LOCUS       XM_011521245            2629 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens LysM domain containing 4 (LYSMD4),
            transcript variant X8, mRNA.
ACCESSION   XM_011521245
VERSION     XM_011521245.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000015.10) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011521245.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     gene            1..2629
                     /gene="LYSMD4"
                     /note="LysM domain containing 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:145748"
                     /db_xref="HGNC:HGNC:26571"
     CDS             2..526
                     /gene="LYSMD4"
                     /codon_start=1
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 4 isoform X7"
                     /protein_id="XP_011519547.1"
                     /db_xref="GeneID:145748"
                     /db_xref="HGNC:HGNC:26571"
                     /translation="MFVANPQARWQLRVAGRGSRVAGRRSRRSLGAEVADIKKVNNFI
                     REQDLYALKSVKIPVRNHGILMETHKELKPLLSPSSETTVTVELPEADRAGAGTGAQA
                     GQLMGFFKGIDQDIERAVQSEIFLHESYCMDTSHQPLLPAPPKTPMDGADCGIQWWNA
                     VFIMLLIAAFALVS"
     polyA_site      2629
                     /gene="LYSMD4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatgttcgta gccaatccgc aggcgcggtg gcagctgcgg gtcgcgggtc gcgggtcgcg
       61 agtcgccggt cgccggtcgc ggcggagcct gggcgctgag gttgcagata tcaagaaagt
      121 caacaacttc atcagagaac aagacttata tgctttgaaa tctgttaaga ttccagtgag
      181 aaaccatggg atcctgatgg agacccacaa agaactgaaa ccccttctga gcccgtcttc
      241 cgagaccaca gtgaccgtgg aactgccaga ggcagacaga gcaggcgcgg gcaccggtgc
      301 ccaggccggc caactgatgg gcttctttaa ggggattgac caggatattg agcgtgcagt
      361 gcagtcagaa atctttctac atgaaagtta ctgcatggac acctcccatc agccactgct
      421 cccggcacct ccgaagacgc ctatggatgg tgcagattgt ggcattcagt ggtggaatgc
      481 tgttttcatc atgctgctga ttgctgcgtt tgctttggtt agctagaaag caggcccatc
      541 atgcatctgt aagaaagtga ctggagtgta ggccctggcg tctaagccga gtaagatgcc
      601 ctgtcaatct gggtcctctg ggaagcaaga ctgatgaaat gaggagcacc aaagctttac
      661 accccagcta tgtgcatttg gggctggggc tgcctgggaa gagctcgtcc tcagcccaaa
      721 gcctgcaaca gctgggatca gggcttacct ctcacagacg gggctcagca actttctgcg
      781 ggatgaggac acaagcccac ttgacctgga acgtctgaaa cctcctggcc ccgtggaaga
      841 tgggaagaaa cactcctctt cctctcagtt ttacaaccga gtggtcctcg ggctgcttgt
      901 gagcaccgga cgaccgaccg agcaggctgc agccaatcag ctggcacagg gctccgactg
      961 aaaatcatct tggctggtgc cacagaatcg gcctgaaaac aggatactgc ctagagcaag
     1021 gcacccaggg gagccaagca ggaaaatgta atgaattgac tttaagtagc tgcagctgtg
     1081 attagagtat ttttagccac aggactcaac cagctttcaa aacctgctaa taagagcccc
     1141 accgtagcca gcgcaaaaat ttagttttca gtttaacacc aggaatctgc ttagctagga
     1201 gctggcttag aaggcacatc aggagagaac atcttctact gaaagttgaa gatttttcat
     1261 tttctagctg aattatgaca aagggagatg accattaagt gcctgccagc atactgggac
     1321 gtacacctaa cactctgaaa actcaattca tgccagcaca tctgtcttct gctgcatcta
     1381 gctcagcatc atgtatgtat tttgggcaaa actaatcatt tcacacccta gactttaaag
     1441 agacccagaa tctaatgata gctaacatac ccaccccctc taacaggctt tggcgtattt
     1501 cctgtgagaa gcagttactg gaggccgaat ggattccact catccacagc actgtgcatg
     1561 caacagccag attaggcccc ggtgggactg cgtggcccac tgcttcctat gggctccagg
     1621 gctgcccagc agggatgacc cgggagccga caagggggag gccagtgggg gcgttgggac
     1681 ggtttccttg accctgtctc aacccagaga aagaagcctg caggtgaaaa aggtcttcgt
     1741 gaaaggaatg aaaaaggaga gggctttagg ggaaggggct gcctggtggc aaagccagcg
     1801 ccttgtgtcc ccaggcaaac atgacagagt ctcgacgcac aggaagagcc agtccgtctt
     1861 tactggagtg agtgcgggag acaaacagtt tacaacaacc tttagcattg tcttcaccat
     1921 ttgataaaaa gttcactatt atatttattg tataatgaag aaaaacaaca cattcaggga
     1981 aaaattgaga ttaacttatt tttcttaaaa ggttcatctc aaggatggca acaaagtcca
     2041 gcttgtgccg ccaaacggtt ttacatgatc aaaccgtgta cagcttcttg tgtgaactgt
     2101 tgactacaaa catttaccaa atacataaat ctcttttaaa aaagccattt taaatatagc
     2161 aaagcagtgt cttcttgcac agcaaagtga agaaagtttc tacagagaaa tagaagtttt
     2221 acatttgtaa aatctttttc acattctaat catctagctt aagatccaat gccaggagtt
     2281 ttcagcttcc ttatttacta tgtatttctt gtgcgcatga tggttaatac agaaattatg
     2341 ttgatgcatt actagttatc cttctagtta aaggaaaggg taaaacatgt attgttcttg
     2401 tagaacaaac ccctgattta gtctataaca aaatggacat aattgggctc aaaagatgga
     2461 gttttgattg ggaccacctg tgtacacaca acagtgactt ccactcgcgg tggagtggcc
     2521 attagagtac tgaggaagga cagctgttgg aaactgtact ttaaccagtg caatttaagc
     2581 tttttttgct tttgttcttt agtaataaaa tacttctgga gggataaaa
//
