LOCUS       XM_047446884            4285 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens extensin-like (LOC124908048), mRNA.
ACCESSION   XM_047446884
VERSION     XM_047446884.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4285
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..4285
                     /gene="LOC124908048"
                     /note="extensin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 103 long SRA reads, and
                     81% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:124908048"
     CDS             1..1098
                     /gene="LOC124908048"
                     /codon_start=1
                     /product="extensin-like"
                     /protein_id="XP_047302840.1"
                     /db_xref="GeneID:124908048"
                     /translation="MRKELPVDKGETEKFTSQDFLSKNKNMTFSHQFSTVKKKLKKRY
                     LGNNIWVLSCTESSQLTSFFVFGCTFPITSHSSNAKLCWPPTSFLLFCPCPAAAFCGF
                     PPRPPRLFASAAAAFCGFSPPPPRLFAPFRARRRRWFLPPRLFAPAAAAFCSFLPPPP
                     WLFVFCPRSRCFLPPLSGFLSPRLFTPVSAAFCRPSFLSPPPRLFAAFCPRRRRGFLP
                     PAAAVFLPPPPRLFAAAAFCSFLPPAAAALSPRRLGFLWFFAPAPAAFCPRGFFPPPP
                     RLFAAFCPRSRAFCSFLPQPPCLFAPAAAAFCPRRRGSEGGSGRLGCQLYWRPGKGTA
                     EGRSWSSSPVSGVPCLGARAPGSPPWPLWPA"
     polyA_site      4285
                     /gene="LOC124908048"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaggaaag agttacctgt ggataaagga gaaactgaaa aatttacaag tcaagacttt
       61 ttaagcaaaa acaaaaatat gacttttagt caccaattca gtacagtgaa aaaaaagttg
      121 aagaagagat atcttggaaa taacatctgg gttcttagct gcactgagtc aagccaactt
      181 acatctttct ttgtctttgg ctgcactttt cctatcacat cacactccag caatgccaag
      241 ttgtgctggc ctcctacctc atttctccta ttttgcccct gccccgccgc ggctttttgc
      301 ggctttccgc cccggccgcc gcggcttttt gcctccgccg ccgctgcttt ttgcggcttt
      361 tcgcccccgc cgccgcggct ttttgcgcct tttcgcgccc gccgccgccg ctggtttttg
      421 ccgccgaggc tctttgcccc cgccgccgcg gctttttgca gctttttgcc cccgccgccg
      481 tggctttttg tgttttgccc ccgctcccgc tgctttttgc cccctctcag cggctttttg
      541 tcgccgcggc tttttacccc cgttagcgcg gctttttgcc gccctagctt tttgtccccg
      601 ccgccgcggc tttttgcagc tttttgcccc cgccgccgcc gcggcttttt gcctcccgcc
      661 gccgcggttt ttttgccccc gccgccgcgg ctttttgccg ccgctgcttt ttgcagcttt
      721 ttgccccctg ccgccgcggc tctttcccct cgccgcctcg gctttctgtg gttttttgcc
      781 cccgctcccg ctgctttttg cccccgcggc tttttccccc cgccgccgcg gctttttgct
      841 gctttttgcc cccgcagccg tgctttttgc agctttttgc cccagccacc gtgccttttt
      901 gcccccgccg ccgcggcttt ttgtccccgc cgccgcggtt ctgagggcgg gagcggcaga
      961 ctcggctgcc agctctactg gcgtcctggt aagggcaccg ccgaggggcg ctcctggtcc
     1021 agctctcccg tctccggggt tccttgccta ggcgcccgcg ccccgggctc cccgccttgg
     1081 ccactgtggc ctgcatagag cggcgctgcg cggggaggct atgggagaga agaaggaggg
     1141 cgggggcggg ggtgatgggg tggcgcaggg gccgcggcca gccggacgct gcagcagtgc
     1201 gggcagctac agaagctcat cggcatctcc atcggcagcc tgcacgggct gcgcaccaag
     1261 tgcgctgtgt ccaacggcct cacccagcag gagatacgga ccctggaggt gaggccactg
     1321 aaggtctgag ggagaactga cttgtcagga actcctgtta aggagaatta acaaagtgtg
     1381 gttattaaag gagaactgag ttgggagtca gacctggagg actgcaccct tggttaagac
     1441 attataccac cttgagtctg gcctgttgac tgaagataca acagagaaat gcataatgtc
     1501 cactgaattt attaaagttc caaaatcggt cgcgcgcagt ggctcacgcc tgtaatctca
