LOCUS       XM_047422506            2890 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens vegetative cell wall protein gp1
            (LOC124901868), mRNA.
ACCESSION   XM_047422506
VERSION     XM_047422506.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000008.11) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
     gene            1..2890
                     /gene="LOC124901868"
                     /note="vegetative cell wall protein gp1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 12 long SRA reads, and 71% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:124901868"
     CDS             1..963
                     /gene="LOC124901868"
                     /codon_start=1
                     /product="vegetative cell wall protein gp1"
                     /protein_id="XP_047278462.1"
                     /db_xref="GeneID:124901868"
                     /translation="MFITLRDCPTGICGQVNAQKGYLDASHIVSPPRRPAPGRRGLGS
                     DAQREGRAAAESRAEEESKASETRCDQRPPGQTSPVPAPSPRPRAAPRVAPPRPPRPE
                     LRLRPLPQGAANHAPGTLASGGGEDPRPAPDCWEAPRPPSSCSPLSASLPFLLLPTQL
                     RFLSTPSPLSPLRSLHPTFLLPYAVGPSPPFLSPTTSLSTPYRPSPLPHPVPSAPPPH
                     SGHPVPVPSSPLLRPSLLLLSPLLSHSVLPPPPHPARPLVPAPQCPGAGVTARPTSLP
                     ANRSSPPLGDAPPGNPVAGDARSSPWYVVTVRGPLRVRNPDPGV"
     polyA_site      2890
                     /gene="LOC124901868"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgttcatca ccctcagaga ttgccccact ggcatatgtg gacaagtcaa cgctcagaaa
       61 ggttacctcg acgcgtcaca catagtgtcc ccaccccgcc gccccgcccc tgggcgccgg
      121 ggactcggct cagacgcgca gagggaaggc agggcggctg cagagagcag agccgaagag
      181 gaatcgaaag cttcagaaac gcggtgtgac cagcgtcctc ctggacaaac ctccccggtc
      241 cccgcgccat cgccgcggcc acgagcagcg ccgcgggtcg ccccgcccag acctccgcgc
      301 ccggagctca ggctccgtcc tcttccccaa ggagctgcta atcacgcccc agggacgttg
      361 gcctctgggg gaggggagga ccctaggcct gcgcccgact gctgggaggc gccccgccct
      421 ccctcctcct gctcacccct ctcagcttct ctcccttttc ttctcctccc cactcagctc
      481 cgttttctct ccacacccag tcccttgtcc cctcttcgct cactccaccc cactttcctt
      541 cttccctacg cagtgggtcc ctctccccct ttcctctccc ctacaacctc cctctccact
      601 ccctaccggc cctctcccct cccccacccc gtaccctctg ccccgcctcc ccattcgggt
      661 caccccgtcc cagtcccctc ttctcccctc ctccgcccct ccctccttct cctctcccct
      721 ctcctgtccc actccgtcct cccccctcct ccgcaccccg cccgtcccct ggtccccgcc
      781 ccgcagtgtc ctggcgccgg cgtaaccgct cgtcccacct ccctcccagc caatcgctcc
      841 tctcctccgc tcggggacgc tcccccgggg aatcctgtgg ctggagatgc tcggtcgagt
      901 ccctggtatg tggtcaccgt gcgggggccg ctgcgggtgc ggaatccaga cccgggggtg
      961 tagcaacctc acaactccct gtgcagaaga aagcagaaga tcggggcgcg ggtccagggt
     1021 ggtccgcaca gccgtggttt agccgagggc ggcgcgctac acttagtctc ttgtgcagtg
     1081 ctttctggcc acagcagctt ccctagaagt gaccccactt gggtcagaac cacccagctg
     1141 ggccgctgat atttccccct ttcgcagagg gagcagcgcg cgtcgggaga cgcagtgact
     1201 cgccagggtc agacccagag cttcttcccc acgcaaggcc gagggcaggg tgagcacagg
     1261 ggcgttctcc gtctgccccg gctcgggtgc actggcctgg acgcctctgt gcaggttcca
     1321 tggtgtagag agacggctcg agtgcaggcg gagtttaagg gaagggggtt ttgactgcgg
     1381 gagccgacag aaaggactaa atccaaaagg tcctcttgga cctgaacctt ctgctacaag
     1441 cctgaccgat aaaaggggac tctgcatctt tttaagccca aaatagaaaa gccttgggag
     1501 ttagaatggc agaaacccca gaccgacggc gctggaagcg cgcagctcgg tgcattcccc
     1561 ggccgcactg ccctgcgggg ccgcgcacgt tccagcgctc agggacggtg ccgcaggaca
     1621 caccccaaac acagagcaca gacgaggtaa aaacgagccg gctgcaccag ggaccacgct
     1681 gcccctagct ggctctgccc cagcctctct gaacagcagg tccctgcgtc gaagcccgag
     1741 ggtcttcgca tttgctgctg tggcttctcc cggataccca cccccttcag atcttacaga
     1801 agggccttct tccaaaccag accttccctg ttccctggca actggtttta aaatcacagc
     1861 acctctgctc ctgcaattca cagtccctcc tcagtccctt cactgcttag tttttttttc
     1921 cttagccctt gccgcagtca aactcgaatg cgtttgtgaa tcacctgagg accttcctac
     1981 aacacagatg cgaattcact tggtcgaggg tgggtcccca agtttctaac gcgtgtccgt
     2041 gatattctgc tgctccccac ctgcctgcgg atctgcgagg acctttgact tacaaagggt
     2101 ccaacatgca gataatacaa aagtttattt ttcctatgta ttttggttta ccatcccccg
     2161 aacttgaatg tgagttccac caggatagag ctctggtctg ttttgtttgc tgctatattc
     2221 tctgtacctg gaacaggcct ggcacatagt aggagcacta tgttatttcc agaaggaagc
     2281 agtgaatgaa atacaaacca gaaaagacag cagaggtgat aaacctaaca ttatacaaag
     2341 tgaaagtcaa ggtgcaaatt atgaacgaaa caaaggtttt acactcattt ttaaaaggga
     2401 gaaataacag tcacaagccc ttaggtccta aagtaaaaac tgtctcccca aaaaaggaaa
     2461 attgcaaata ctacattgat tttagaaagg ttaactccca tcttggtcac atctcagaag
     2521 caaaaagtga cgtaaaagac ttgaataaag aaattaatgg ccaggcgtgg tggctcatgc
     2581 ctgtaatccc agcactttgg gaggccgagg tgggcagatc acttgacgtc aggagtttga
     2641 gaccagcctg ggcaacatgg ggtaaccccg cctccactaa aaacgtaaaa attagctggg
     2701 tgtggtatca ggcacctgta ataccagcta ctcaggaggc tgtggcaaga gaatcagttg
     2761 aacctgggag gcagaggttg cagtgaactg agattgtgcc acttcactcc agcctgggca
     2821 acagagtgag actcgtcaaa aaaaaaaaaa aaaaaaaaaa gaataaacag gacctgtgta
     2881 tttactagtt
//
