LOCUS       XM_047446878            2306 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens collagen alpha-1(I) chain-like
            (LOC124908044), mRNA.
ACCESSION   XM_047446878
VERSION     XM_047446878.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..2306
                     /gene="LOC124908044"
                     /note="collagen alpha-1(I) chain-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 long SRA reads, and 93% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:124908044"
     CDS             1..1218
                     /gene="LOC124908044"
                     /codon_start=1
                     /product="collagen alpha-1(I) chain-like"
                     /protein_id="XP_047302834.1"
                     /db_xref="GeneID:124908044"
                     /translation="MRWGRRSGKPQRGNLREAGSGWDGRGNDQGLILFLALPPPKHQP
                     SGGGAVGGPSSGRVGDSGGARRRRGELQGFERKQSGGAGSVASPACGRPLSAQSPGAG
                     ERGLRPRPAPQNARGLISAPYPRIGPHPVACSEDPPGSGAPTRSSPQGEETGSREEGL
                     GGGVRDPGGAPHTLAHPERPAVDRGPPCRASAPAGDGAARLGPGAWLSGTTRLPSGMG
                     GRAGGRGREIRSHNIGLPPSPPQTFHRGWERRGQSRSLARIPAADRTARGTLAGAPLR
                     PRGCGAAGAVRPTPETLRSSRGGRRKDPRVQPSPPPRLPAPQPLSLPRPAAPAQAKGQ
                     SGGSGAPRLQPHASPASLTYCAQLQSPGAALAFGSDRRPPLPPRRRLPALARQPSAAS
                     LPPPLRPRPAPRP"
     polyA_site      2306
                     /gene="LOC124908044"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgcggtggg gtaggcggtc gggaaagccc caaaggggaa acctgaggga ggcaggaagt
       61 gggtgggatg ggcgtggaaa tgaccagggc ctcatcctgt tcctcgcact gcctcctccg
      121 aaacaccagc cctctggcgg aggggcggtg gggggaccga gctcgggtcg agtcggggac
      181 tccggcggcg cgcgcaggcg acggggggag ctccagggat ttgaacgcaa acaaagcggc
      241 ggcgcgggga gcgtggcgag cccggcctgc ggacgccccc tgtcggccca gagccccggc
      301 gcgggagagc gggggctgcg ccccagacca gccccccaaa acgcccgcgg cctcatctcg
      361 gctccttacc cgaggatcgg gccgcacccc gtggcgtgct ccgaggatcc gcccggcagc
      421 ggtgctccca cccgcagctc cccccagggc gaggaaacgg gcagccggga ggaggggttg
      481 gggggagggg tgcgggatcc aggcggggca ccccacaccc tcgcccaccc cgagcggcca
      541 gccgtggacc gcggccctcc ctgcagggcg agcgctccag ccggggacgg cgcggcccgg
      601 ctcggcccgg gggcctggct ttccgggaca acccgcctcc ccagcggaat gggcgggcgg
      661 gcggggggcc gcggcaggga aatccgatcc cacaacatcg gcctccctcc aagcccgccc
      721 caaactttcc atcgggggtg ggagcgccga gggcagtcca ggagcctggc gaggatcccg
      781 gccgcggacc ggaccgcgcg aggaaccctc gctggcgcgc ccctccggcc ccggggctgc
      841 ggggctgcag gtgctgtgcg ccccactccc gagaccctgc gaagcagccg cgggggtcgc
      901 aggaaggatc cccgcgtaca gccgtctccg ccgccgcggc tccccgcgcc ccagcccctg
      961 tccctcccgc gtccggcagc ccctgcccaa gcaaagggac aaagcggcgg ctccggggcc
     1021 ccgcggctcc agcctcacgc aagcccggcc tcgctcacct attgcgcgca gctccagtcc
     1081 ccgggcgccg ccctcgcgtt cggctctgac cgccgtccac ccctgccccc gcgtcgccgc
     1141 ctgcccgcgc tcgcccgcca gccctccgcg gcctctctgc caccgcccct ccgtccccgc
     1201 ccggctccgc gcccctaggc tcgggctccc cgcgccacca cggcgggcgc cggctctttc
     1261 tccagcgcgg ccgcggctct ccgccccctt ccccttgacg tcaggctggg ggggtcgagc
     1321 ggaggccggg ggcgggccgc gaaggctcgc tcaggagggg gctgcgaccc gcagcgacct
     1381 gtggacccgc ccgctctccg cccgggggct cggacctccg cctctctggg tgcccggacc
     1441 tcaacccctc cgggtgtcca gcagccccgg ggctcggagt cgcgggctgc gccacagcgc
     1501 ctggagggag gtggggcggg ggagggactc cgggtatggc cacgggggaa tcacactcac
     1561 ccgatctttc tgaagtgtcc cccgaagact ccgggcgggc tgggctgggg agagggactc
     1621 ccgaccgtgc agttgcagga acgaccgcgg gcgagccacg tcgaggcgag tatccagggg
     1681 aggcacgctg ggggaaccga ggcgtctttt ggggcggacc agaggggtct gccgtttggc
     1741 ccccaattct gcctctttct aggccccgag gaccactggt ccctgccctc aagtctggaa
     1801 agggcttcac cagccaggaa gacccttcaa tcaacagaaa gggcctgctc ctgcttctca
     1861 cgctttgggc aaagcgccta tccccagaaa atgactcctc gtgccactgg aaggctgatt
     1921 aacaagtggc atgagcccta ctgttcagat gaaaggggct gtggggagcc acgctgcaga
     1981 accaccgcca ccttcagaac caccagcctc cgcccacagc cactcctaga agcaacttgt
     2041 agctctggcc tcatgggcgg tgcagcgtct ttcctgccag ctggtcctct gagctgggca
     2101 ggtggttaga agaggtggtc ctcatggagg acaccccacg ggcacctgga gacagatgct
     2161 acctcctggc taggggcaaa aggcagaggt gaaggggctt gacgtcctga ggtttggagg
     2221 taactttaag ccagggtgca gtcctggagg ggaggaacac ttcaggctgc gtcagcagat
     2281 ctggattata aatcagtccg acagca
//
