHLEKPQQLCAYRRLQALQPCSSQ
                     GEGSSPLHLESVLSILAPGTAGESLDRAGAERVRIPLEPTPGRFPAVAGGPTPGMGCQ
                     LPPPLSGQLVTPADIRRQARRVKKARERLAKALQADRLARQAEMLTGG"
     exon            80..778
                     /gene="MBD3L5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caagagtggg gtcagcaaga gaaactctac ggctatggga gagcctgcgt tcacctcttt
       61 tccgagccca cctgttctgg ggaagctcaa aagaaacatg atgccctggg ctttacagaa
      121 gaaacgagaa atccacatgg ccaaggccca tcggagacga gctgcgaggt ctgctctccc
      181 catgagactc accagctgca tcttccggag gccggtgaca aggatcaggt ctcatcctga
      241 caaccaggtc agacgcagaa aaggggacga gcacctggag aagccgcagc aactctgcgc
      301 ctaccggaga ctgcaggccc tgcagccctg cagcagccaa ggagaaggtt caagtccact
      361 gcatttggag agcgtcttaa gtatccttgc accggggacg gccggtgaat ctctggacag
      421 agctggtgct gagcgtgtgc gcatcccgct tgagcccacc cctgggcggt ttccagctgt
      481 ggcagggggg ccaaccccag gaatgggttg tcagctccca ccgcccctct ctggccaatt
      541 ggtgactcct gcagatatcc ggagacaggc caggagggtg aagaaagcca gggagagact
      601 ggccaaggcc ttgcaggcag acaggctggc caggcaggca gaaatgctga caggtgggtg
      661 aagctcagtc ctgggctttc ggtccctttc ttttaatgcc catcctcatt cctactctga
      721 attgtcacac ttttcccttc cccaccagtt ctttaataaa agtatttgaa aggcaaca
//
