LOCUS       XM_047449404            1581 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens Sjoegren syndrome nuclear autoantigen 1
            homolog (LOC124906236), transcript variant X1, mRNA.
ACCESSION   XM_047449404
VERSION     XM_047449404.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..1581
                     /gene="LOC124906236"
                     /note="Sjoegren syndrome nuclear autoantigen 1 homolog;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 35 long SRA reads, 5 Proteins, and 88%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:124906236"
     CDS             768..1151
                     /gene="LOC124906236"
                     /codon_start=1
                     /product="Sjoegren syndrome nuclear autoantigen 1 homolog"
                     /protein_id="XP_047305360.1"
                     /db_xref="GeneID:124906236"
                     /translation="MLTQQGMALQNYDNKLVKCIEELCQKQEELCWQIQQEEDKKQRL
                     QNEVRQLTEKLACVNEKLARVNENLARKIASCSKFYQTIAETEATYLKMLESSQTLLS
                     VLKREAGNLTKATASDQKSSGGRDS"
     polyA_site      1581
                     /gene="LOC124906236"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccaccatgc ctggccaatg tatttctatt tatttattta tccctcaaca gtcctccctc
       61 caatttaata tatttcttgg cagaggatag taaatgtttc catggatgga ttccttggtg
      121 gtggtgatgg tggtttgttt tttttttttt tttgaggcag agtcttgctc tgtcacccag
      181 gctggagtgc agtggcacga tctcggctca ctgcaacctc tgcctctcag gttcaagcga
      241 ttctcctgcc tcagcctcct gagcagctgg gattacgggt tcgtgccacc acgcccggct
      301 aattttttgt atttttagta gagatgggat ttcaccacgt tggccaggct ggtctcgaac
      361 tcctggcctc aggtgatcca cccgccttgg cgtcccagag tgctgggatt acaggcgtga
      421 gccaccacac ctggccggtt gtttatattt aattgtcttt ttttcactaa tgaggaccac
      481 cttgtaaatt ctgggcattt tcagagtttt ctcttccatg tgaattgctc cagctaactt
      541 aatattagtt tctcaagggt ttgtgtagac ctggctttgt ctctttccat ctgtttctct
      601 ctttcccttt aacgtcactt gcctgaggtc tataaggccc tttaaggttg ccagcccaga
      661 gccagaagag attggtgtcc ctgaagttaa gaaagccacc tttgcctaca gatggtgttc
      721 acagtgttgg tgtggagtca cagcttgact tttgggggcc ccaggagatg ttgacccagc
      781 agggcatggc gctgcagaac tacgacaaca agctggtcaa atgcatagag gagctatgcc
      841 agaagcagga ggagctgtgc tggcagatcc agcaggagga ggacaagaaa cagcggctgc
      901 agaatgaggt gaggcagctg acagagaagc tggcctgcgt caacgagaag ctggcccgcg
      961 tcaacgagaa cctggcacgc aagattgcct cttgcagtaa gttctaccag accatcgcgg
     1021 agacggaggc cacctacctc aagatgctgg agagctccca gactttgctc agtgtcctga
     1081 agagggaagc tgggaacctg accaaggcta cagcctcaga ccagaaaagt agtggtggca
     1141 gggacagctg accagaccat gggcagggcc tgcctctgtg cgcccctcaa ctcagcccca
     1201 gcaagtctgt ccacagagcg tcttcttcat ggcagcagct gccttctttc actgtctcag
     1261 gtgctaagag gggcagctgc caacctccac tggcatcagt gacaagcccg gggcacagcc
     1321 tgtgggtcct ggctttgtgc tcacacaggc tatggggagg gtgggctcta ggtcagctct
     1381 gcaaggggcc tgtctctgcg gcacccacac tcctgggctg ccagggaggt cctggttgta
     1441 gtctgagcac catggaggtc ccctcagcca gcagaggccc agggcagggg gcaggggttc
     1501 tccttcatcc cagaacccaa acctcagggc tcacccctgt ggcctgtgac tgtcaataaa
     1561 gattatcttt gtaaaaataa a
//
