LOCUS       NM_001164425             813 bp    mRNA    linear   PRI 08-APR-2024
DEFINITION  Homo sapiens methyl-CpG binding domain protein 3 like 3 (MBD3L3),
            mRNA.
ACCESSION   NM_001164425 XM_928697
VERSION     NM_001164425.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Grimwood,J., Gordon,L.A., Olsen,A., Terry,A., Schmutz,J.,
            Lamerdin,J., Hellsten,U., Goodstein,D., Couronne,O.,
            Tran-Gyamfi,M., Aerts,A., Altherr,M., Ashworth,L., Bajorek,E.,
            Black,S., Branscomb,E., Caenepeel,S., Carrano,A., Caoile,C.,
            Chan,Y.M., Christensen,M., Cleland,C.A., Copeland,A., Dalin,E.,
            Dehal,P., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Garcia,C., Georgescu,A.M., Glavina,T., Gomez,M.,
            Gonzales,E., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Ho,I.,
            Huang,W., Israni,S., Jett,J., Kadner,K., Kimball,H., Kobayashi,A.,
            Larionov,V., Leem,S.H., Lopez,F., Lou,Y., Lowry,S., Malfatti,S.,
            Martinez,D., McCready,P., Medina,C., Morgan,J., Nelson,K.,
            Nolan,M., Ovcharenko,I., Pitluck,S., Pollard,M., Popkie,A.P.,
            Predki,P., Quan,G., Ramirez,L., Rash,S., Retterer,J., Rodriguez,A.,
            Rogers,S., Salamov,A., Salazar,A., She,X., Smith,D., Slezak,T.,
            Solovyev,V., Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N.,
            Wagner,M., Wheeler,J., Wu,K., Xie,G., Yang,J., Dubchak,I.,
            Furey,T.S., DeJong,P., Dickson,M., Gordon,D., Eichler,E.E.,
            Pennacchio,L.A., Richardson,P., Stubbs,L., Rokhsar,D.S.,
            Myers,R.M., Rubin,E.M. and Lucas,S.M.
  TITLE     The DNA sequence and biology of human chromosome 19
  JOURNAL   Nature 428 (6982), 529-535 (2004)
   PUBMED   15057824
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010606.7.
            
            On Feb 25, 2021 this sequence version replaced NM_001164425.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.77520.1, BX113115.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148874
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000333843.9/ ENSP00000333183.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-116               AC010606.7         66484-66599
            117-813             AC010606.7         68257-68953
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.2"
     gene            1..813
                     /gene="MBD3L3"
                     /note="methyl-CpG binding domain protein 3 like 3"
                     /db_xref="GeneID:653657"
                     /db_xref="HGNC:HGNC:37205"
     exon            1..116
                     /gene="MBD3L3"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..698
                     /gene="MBD3L3"
                     /note="MBD3-like 3; MBD3-like protein 3"
                     /codon_start=1
                     /product="putative methyl-CpG-binding domain protein
                     3-like 3"
                     /protein_id="NP_001157897.1"
                     /db_xref="CCDS:CCDS45944.1"
                     /db_xref="GeneID:653657"
                     /db_xref="HGNC:HGNC:37205"
                     /translation="MGEPAFTSFPSPPVLGKLKRNMMPWALQKKREIHMAKAHRRRAA
                     RSALPMRLTSCIFRRPVTRIRSHPDNQVRRRKGDEHLEKPQQLCAYRRLQALQPCSSQ
                     GEGSSPLHLESVLSILAPGTAGESLDRAGAERVRSPLEPTPGRFPAVAGGPTPGMGCQ
                     LPPPLSGQLVTPADIRRQARRVKKARERLAKALQADRLARQAEMLTCR"
     exon            117..813
                     /gene="MBD3L3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgcatttt ccggcaagcc aagggttgtc tgcatctcaa gagtggggtc agcaagagaa
       61 actctacggc tatgggagag cctgcgttca cctcttttcc gagcccacct gttctgggga
      121 agctcaaaag aaacatgatg ccctgggctt tacagaagaa acgagaaatc cacatggcca
      181 aggcccatcg gagacgagct gcgaggtctg ctctccccat gagactcacc agctgcatct
      241 tccggaggcc ggtgacaagg atcaggtctc atcctgacaa ccaggtcaga cgcagaaaag
      301 gggacgagca cctggagaag ccgcagcaac tctgcgccta ccggagactg caggccctgc
      361 agccctgcag cagccaagga gaaggttcaa gtccactgca tttggagagc gtcttaagta
      421 tccttgcacc ggggacggcc ggtgaatctc tggacagggc tggtgctgag cgtgtgcgca
      481 gcccgcttga gcccacccct gggcggtttc cagctgtggc aggggggcca accccaggaa
      541 tgggttgtca gctcccaccg cccctctctg gccaattggt gactcctgca gatatccgga
      601 gacaggccag gagggtgaag aaagccaggg agagactggc caaggccttg caggcagaca
      661 ggctggccag gcaggcagaa atgctgacat gtagatgaag cgcagtcctg ggctttcggt
      721 ccctttcttt taatgcccat cctcattcct actctgaatt gtcacacttt tcccttcccc
      781 accagttctt taataaaagt atttgaaagg caa
//
