LOCUS       XM_047419609            1943 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens atherin-like (LOC124901227), mRNA.
ACCESSION   XM_047419609
VERSION     XM_047419609.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..1943
                     /gene="LOC124901227"
                     /note="atherin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 3 long SRA reads,
                     and 90% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:124901227"
     CDS             1..723
                     /gene="LOC124901227"
                     /codon_start=1
                     /product="atherin-like"
                     /protein_id="XP_047275565.1"
                     /db_xref="GeneID:124901227"
                     /translation="MVLAAAATARSAPPQLQPPPPRPLRAASAAGAAPSPRPRVAPGA
                     RPSAPPRLAVGGREHASDTPPPASGVPRSSTQGAAAGTKKSGEEHRRRREAGRGEGKR
                     SARPELCTPRLRILKMAAAEPPTSPSRGRHVTPVASARGGRSGRKGFSGEGSGFPGML
                     QASGLRGLETVRRCLRSFVPPLKPLNLGMDTKWLKTIRDNINGPVNVSCVGGYGPRQE
                     RPPKSCPQLKQHDPHQFTFQFA"
     polyA_site      1943
                     /gene="LOC124901227"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggttcttg cagcggcggc cacggctcgg agcgcgccgc cgcagctgca gccgccgcca
       61 cctcggccgc tgcgcgccgc ctcagccgcg ggagcagccc cctcccctcg gccccgcgtc
      121 gccccggggg cccggccgag cgcgcccccg cggctggcgg ttggagggcg cgagcacgcg
      181 tccgacacac ccccccccgc ctccggggtt ccccgctcct ccactcaggg agcggccgca
      241 ggaaccaaga aaagtgggga ggagcacaga cgccggcgcg aggctgggcg aggggagggg
      301 aagcgaagcg cgcgccctga gctctgcacg ccccgcctcc gaatcctcaa gatggcggcc
      361 gcagagccgc ccacttcccc ctcccgcggc cgccacgtga cccctgtggc ctccgcgcgg
      421 ggtgggcgga gcggaaggaa gggcttctct ggagagggat ctggttttcc ggggatgctc
      481 caggcctctg gacttagggg tttggagacc gtgcggaggt gtcttcgctc tttcgtgccg
      541 cccctcaagc ctcttaattt agggatggac acgaaatggt tgaaaaccat tcgtgataat
      601 ataaacgggc ctgtaaacgt tagctgtgtg ggaggttacg gaccccggca ggagcgccca
      661 ccgaaatcct gtccccagct gaagcaacac gacccgcatc agtttacttt ccagtttgcc
      721 taatttctag aggttgaaat tgaggatagg aaagtacgag gtggaggtgg tgggccagaa
      781 tcaaacccaa aatagacgtt gtcaggcctc tgagcccaag ctaagccatc atatccccta
      841 tgacctgcac gtatacatcc agatggcctg aggcaactga agagccacaa aagaagtgaa
      901 aatagcctta actgatgaca ttccaccatt gtgatttgtt cctgccccac cctaactgac
      961 aggatatatt ctcccccttg cccttaagta ggtgctttgt aatattctcc cccgccctta
     1021 agaatgtact ttgtacacct atcccaaacc tataagaact aatgataatt ccaccaccct
     1081 ctgctgactc ctttttcgga ctcaacccgc ctgcacccag gtaagataaa cagccttgtt
     1141 gctcacacga agcctgtttg gtggactctc ttcacacgtt ttcgagctgt tttctgacta
     1201 aagtacttgt ggtcatggtg gaggtccttc attaccaggg gcccacatca tgaccaactg
     1261 gaggcgtggc aagtttttgt aagagatcca ggcatgcccc ctcccctggc ctaagtccag
     1321 aattttccta gatgccaatc tcagggccct gcatcctaaa tacaaaagtg ggccaggcgc
     1381 aaagggtcac gcctataatc ccaccatttt gggaggccgg ggcaggagga ttgcttgagc
     1441 ctgagagttc gagaccagcc tgggcaacgt agaaggacct ccatttctaa aaaaaaaaaa
     1501 aaaaaatttg ccgagtgtgg tggcacgttc ctgtacccca gctactcggg aggttgaggc
     1561 tgcggtgagc tgtgatcatg ccactgcact ccagcctggg tgacagagtg agaccctctc
     1621 tcaaaaaata catccatata tatatatatc catttccata cgttcttata atggcatata
     1681 ctcagtaaaa atgtataaaa tttttactag ttgactactt ttacccagct tcacatttta
     1741 tataatttat ataaaataag aaaccaataa cattttaatg aaaaaaataa taaaaatatg
     1801 ccagaggtgt atgccctgtc tttattagag tatatatgga ttttggttac ccatactttt
     1861 ggtgggactt aataaatgtg aaaaaaatgt aaatcagtgt gtatagatac ttggagtcaa
     1921 taaattttaa atcatgtttg tta
//