     1561 atacttcggc aggccgaggc gtgtggatca cgaggtcagg agttggaaac tagcctgacc
     1621 aacatggtga aaccccgtct ctactaaaaa tacgaaaatt agccaggcat ggtggcacgc
     1681 ggctgtaatc cccgctactc aggaggccga ggcaggagaa ttgctggaac ctgggaggca
     1741 gaggttgcag tgagcggaga tggcaccacc gcattccagc ctgggtgaaa gagtgagact
     1801 cctcctcaaa aaaaaaaaaa aaaaaaaaaa agttgcaaag tcatactcac ctttctgctc
     1861 ttgtcagaca attaaggggt cattgaatac ttcagcccta ataatttgct tcctaacata
     1921 catattgcag tgcttatcta attttaaata tctttttgtt tcaacaccta attttttatt
     1981 tagatctacc tgtatgttta ttttgctctg tattcattct ttgatttcag aacttcaacc
     2041 tttctgaagc atgttttcag agtttctttt tagtttcttt agtggaattc tgctggtggt
     2101 gctttgtttt ttctctctaa atatgttatt tagccatagg ttgatgaata tttttcttgg
     2161 ttgagaattt cagaatggca ttattattat taacaaataa tattttttat tttacctttc
     2221 attctttccg atttcaatat gattaaaggt aatttgattt ttctagtgct aattgaaata
     2281 tttttccctt cctgattctt tgctatttct ctaggagata cgtaggtgta ggtttatctc
     2341 cattgtagct tgcttagcat gcatggaatt tttcaatatg cggattagtg tcttacaaaa
     2401 gtctagagaa ctttcagcca aaataccatc acatattgtc ccttcccagt tcccttcttc
     2461 tatgagaaca ctcactaaac acatgctaca ctttctcacg gtatcttcct tgtctcttca
     2521 tgattctgtc cacattttgc atttttttaa attttctgtg atgcattgtg aaatatttat
     2581 taactctcac catggccatg tctaatctga tgagttcatt tttgagtttt taatttaaaa
     2641 tactatattt ttatacaagc tactttacaa attttctaca tcaatttttt agtctcctaa
     2701 aatatattct tttttaaaaa aaatttttta aagcaaatgt gctttataat ctaacagtga
     2761 tatttctact aatgaacctt tgtggatctg tttgtactct ttttctgctt tcctttcaaa
     2821 cggtggtata ccatttcctt gtgtacttag atgcctctga atgacaaata tttatttttc
     2881 tctgaaaatt atttttgtgc acttttgcgg attagtaaga agaaaatttg ccaaagagaa
     2941 tttgaatttt tttgtgagtc tactaaacgc accaccattc tgggaccaca ttatattaat
     3001 tcttggccta aaggtgtttg gacatatgtt tggactgcac atttaaacaa tttttaaatt
     3061 aattgctgta aatcattaat gattgaattt ctttaaatct gtccaatctc aatcattttt
     3121 atttgccatt tccagggaat gtgaaatggg actaatttac ctctgattct tctttatact
     3181 gaggatagaa actttggtcc tagctttagg gaggagctcc tgtgtgatgc cctatcttag
     3241 gaaaaactat gtatttcttt actgtcctat gtgatgtatg acagtaggaa tctgcactca
     3301 ttcattttgg tacatgtccg tagggcaaaa tcagtttcgg tgtttaggta tattttgtct
     3361 gctccctgca ttcccatggt tttgacctta tattttactt ttttttgtga acataccaat
     3421 gcttcaattt ttttccagta atataatcca ctagactata agaaagagaa aaattttgat
     3481 taaacacaaa tttcatgttt tcctactcta attggctttt atgtaaaaat acaggtaaaa
     3541 tttatttgtg cttttttgct atttctattt tgctattctc tgtttgtcta tgtcttctcc
     3601 acgttgacac aattagggaa ttttgtacac tcttgtgcca actgctttga tagtaacaaa
     3661 atgtatttct caaactccta ggtataaaac tcaagtatcc acaatttaag ttctttttcc
     3721 ctcatttcta ttatgtttcc agtctcaata gaaatcgatg ccaatccaga aatacaagca
     3781 ttattctaat acttctcaca cattacagat atagattaaa ttttctagat ctccttaaat
     3841 actatcattt ttcactactt gtatcttaac tgttaagttc aacattttct ataatattaa
     3901 tatattgtga aaatttcctt actttcttat ttgtcccagg ttcaatgttt tgcagtctct
     3961 acctcaccct gtgaagcata aacattgtac atgctgtaca aataatacat agttcatgtg
     4021 cttagagatt gcacaatttt tatttggttg acaatagcta atgttttctt cttcattttc
     4081 tatttcctga tttttcttta tttagcatat actacattat cataaaaata agaacgtgtt
     4141 acaaactaaa gcaaaagcaa ccctaggaat aaaatacaca aatgaaatat ataaacatac
     4201 aattagatgt accacgtacc cttctaattt atttagacat ttaattttag tacaatttta
     4261 attaaagtgt gtgtattatc tgtca
//
