LOCUS       XM_047433433             858 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens collagen alpha-1(I) chain-like
            (LOC124903575), mRNA.
ACCESSION   XM_047433433
VERSION     XM_047433433.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000015.10) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     gene            1..858
                     /gene="LOC124903575"
                     /note="collagen alpha-1(I) chain-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, and 75% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:124903575"
     CDS             1..783
                     /gene="LOC124903575"
                     /codon_start=1
                     /product="collagen alpha-1(I) chain-like"
                     /protein_id="XP_047289389.1"
                     /db_xref="GeneID:124903575"
                     /translation="MQRPTPPARGGRLIGCGTGGREGGLREGGEGRAAGPPHPAPPAA
                     PAGARAPAAPPACRGPSRRPRRALSRPGGCLWTSSPRSRRAPEVAGLGHPTRQGAEPR
                     GHGAPLPPRSRAGSPRGTCSPLPAAARRARPTSAGSRRSGMRALRRALRRARVGAPGG
                     AAPRRCARALLLGPAARSPLAGQTPAAPHPARARTAGGRTPAQPAWSLPGALGLRPRW
                     GRRRKQSAGPGRLSAEEPWRRWASDLRRRTPPSIPEPGGQLI"
     polyA_site      858
                     /gene="LOC124903575"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgcagcgcc ccacgcctcc cgcccgaggg ggccgcctaa ttggctgcgg gaccggagga
       61 agggagggcg ggctgcggga gggaggagag gggagggcgg ccggcccgcc tcaccccgcc
      121 ccgcccgccg cccctgcggg agcccgagcg ccggcggctc cacccgcgtg ccgcggaccg
      181 tcccggcgcc cgcgccgcgc gctctctcgc cccggaggct gcctgtggac gagctccccg
      241 aggagccgcc gggccccgga agtcgcaggg ctgggacacc cgacccggca gggagctgag
      301 ccgcggggcc acggcgcccc gctgcctccc cgaagtcggg cgggctcccc gcgcggcaca
      361 tgcagcccac tcccagccgc cgcacggcgc gctcgcccga cttcggccgg ctcgcggcgc
      421 tcgggaatgc gcgctctccg ccgggccctg cgccgcgccc gggtcggggc tcctggcggg
      481 gccgccccgc gtcgctgcgc acgtgccctg ctcttgggtc cagccgcccg atccccgcta
      541 gcaggacaga cgcccgctgc gccccaccct gcccgagcgc ggacagccgg cgggcgcacc
      601 ccggcccagc cggcctggag tctccccggg gccctggggc ttcgcccgcg gtggggcaga
      661 aggcgaaagc aaagcgccgg acccgggcgg ctctccgccg aggagccctg gcgccgctgg
      721 gcctctgacc ttcgcaggcg cacaccgcct tccatcccag agcccggggg gcaattgatc
      781 tgatttttta aatgcataaa ttatacctcg attaaaaaat gataattaaa aaaaagcaca
      841 tgagaccttt gctgctaa
//
